CV885543

Overview
NameCV885543
Unique NameCV885543
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length921
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885543 vs. ExPASy Swiss-Prot
Match: URK_STAAB (Uridine kinase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=udk PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.858e-19
Identity = 53/160 (33.12%), Postives = 94/160 (58.75%), Query Frame = 3
Query:  315 LVGVAGPSGAGKTVFTEKVLNFMP--SIAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSEK-LRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETV 767
            ++G+AG SG+GKT  T +++  +   S+A++  D Y  D   +     ++ N+D P   D D L+EN++ LK GKAV+VP YD+ S +R    T++     ++I+EGI+AL  K LR ++D+++ V       +++R+ RD +  G+  + +I+Q    V
Sbjct:    6 IIGIAGGSGSGKTTVTNEIMKNLEGHSVALLAQDYYYKDQKHLTFDERLETNYDHPFAFDNDLLIENLKDLKNGKAVEVPTYDYASHTRSDI-TIDFKPKDVIIVEGIFALENKVLRDMMDVKIYVDTDADLRILRRLTRDTKERGRSMDSVINQYLSVV 164          
BLAST of CV885543 vs. ExPASy Swiss-Prot
Match: URK_STAA9 (Uridine kinase OS=Staphylococcus aureus (strain JH9) GN=udk PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.858e-19
Identity = 53/160 (33.12%), Postives = 94/160 (58.75%), Query Frame = 3
Query:  315 LVGVAGPSGAGKTVFTEKVLNFMP--SIAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSEK-LRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETV 767
            ++G+AG SG+GKT  T +++  +   S+A++  D Y  D   +     ++ N+D P   D D L+EN++ LK GKAV+VP YD+ S +R    T++     ++I+EGI+AL  K LR ++D+++ V       +++R+ RD +  G+  + +I+Q    V
Sbjct:    6 IIGIAGGSGSGKTTVTNEIMKNLEGHSVALLAQDYYYKDQKHLTFDERLETNYDHPFAFDNDLLIENLKDLKNGKAVEVPTYDYASHTRSDI-TIDFKPKDVIIVEGIFALENKVLRDMMDVKIYVDTDADLRILRRLTRDTKERGRSMDSVINQYLSVV 164          
BLAST of CV885543 vs. ExPASy Swiss-Prot
Match: URK_STAA8 (Uridine kinase OS=Staphylococcus aureus (strain NCTC 8325) GN=udk PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.858e-19
Identity = 53/160 (33.12%), Postives = 94/160 (58.75%), Query Frame = 3
Query:  315 LVGVAGPSGAGKTVFTEKVLNFMP--SIAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSEK-LRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETV 767
            ++G+AG SG+GKT  T +++  +   S+A++  D Y  D   +     ++ N+D P   D D L+EN++ LK GKAV+VP YD+ S +R    T++     ++I+EGI+AL  K LR ++D+++ V       +++R+ RD +  G+  + +I+Q    V
Sbjct:    6 IIGIAGGSGSGKTTVTNEIMKNLEGHSVALLAQDYYYKDQKHLTFDERLETNYDHPFAFDNDLLIENLKDLKNGKAVEVPTYDYASHTRSDI-TIDFKPKDVIIVEGIFALENKVLRDMMDVKIYVDTDADLRILRRLTRDTKERGRSMDSVINQYLSVV 164          
BLAST of CV885543 vs. ExPASy Swiss-Prot
Match: URK_STAA3 (Uridine kinase OS=Staphylococcus aureus (strain USA300) GN=udk PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.858e-19
Identity = 53/160 (33.12%), Postives = 94/160 (58.75%), Query Frame = 3
Query:  315 LVGVAGPSGAGKTVFTEKVLNFMP--SIAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSEK-LRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETV 767
            ++G+AG SG+GKT  T +++  +   S+A++  D Y  D   +     ++ N+D P   D D L+EN++ LK GKAV+VP YD+ S +R    T++     ++I+EGI+AL  K LR ++D+++ V       +++R+ RD +  G+  + +I+Q    V
Sbjct:    6 IIGIAGGSGSGKTTVTNEIMKNLEGHSVALLAQDYYYKDQKHLTFDERLETNYDHPFAFDNDLLIENLKDLKNGKAVEVPTYDYASHTRSDI-TIDFKPKDVIIVEGIFALENKVLRDMMDVKIYVDTDADLRILRRLTRDTKERGRSMDSVINQYLSVV 164          
BLAST of CV885543 vs. ExPASy Swiss-Prot
Match: URK_STAA2 (Uridine kinase OS=Staphylococcus aureus (strain JH1) GN=udk PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.858e-19
