CX043273
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043273 vs. ExPASy Swiss-Prot
Match: EI3F2_DROPS (Eukaryotic translation initiation factor 3 subunit F-2 OS=Drosophila pseudoobscura pseudoobscura GN=eIF3-S5-2 PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 2.007e-15 Identity = 53/209 (25.36%), Postives = 100/209 (47.85%), Query Frame = -1 Query: 240 IEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPN--PVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDL-----RMIEAERVGFDILKST-SVDKLPSDLEGMEVLMERLLTLINDIYKYVDDTVEGHAVPDNSVGRILSETVASLPKLSPPAFDKLVNXXXXXXXXXXXXXSITRTQLSLAEKLN 842 ++Y + ML+ PQE ++GWFSTG V+ + +HE+Y R+ N P+HL +DT R + + +V + F +P+D+ ++ +G + T +L +LE + + + ++ + +Y++D + PDN+VGR L + + S+P + F + N S+ +TQL L+E+L+ Sbjct: 75 LKYDNDMLELAQIAYPQEKVLGWFSTGKSVSAAAVELHEYYERQCHNGQPLHLLMDTSLRGQRMNTRIFCAVATGVPGGTKGLMFSLLPMDIYFGSPDIVAMRHMGRQCAQPTKDAGRLLPELEQVVDATKDIQQKLDLVLRYINDILNRKRRPDNTVGRALHDVLTSVPMVEAERFRHMFNTNMRDLLMSLTLSSMIKTQLQLSERLS 283
BLAST of CX043273 vs. ExPASy Swiss-Prot
Match: EI3F2_DROME (Eukaryotic translation initiation factor 3 subunit F-2 OS=Drosophila melanogaster GN=eIF3-S5-2 PE=3 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 2.007e-15 Identity = 50/208 (24.04%), Postives = 96/208 (46.15%), Query Frame = -1 Query: 240 YHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREV--PNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIEAERVGFDILKSTSVDKLPSDLEGMEVLMERLLTLIND-------IYKYVDDTVEGHAVPDNSVGRILSETVASLPKLSPPAFDKLVNXXXXXXXXXXXXXSITRTQLSLAEKLN 836 Y +L+ ++ P E ++GWF TG V+ ++LIH++Y RE P+HL VD +N + + Y +V + + F +PL++ ++ V ++ S + +E + +++ D + +Y++D + PDN VGR L + ++P L F + N ++ +TQL ++EKL+ Sbjct: 73 YASEVLELNMFAYPNERVLGWFCTGKSVSRSASLIHDYYVRECCEGQPLHLLVDAALKNQRLSTRLYCAVEMGVPGGTKGLMFSLVPLEISNENSDLVALRCIEKQSQQQASKQMERFVPELAQVVDATRDMQHRLDLVLRYINDVLARKKKPDNVVGRSLYAALTAVPLLDSDKFRVMFNTNLRDMLMAITLSTMIKTQLEISEKLS 280
BLAST of CX043273 vs. ExPASy Swiss-Prot
Match: EI3F2_DROYA (Eukaryotic translation initiation factor 3 subunit F-2 OS=Drosophila yakuba GN=eIF3-S5-2 PE=3 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 1.301e-14 Identity = 51/213 (23.94%), Postives = 98/213 (46.01%), Query Frame = -1 Query: 240 IEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVP--NPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIEAERVGFDILKSTSVDKLPSDLEGMEVLMERLLTLIND----------IYKYVDDTVEGHAVPDNSVGRILSETVASLPKLSPPAFDKLVNXXXXXXXXXXXXXSITRTQLSLAEKLN 842 I Y L+ ++ E ++GWFSTG V+ ++L+H++Y RE PVHL +D ++ + + Y +V + + F +PL++ ++ V L+S L + ME + L+ +++ + +Y++D + PDN +GR L + ++P L F + N ++ +TQL ++EKL+ Sbjct: 71 ISYASEFLELNMLTYSNERVLGWFSTGKSVSRSASLLHDYYARECGEIQPVHLVMDATLKSQRLSTRLYCAVEIGVPGGTKGLMFSLVPLEISNGNSDLVA---LRSLEKQSLQQGTKQMERFLPELVQVVDATRDIQQRLDLVLRYINDVLARKRKPDNVIGRALYAALTAVPLLDSEKFRLMFNTNLRDMLMAITLSTMIKTQLEISEKLS 280
BLAST of CX043273 vs. ExPASy Swiss-Prot
