CV885603
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV885603 vs. ExPASy Swiss-Prot
Match: RS7_DICDI (40S ribosomal protein S7 OS=Dictyostelium discoideum GN=rps7 PE=3 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 3.558e-47 Identity = 100/184 (54.35%), Postives = 132/184 (71.74%), Query Frame = 3 Query: 81 KKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQ---RPRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGKDVVFDY 623 KKI K TEFE TVAQAL DLEN N ELK DLKDL + ++DV+ ++KA+V++VP+R K Y KI +L E+EKK GK V+ IA RRI+R P + ++ RP SRT+ AVHDA+L+D+V+P IVG+R+RYRLDGSK+ KI+LD KE + K++SFS VY KLTGK+VVF++ Sbjct: 4 KKIIKPAGKVATEFENTVAQALVDLENNNAELK-DLKDLSVCSVKEVDVAESKKAVVIFVPFRQLKNYNKIQQKLTYEVEKKLGGKQVMFIAQRRIIRKPASNNKIKMQKRPISRTIKAVHDAILDDLVFPNTIVGRRLRYRLDGSKLHKIYLDRKEMLSNISKVDSFSAVYHKLTGKEVVFEF 186
BLAST of CV885603 vs. ExPASy Swiss-Prot
Match: RS7_SPOFR (40S ribosomal protein S7 OS=Spodoptera frugiperda GN=RpS7 PE=2 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 1.035e-46 Identity = 96/185 (51.89%), Postives = 140/185 (75.68%), Query Frame = 3 Query: 84 KIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAV----QRPRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGKDVVFDYP 626 KI K AEP FE +++QAL +LE TN +LK+ L++LYI +A ++++ N+K+I++YVP KA++KI RLVRELEKKFSGK VV I R+I+ P + V +RPRSRTLT+V+DA+LED+V+PAEIVGKR+R +LDGS++IK+ LD ++ E+K+++F VY+KLTG++V F++P Sbjct: 4 KIIKASAAEPDVFETSISQALVELE-TNSDLKAQLRELYITKAKEIELH-NKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFIGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGKRIRIKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFP 186
BLAST of CV885603 vs. ExPASy Swiss-Prot
Match: RS7_CAEEL (40S ribosomal protein S7 OS=Caenorhabditis elegans GN=rps-7 PE=2 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 2.306e-46 Identity = 94/186 (50.54%), Postives = 134/186 (72.04%), Query Frame = 3 Query: 84 KIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQ-----RPRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGKDVVFDYP 626 K+ K +E E+ V+QAL DLE TN +++S LK+LYI ++++ GN+ AI++YVP KA+ KIH LVRELEKKF G+D++++A RRI+ P++GS + RPRSRTLTAVHDA L+++VYPAE+VG+R+R +LDG K+ K+ LD + N +K+ F+ VYRKLTGKDV F++P Sbjct: 7 KLLKSDGKVVSEIEKQVSQALIDLE-TNDDVQSQLKELYIVGVKEVEL-GNKSAIIIYVPVPQLKAFHKIHPALVRELEKKFGGRDILILAKRRILPKPQRGSKARPQKQKRPRSRTLTAVHDAWLDELVYPAEVVGRRIRVKLDGKKVYKVHLDKSHQTNVGHKIGVFASVYRKLTGKDVTFEFP 190
BLAST of CV885603 vs. ExPASy Swiss-Prot
Match: RS7_DROME (40S ribosomal protein S7 OS=Drosophila melanogaster GN=RpS7 PE=2 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 6.710e-46 Identity = 93/185 (50.27%), Postives = 142/185 (76.76%), Query Frame = 3 Query: 84 KIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSA----VQRPRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGKDVVFDYP 626 KI K ++P +FE+++AQAL +LE N +LK L+DL+I +A +++ G++KA+++YVP +K ++KI LVRELEKKFSGK VV+IA R+I+ P + + +RPRSRTLTAV+DA+LED+V+PAEIVGKR+R +LDGS+++K+ LD ++ E+K+++F+ VY+KLTG+DV F++P Sbjct: 6 KIIKPGGSDPDDFEKSIAQALVELE-ANSDLKPYLRDLHITRAREIEF-GSKKAVIIYVPIPQQKVFQKIQIILVRELEKKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTAVYDAILEDLVFPAEIVGKRIRVKLDGSQLVKVHLDKNQQTTIEHKVDTFTSVYKKLTGRDVTFEFP 188
BLAST of CV885603 vs. ExPASy Swiss-Prot
Match: RS7_MANSE (40S ribosomal protein S7 OS=Manduca sexta GN=RpS7 PE=2 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 1.495e-45 Identity = 94/185 (50.81%), Postives = 138/185 (74.59%), Query Frame = 3 Query: 84 KIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAV----QRPRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGKDVVFDYP 626 KI K E FE +++QAL +LE TN +LK+ L++LYI +A ++++ N+K+I++YVP KA++KI RLVRELEKKFSGK VV I R+I+ P + V +RPRSRTLT+V+DA+LED+V+PAEIVGKR+R +LDGS++IK+ LD ++ E+K+++F VY+KLTG++V F++P Sbjct: 4 KILKAGGTEADSFETSISQALVELE-TNSDLKAQLRELYITKAKEIELH-NKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFIGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFP 186