Identity = 53/160 (33.12%), Postives = 94/160 (58.75%), Query Frame = 3
Query:  315 LVGVAGPSGAGKTVFTEKVLNFMP--SIAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSEK-LRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETV 767
            ++G+AG SG+GKT  T +++  +   S+A++  D Y  D   +     ++ N+D P   D D L+EN++ LK GKAV+VP YD+ S +R    T++     ++I+EGI+AL  K LR ++D+++ V       +++R+ RD +  G+  + +I+Q    V
Sbjct:    6 IIGIAGGSGSGKTTVTNEIMKNLEGHSVALLAQDYYYKDQKHLTFDERLETNYDHPFAFDNDLLIENLKDLKNGKAVEVPTYDYASHTRSDI-TIDFKPKDVIIVEGIFALENKVLRDMMDVKIYVDTDADLRILRRLTRDTKERGRSMDSVINQYLSVV 164          
BLAST of CV885543 vs. ExPASy Swiss-Prot
Match: URK_STAA1 (Uridine kinase OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=udk PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.858e-19
Identity = 53/160 (33.12%), Postives = 94/160 (58.75%), Query Frame = 3
Query:  315 LVGVAGPSGAGKTVFTEKVLNFMP--SIAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSEK-LRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETV 767
            ++G+AG SG+GKT  T +++  +   S+A++  D Y  D   +     ++ N+D P   D D L+EN++ LK GKAV+VP YD+ S +R    T++     ++I+EGI+AL  K LR ++D+++ V       +++R+ RD +  G+  + +I+Q    V
Sbjct:    6 IIGIAGGSGSGKTTVTNEIMKNLEGHSVALLAQDYYYKDQKHLTFDERLETNYDHPFAFDNDLLIENLKDLKNGKAVEVPTYDYASHTRSDI-TIDFKPKDVIIVEGIFALENKVLRDMMDVKIYVDTDADLRILRRLTRDTKERGRSMDSVINQYLSVV 164          
BLAST of CV885543 vs. ExPASy Swiss-Prot
Match: URK_STAHJ (Uridine kinase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=udk PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.226e-18
Identity = 52/160 (32.50%), Postives = 93/160 (58.13%), Query Frame = 3
Query:  315 LVGVAGPSGAGKTVFTEKVLNFMP--SIAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSEK-LRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETV 767
            ++G+AG SG+GKT  T +++  +   S+A++  D Y  D S +     ++ N+D P   D D L+EN++ L+ G AV+VP YD+ + +R    T+      ++I+EGI+AL  K LR ++D+++ V       +++R+ RD +  G+  E +I+Q    V
Sbjct:    6 IIGIAGGSGSGKTTVTNEIMKNLEGHSVALLAQDYYYKDQSHLTFEERLETNYDHPFAFDNDLLIENLKDLRNGHAVEVPTYDYTNHTR-SNETIAFEPKDVIIVEGIFALENKTLRDMMDVKIYVDTDADLRILRRLVRDTKERGRSMESVINQYLNVV 164          
BLAST of CV885543 vs. ExPASy Swiss-Prot
Match: URK_STAS1 (Uridine kinase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=udk PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.797e-18
Identity = 52/160 (32.50%), Postives = 92/160 (57.50%), Query Frame = 3
Query:  315 LVGVAGPSGAGKTVFTEKVLNFMP--SIAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSEK-LRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETV 767
            ++G+AG SG+GKT  T +++  +   S+A++  D Y  D S +     ++ N+D P   D D L++N+  L+ GK V+VP YD+ + +R    T+      ++I+EGI+AL  K LR L+D+++ V       +++R+ RD +  G+  E +I+Q    V
Sbjct:    6 IIGIAGGSGSGKTSVTNEIMKNLEGHSVALLAQDYYYKDQSHLTFDERLETNYDHPFAFDNDLLIDNLNDLRNGKQVEVPTYDYSNHTR-SKETIAFEPKDVIIVEGIFALENKTLRDLMDVKIYVDTDADLRILRRLLRDTEERGRTMESVINQYLNVV 164          
BLAST of CV885543 vs. ExPASy Swiss-Prot
Match: URK_MACCJ (Uridine kinase OS=Macrococcus caseolyticus (strain JCSC5402) GN=udk PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.477e-18
Identity = 51/155 (32.90%), Postives = 90/155 (58.06%), Query Frame = 3
Query:  315 LVGVAGPSGAGKTVFTEKVLNFMP--SIAVITMDNYNDSS------RIIDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYAL-SEKLRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQ 752
