CV885543

Overview
NameCV885543
Unique NameCV885543
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length921
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885543 vs. ExPASy Swiss-Prot
Match: URK_LACJO (Uridine kinase OS=Lactobacillus johnsonii GN=udk PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.161e-17
Identity = 55/162 (33.95%), Postives = 92/162 (56.79%), Query Frame = 3
Query:  312 ILVGVAGPSGAGKTVFTEKVLNFMPS---IAVITMDNY---NDSSRIIDG---NFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSEK-LRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETV 767
            I++G+AG SG+GKT    ++ + +     I ++T D+Y   ND+  + D    N+D P   D   L+E +R L + KAV++P+YDF + +R   +T+    + I+I+EGI  L E+ LR L+ ++V V        ++R+ RD Q  G+  E +I+Q   TV
Sbjct:    7 IIIGIAGGSGSGKTTIAHEIYDQLQQDDHILIMTQDSYYKNNDNLSMADRKKINYDHPDAFDMPLLVEQLRQLMDYKAVEMPVYDFTAHTR-SEKTIHTEPADIIILEGILVLGEENLRDLMSIKVFVDTDDDIRFIRRLERDTQERGRSVESVINQYLATV 167          
BLAST of CV885543 vs. ExPASy Swiss-Prot
Match: URK_BORGA (Uridine kinase OS=Borrelia garinii GN=udk PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.221e-16
Identity = 49/156 (31.41%), Postives = 85/156 (54.49%), Query Frame = 3
Query:  315 LVGVAGPSGAGKTVFTEKVLNFMPSIAVITMDNYNDSS-----RIIDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYA-LSEKLRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISET 764
            ++G++G SG+GKT    K+  F+P   +I+ DNY  S           NFD P   D +   E+++ LK+   + +P+YDF +  R   +T+ V  + ++I+EGI   + E++R LIDL++ +        ++R+ RDI + G+  E +I Q   T
Sbjct:    4 IIGISGGSGSGKTTVVSKISEFIPEFVLISQDNYYKSVGDYEYEFSKVNFDHPDAFDNNLFYEHLKNLKKNSPIDMPLYDFINHKR-QLKTVMVVPTPVIIVEGIMIFVEERVRNLIDLKIYIDTPNDIRFIRRLKRDISKRGRTLESVIDQYLNT 158          
BLAST of CV885543 vs. ExPASy Swiss-Prot
Match: URK_BORAP (Uridine kinase OS=Borrelia afzelii (strain PKo) GN=udk PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.221e-16
Identity = 50/156 (32.05%), Postives = 84/156 (53.85%), Query Frame = 3
Query:  315 LVGVAGPSGAGKTVFTEKVLNFMPSIAVITMDNYNDSS-----RIIDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYA-LSEKLRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISET 764
            ++G++G SG+GKT    K+  F+P   +I+ DNY  S           NFD P   D +   E+++ LK+   + +P+YDF +  R     L VP+  ++I+EGI   + E++R LIDL++ +        ++R+ RDI + G+  E +I Q   T
Sbjct:    4 IIGISGGSGSGKTTVVSKISEFIPEFVLISQDNYYKSVGDYEYEFSKVNFDHPDAFDNNLFYEHLKNLKKNSPIDMPLYDFINHKRQLKTVLVVPTP-VIIVEGIMIFVEERVRNLIDLKIYIDTPNDIRFIRRLRRDISKRGRTLESVIDQYLNT 158          
BLAST of CV885543 vs. ExPASy Swiss-Prot
Match: URK_BACHD (Uridine kinase OS=Bacillus halodurans GN=udk PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.083e-16
Identity = 49/161 (30.43%), Postives = 91/161 (56.52%), Query Frame = 3
Query:  312 ILVGVAGPSGAGKTVFTEKVLNFMPSIAVITMDN---YNDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYAL-SEKLRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETV 767
            I++GVAG +G+GKT   +++       +++ ++    Y D S++     +  N+D P   D D L+E++  L  G+A++ P+YD+K  +R     L  P   ++I+EGI  L  E+LR L+D+++ V       +++R+ RDI+  G+  E +I Q ++ V
Sbjct:    6 IIIGVAGGTGSGKTTVAKEIFYQFNEKSIVLIEQDAYYKDQSQLSLEERLQTNYDHPLAFDNDLLIEHLHSLLNGQAIEKPVYDYKLHTRSNEVILVEPKD-VIILEGILLLEDERLRELMDIKLFVDTDADIRIIRRMVRDIRERGRTLESVIEQYTKVV 165          
BLAST of CV885543 vs. ExPASy Swiss-Prot