BLAST of CV885603 vs. ExPASy Swiss-Prot
Match: RS7_DROYA (40S ribosomal protein S7 OS=Drosophila yakuba GN=RpS7 PE=2 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.952e-45 Identity = 92/185 (49.73%), Postives = 141/185 (76.22%), Query Frame = 3 Query: 84 KIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSA----VQRPRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGKDVVFDYP 626 KI K ++P +FE+++AQAL +LE N +LK L+DL+I +A +++ G++KA+++YVP +K ++KI LVRELEKKFSGK VV+I R+I+ P + + +RPRSRTLTAV+DA+LED+V+PAEIVGKR+R +LDGS+++K+ LD ++ E+K+++F+ VY+KLTG+DV F++P Sbjct: 6 KIIKPGGSDPDDFEKSIAQALVELE-ANSDLKPYLRDLHITRAREIEF-GSKKAVIIYVPIPQQKVFQKIQIILVRELEKKFSGKHVVVIGERKILPKPTRKARNPLKQKRPRSRTLTAVYDAILEDLVFPAEIVGKRIRVKLDGSQLVKVHLDKNQQTTIEHKVDTFTSVYKKLTGRDVTFEFP 188
BLAST of CV885603 vs. ExPASy Swiss-Prot
Match: RS7_NEUCR (40S ribosomal protein S7 OS=Neurospora crassa GN=rps-7 PE=3 SV=2) HSP 1 Score: 181.415 bits (459), Expect = 5.680e-45 Identity = 89/182 (48.90%), Postives = 131/182 (71.98%), Query Frame = 3 Query: 111 PTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQ------RPRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGKDVVFDYPITDA 638 P+E E VA AL+DLE+ +LK+ L+ L A +++V +KAIV++VP + + ++ RL RELEKKFS + V+++A+RRI+ PK+ S + RPRSRTLTAVHDA+L D+VYP EIVGKR+R + DGSK +K+ LD KER + +Y+L+++S VYR+LTGK+V+F++P+ A Sbjct: 19 PSELETAVAGALYDLESNTADLKAALRPLQFVSAREIEVGHGKKAIVIFVPVPSLQGFHRVQQRLTRELEKKFSDRHVLIVASRRILPRPKRSSRSRNTLKQKRPRSRTLTAVHDAILTDLVYPVEIVGKRLRVKEDGSKTLKVILDEKERGSVDYRLDTYSAVYRRLTGKNVLFEFPLVSA 200
BLAST of CV885603 vs. ExPASy Swiss-Prot
Match: RS7B_YEAST (40S ribosomal protein S7-B OS=Saccharomyces cerevisiae GN=RPS7B PE=1 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 2.158e-44 Identity = 90/174 (51.72%), Postives = 123/174 (70.69%), Query Frame = 3 Query: 111 PTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGS--AVQRPRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGKDVVFDYP 626 P+E E VA+ DLE+++ ELK+DL+ L I ++DV+G +KA+V++VP AY K+ ++L RELEKKF + V+ +A RRI+ P + S +RPRSRTLTAVHD +LED+V+P EIVGKRVRY + G+KI K+ LD K+ +YKLESF VY KLTGK +VF+ P Sbjct: 13 PSELELQVAKTFIDLESSSPELKADLRPLQIKSIREIDVTGGKKALVLFVPVPALSAYHKVQTKLTRELEKKFPDRHVIFLAERRILPKPSRTSRQVQKRPRSRTLTAVHDKVLEDMVFPTEIVGKRVRYLVGGNKIQKVLLDSKDVQQIDYKLESFQAVYNKLTGKQIVFEIP 186
BLAST of CV885603 vs. ExPASy Swiss-Prot
Match: RS7A_YEAST (40S ribosomal protein S7-A OS=Saccharomyces cerevisiae GN=RPS7A PE=1 SV=4) HSP 1 Score: 176.792 bits (447), Expect = 1.399e-43 Identity = 88/174 (50.57%), Postives = 121/174 (69.54%), Query Frame = 3 Query: 111 PTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGS--AVQRPRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGKDVVFDYP 626 PTE E VAQA +LEN++ ELK++L+ L ++DV+G +KA+ ++VP + K+ ++L RELEKKF + V+ +A RRI+ P + S +RPRSRTLTAVHD +LED+V+P EIVGKRVRY + G+KI K+ LD K+ +YKLESF VY KLTGK +VF+ P Sbjct: 13 PTELELQVAQAFVELENSSPELKAELRPLQFKSIREIDVAGGKKALAIFVPVPSLAGFHKVQTKLTRELEKKFQDRHVIFLAERRILPKPSRTSRQVQKRPRSRTLTAVHDKILEDLVFPTEIVGKRVRYLVGGNKIQKVLLDSKDVQQIDYKLESFQAVYNKLTGKQIVFEIP 186 The following BLAST results are available for this feature:
BLAST of CV885603 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV885603 ID=CV885603; Name=CV885603; organism=Citrus sinensis; type=EST; length=866bpback to top |