            ++G+AG SG+GKT  T K+L  +   S+A+I  D Y  +         +  N+D P   D + L++N++ L+ GK V+VP YD+ + +R   +T+      ++I+EGI+AL +  LR L+D+++ V       +++R+ RDI+  G+  E +I Q
Sbjct:    6 IIGIAGGSGSGKTSVTSKILKNLEGYSVALIEQDYYYKNQDHLTFEERLKTNYDHPFAFDNELLIQNLKDLRNGKTVEVPTYDYSNHTR-SEKTITFEPKDVIIVEGIFALENSNLRDLMDVKIYVDTDADLRILRRIVRDIEERGRTMESVIDQ 159          
BLAST of CV885543 vs. ExPASy Swiss-Prot
Match: URK_BORHD (Uridine kinase OS=Borrelia hermsii (strain DAH) GN=udk PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.459e-18
Identity = 51/159 (32.08%), Postives = 87/159 (54.72%), Query Frame = 3
Query:  315 LVGVAGPSGAGKTVFTEKVLNFMPSIAVITMDNYNDSS-----RIIDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYA-LSEKLRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVFA 773
            ++G+AG SG+GKT    K+   +P   +I+ DNY  S        +D NFD P   D +   + ++ +KE K + +P+YDF +  R    T+E+  + +VI+EGI   + E++R LIDL++ +        ++R+ RD+ + G+  E +I Q   T  A
Sbjct:    4 IIGIAGGSGSGKTTIVNKISEVIPEFVLISQDNYYKSVGDYEYEFLDVNFDHPDAFDNNLFYKQLKKIKENKLIHMPLYDFINHRRKD-ETVEIVPTPVVIVEGIMIFVEERVRNLIDLKIYIDTPNDIRFIRRLERDMSKRGRTLESVIEQYLSTTRA 161          
The following BLAST results are available for this feature:
BLAST of CV885543 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 214
Match NameE-valueIdentityDescription
URK_STAAB5.858e-1933.13Uridine kinase OS=Staphylococcus aureus (strain bo... [more]
URK_STAA95.858e-1933.13Uridine kinase OS=Staphylococcus aureus (strain JH... [more]
URK_STAA85.858e-1933.13Uridine kinase OS=Staphylococcus aureus (strain NC... [more]
URK_STAA35.858e-1933.13Uridine kinase OS=Staphylococcus aureus (strain US... [more]
URK_STAA25.858e-1933.13Uridine kinase OS=Staphylococcus aureus (strain JH... [more]
URK_STAA15.858e-1933.13Uridine kinase OS=Staphylococcus aureus (strain Mu... [more]
URK_STAHJ2.226e-1832.50Uridine kinase OS=Staphylococcus haemolyticus (str... [more]
URK_STAS13.797e-1832.50Uridine kinase OS=Staphylococcus saprophyticus sub... [more]
URK_MACCJ6.477e-1832.90Uridine kinase OS=Macrococcus caseolyticus (strain... [more]
URK_BORHD8.459e-1832.08Uridine kinase OS=Borrelia hermsii (strain DAH) GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_016C09_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_016_T7_C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885543 ID=CV885543; Name=CV885543; organism=Citrus sinensis; type=EST; length=921bp
CCCAAAACCCCAGAAGCCTCTGTTCATCTTGATTCCTAAGAATTCACTGT
TCCAAAAAAAGAAAAAAAAAATCAAAGAAAAGCAAGGGAGGGAATATATA
TTGTGGAACTTATATGGCTCAGGACACTTCTTCAGGTGCTGATTCACCTC
GACGACGACCTGGTCTGTTGCGAGATCAGGTTCAGTTGGTTAAGAAGAAG
GACTCTGATCGCTATGAGATTGTTCCTATAGAAGATACATTGTCATTTGA
AAAAGGTTTTTTCATAGTAATTCGTGCATGCCAATTGTTGGCTCAAAAGA
ATCATGGGATAATATTAGTTGGAGTAGCAGGTCCCTCCGGAGCTGGAAAG
ACTGTCTTCACTGAGAAGGTGCTCAACTTTATGCCCAGTATTGCTGTGAT
AACCATGGACAACTACAACGATTCTAGTCGTATCATTGATGGCAACTTCG
ATGACCCGCGCTTGACAGATTATGACACACTGCTTGAAAACATTCGTGGT
TTAAAGGAAGGGAAAGCTGTTCAAGTCCCAATTTACGACTTCAAGTCTAG
TTCTCGCATTGGTTACAGGACACTTGAAGTCCCTAGCTCCCGCATTGTGA
TTATTGAAGGCATCTATGCCTTAAGTGAAAAACTGCGGCCTTTGATAGAT
CTTCGTGTATCTGTTACGGGTGGAGTTCATTTTGATCTCGTAAAGCGAGT
TTTTCGTGACATTCAACGTGTTGGCCAAGAGCCTGAAGAGATAATCCATC
AAATATCTGAAACGGTTTTTGCACTTATCTCATGATAAGATTGTTTTCTG
TTGGCTTTCTTACTGAGTTTCTTCAGTCATTCGGTTGCCAATTGTAATTG
ATAAAGATTTTCTTTTTTTCCTCTTTTCACTTCCATCCTAATATAGCAGT
TTCAAATATTTCTTTTTTGCA
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