Match: EI3F2_DROSE (Eukaryotic translation initiation factor 3 subunit F-2 OS=Drosophila sechellia GN=eIF3-S5-2 PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.301e-14 Identity = 49/208 (23.56%), Postives = 95/208 (45.67%), Query Frame = -1 Query: 240 YHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREV--PNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIEAERVGFDILKSTSVDKLPSDLEGMEVLMERLLTLINDI-------YKYVDDTVEGHAVPDNSVGRILSETVASLPKLSPPAFDKLVNXXXXXXXXXXXXXSITRTQLSLAEKLN 836 Y +L+ ++ P E ++GWF TG V+ ++LIH++Y RE P+HL VD +N + + Y +V + + F +PL++ ++ V ++ S + +E + +++ +I +Y++D + PDN VGR L + ++P F + N ++ +TQL ++EKL+ Sbjct: 73 YASEVLELNMFAYPNERVLGWFCTGKSVSRSASLIHDYYVRECGERQPLHLLVDASLKNQRLSTRLYCAVEMGVPGGTKGLMFSLVPLEISSENSDLVAVRCIEKQSQQQASKQMERFVPELVQVVDATRNIQQRLDLLLRYINDVLARKKKPDNLVGRSLQAALTAVPLFDSEKFRLMFNTNVRDMLMAITLSTMIKTQLEISEKLS 280
BLAST of CX043273 vs. ExPASy Swiss-Prot
Match: EI3F2_DROPE (Eukaryotic translation initiation factor 3 subunit F-2 OS=Drosophila persimilis GN=eIF3-S5-2 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.219e-14 Identity = 52/209 (24.88%), Postives = 96/209 (45.93%), Query Frame = -1 Query: 240 IEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPN--PVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIEAERVGFD------ILKSTSVDKLPSDLEGMEVLMERLLTLINDIYKYVDDTVEGHAVPDNSVGRILSETVASLPKLSPPAFDKLVNXXXXXXXXXXXXXSITRTQLSLAEKLN 842 ++Y + ML+ PQE +VGWFSTG V+ + +HE+Y R+ + P+HL +DT R + + +V + F +P+D+ + V L +L +LE + + + ++ + +Y++D + PDN+VGR L + + S+P + F + N S+ + QL L+E+L+ Sbjct: 75 LKYDNDMLELAQIAYPQEKVVGWFSTGKAVSAAAVELHEYYERQCHSGQPLHLLMDTSLRGQRMNTRIFCAVATGVPGGTKGLMFSLLPMDIYFGSPDIVAMRHMGRQCALPPKEAGRLLPELEQVVDATKDIQQKLDLVLRYINDILNRKRRPDNTVGRALHDVLTSVPMVEAERFRHMFNTNMRDLLMSLTLSSMIKVQLQLSERLS 283
BLAST of CX043273 vs. ExPASy Swiss-Prot
Match: EI3F2_DROGR (Eukaryotic translation initiation factor 3 subunit F-2 OS=Drosophila grimshawi GN=eIF3-S5-2 PE=3 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 3.786e-14 Identity = 55/210 (26.19%), Postives = 99/210 (47.14%), Query Frame = -1 Query: 240 EYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPN--PVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIEAE-RVGFDILKSTSVDK-------LPSDLEGMEVLMERLLTLINDIYKYVDDTVEGHAVPDNSVGRILSETVASLPKLSPPAFDKLVNXXXXXXXXXXXXXSITRTQLSLAEKLN 839 +Y M + + NPQE IVGW++T ++ SA +H +Y RE + P+HL VD R G + Y V + + F +PL E + V ++++ +++ LP + +E+ + L ++ + +Y+ D + +PD VGR L E + S+P + +F + N ++ +TQL L+EKL+ Sbjct: 77 QYASEMYELNQINNPQEKIVGWYNTAKSLSRSSAALHAYYARECADAQPLHLLVDLKLRGGRLNTRLYCGVPIGVPGGTKGLMFTLLPLLKMGTEIDDSVALRVMQNYALNPAKQPGRILPELMSVLEITLA-LEEKLDLLLRYIKDVLARKRLPDKRVGRALYEALTSVPMMDAESFRLMFNTNVRDILLSITLSTMIKTQLELSEKLS 285
BLAST of CX043273 vs. ExPASy Swiss-Prot
Match: PSD7_DICDI (26S proteasome non-ATPase regulatory subunit 7 OS=Dictyostelium discoideum GN=psmD7 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.591e-12 Identity = 43/174 (24.71%), Postives = 84/174 (48.28%), Query Frame = -1 Query: 330 YHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSV-NLSLGDRQLAAQFQEIPLDLRMIEAERVGFDIL----KSTSVDKLPSDLEGMEVLMERLLTLINDIYKYVDDTVEGHAVPDNSVGRILSETVASLPKLSPPAFDK 836 +H M K+N +E +VGW+STG + I+E + R PNPV + +D + K+YV+V ++ + +FQ IP + +EAE + + L K +S+ L + + ++ ++ LLT + ++ Y+ +G P++ + + + + P L+ K Sbjct: 72 FHENMFAMFKKINARENVVGWYSTGPKIRPADQDINELFRRYTPNPVMVIIDVAPKELGIPTKSYVTVEEINKDTSESTMRFQHIPSSIDAVEAEEICIEHLLRDVKDSSISSLTTQITDKKISLKHLLTNLQEMQHYLKLVCDGTLPPNHQIIGYIQDIINLSPNLNANEISK 245
BLAST of CX043273 vs. ExPASy Swiss-Prot
Match: EIF3F_CRYNE (Eukaryotic translation initiation factor 3 subunit F OS=Cryptococcus neoformans GN=CNF04540 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.077e-12 Identity = 51/160 (31.87%), Postives = 80/160 (50.00%), Query Frame = -1 Query: 375 YHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREV-PNP-VHLTVDTGF-RNGEGT-VKAYVSVNLSLGDRQLAAQFQEIPLDLRMIEAERVGFDILKSTSVDKLPS--DLEGMEVLMERLLTLINDIYKYVDDTVEGHAVPDNSVGRILSE 836 + M+ K +EVIVGW+++ V SA+I E++ E P P VHLTVDT +G+G VK +VS L L + + F +P+ ++ ++ER D+L + P+ L + + +L +LI+ YV G PD +GR L E Sbjct: 91 FQQDMVNFLAKNGTKEVIVGWYASQKTVNSNSAIIQEYFSFETNPYPAVHLTVDTDIEESGKGLGVKGWVSQPLGLTSKSECSVFVPVPVSIKYADSERAALDLLTAPQPTPSPALPPLPTLSNSLSQLSSLIDQCLAYVQSVNNGSQTPDVEIGRYLLE 250
BLAST of CX043273 vs. ExPASy Swiss-Prot
Match: EIF3F_YARLI (Eukaryotic translation initiation factor 3 subunit F OS=Yarrowia lipolytica GN=YALI0E26851g PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.713e-12 Identity = 55/213 (25.82%), Postives = 94/213 (44.13%), Query Frame = -1 Query: 237 IEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNP-VHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRM---IEAERVGFDILKSTSVD-----KLPSDLEGMEVLMERLLTLINDIYKYVDDTVEGHAVPDNS--VGRILSETVASLPKLSPPAFDKLVNXXXXXXXXXXXXXSITRTQLSLAEKLNT 842 +EY+ TML H K P+EVIVGW++T + S LIH++Y + P +HLTV+ + YV+ + + + + +P+ + A+R + + S L SDL +E + ++L ++ + YV + G + + VG+ L T+ P L + L N + +TQL L+ KL T Sbjct: 80 LEYNPTMLALHRKAFPKEVIVGWYATSSELNTFSGLIHDYYTQLDGTPAIHLTVEAANLADTLLPRTYVASAVGIDPSKNSGNCVFVPISNEVKFNDSADRAALEAISSARESPERSINLTSDLANLENSLTQVLDMLERVQTYVARVISGEESSEKAQQVGKQLLSTLTLTPSLDAQNLEALFNSHLQDVLMVVYLANTVKTQLQLSAKLTT 292
BLAST of CX043273 vs. ExPASy Swiss-Prot
Match: EIF3F_NEUCR (Eukaryotic translation initiation factor 3 subunit F OS=Neurospora crassa GN=1A9.200 PE=3 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 2.713e-12 Identity = 55/215 (25.58%), Postives = 101/215 (46.98%), Query Frame = -1 Query: 234 IEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCR----EVPNP-VHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQ--FQEIPLDLRMIEAERVGFDILKSTSVDK-----LPSDLEGMEVLMERLLTLINDIYKYVDDTVEGHAVPDNSVGRILSETVASLPKLSPPAFDKLVNXXXXXXXXXXXXXSITRTQLSLAEKLNTA 842 +EY ML LK NP+E ++GW++T + SALI F+ P+P VHLT+ T K Y+S +++ + A F E+P L +AER + + + + + SD+E + +E + L+ + +V + ++ ++++G+ L ++ PK+S A + N + RTQ+ L+++L TA Sbjct: 94 VEYQKNMLALTLKANPRETLLGWYTTSHELNSFSALIQNFFASPETGTFPHPAVHLTIGTE-AGATIDTKTYISAPVAVSPERAAESCLFIEVPHKLLFTDAERGALGSVAAAADAESRSAPVVSDIENLAQALETVSDLLERVSGFVGEVLDEERDGNHALGQYLMNALSLAPKVSNLAIENDFNNHIQDVLMVSYLANTIRTQIELSQRLATA 307 The following BLAST results are available for this feature:
BLAST of CX043273 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043273 ID=CX043273; Name=CX043273; organism=Citrus sinensis; type=EST; length=842bpback to top |