Match: URK_STRU0 (Uridine kinase OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J) GN=udk PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.721e-16
Identity = 51/161 (31.68%), Postives = 91/161 (56.52%), Query Frame = 3
Query:  312 ILVGVAGPSGAGKTVFTEKVLNFMPS--IAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYAL-SEKLRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETV 767
            I++GV G SG GKT  +  +L+  P+  IA+I  D+Y  D + +     +  N+D P   D D ++E ++ L +G+ V +P+YD+K+ +R   +T       ++I+EGI  L  E+LR L+D+++ V       +++R+ RD+   G+  + II Q +  V
Sbjct:    6 IIIGVTGGSGGGKTSVSRAILDSFPNARIAMIQHDSYYKDQAHLSFEERVKTNYDHPLAFDTDFMIEQLKELLKGRPVDIPVYDYKAHTR-SDKTFRQEPQDVIIVEGILVLEDERLRDLMDIKLFVDTDDDIRIIRRIKRDMMERGRSLDSIIEQYTTVV 165          
BLAST of CV885543 vs. ExPASy Swiss-Prot
Match: URK_LACRJ (Uridine kinase OS=Lactobacillus reuteri (strain JCM 1112) GN=udk PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.721e-16
Identity = 54/167 (32.34%), Postives = 94/167 (56.29%), Query Frame = 3
Query:  294 QKNHGIILVGVAGPSGAGKTVFTEKVLNFM--PSIAVITMDNY-NDSSRIIDG-----NFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYAL-SEKLRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETV 767
            Q+N   +++GV G SG+GKT  + K+ + +   +I +I  D Y ND S +        N+D P   D D L++ +  L+  KA+++P+YD+   +R   +T+ V  + ++I+EGI  L  E+LR L+D++V V       +++R+ RD+   G+  + II Q   TV
Sbjct:    4 QQNKRPVVIGVTGGSGSGKTTVSNKIYDQLHGQAIQIINQDTYYNDQSDMTMDERKAVNYDHPLAFDTDFLIKQLTDLRSNKAIEMPVYDYTQYTR-SDKTVHVEPTDVIILEGILILDDERLRDLMDIKVYVDTDDDIRIIRRIQRDMVERGRSLDSIITQYLATV 169          
BLAST of CV885543 vs. ExPASy Swiss-Prot
Match: URK_LACRD (Uridine kinase OS=Lactobacillus reuteri (strain DSM 20016) GN=udk PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.721e-16
Identity = 54/167 (32.34%), Postives = 94/167 (56.29%), Query Frame = 3
Query:  294 QKNHGIILVGVAGPSGAGKTVFTEKVLNFM--PSIAVITMDNY-NDSSRIIDG-----NFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYAL-SEKLRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETV 767
            Q+N   +++GV G SG+GKT  + K+ + +   +I +I  D Y ND S +        N+D P   D D L++ +  L+  KA+++P+YD+   +R   +T+ V  + ++I+EGI  L  E+LR L+D++V V       +++R+ RD+   G+  + II Q   TV
Sbjct:    4 QQNKRPVVIGVTGGSGSGKTTVSNKIYDQLHGQAIQIINQDTYYNDQSDMTMDERKAVNYDHPLAFDTDFLIKQLTDLRSNKAIEMPVYDYTQYTR-SDKTVHVEPTDVIILEGILILDDERLRDLMDIKVYVDTDDDIRIIRRIQRDMVERGRSLDSIITQYLATV 169          
BLAST of CV885543 vs. ExPASy Swiss-Prot
Match: URK_BORRA (Uridine kinase OS=Borrelia recurrentis (strain A1) GN=udk PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.721e-16
Identity = 48/159 (30.19%), Postives = 87/159 (54.72%), Query Frame = 3
Query:  315 LVGVAGPSGAGKTVFTEKVLNFMPSIAVITMDNYNDSS-----RIIDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYA-LSEKLRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVFA 773
            ++G++G SG+GKT    K+   +    +I+ DNY  S        +D NFD P   D +   + ++ LKE +++ +P+YDF +  R    T+++  + I+I+EGI   + E++R LIDL++ +        ++R+ RD+ + G+  E +I Q   T  A
Sbjct:    4 IIGISGGSGSGKTTIVNKISEVISEFVLISQDNYYKSVGDYEYEFLDVNFDHPDAFDNNLFYKQLKKLKENQSINMPLYDFINHKRRD-ETIKIVPTPIIIVEGIMIFVEERVRNLIDLKIYIDTPNDIRFIRRLERDMSKRGRTLESVIEQYLRTTRA 161          
BLAST of CV885543 vs. ExPASy Swiss-Prot
Match: URK_BORDL (Uridine kinase OS=Borrelia duttonii (strain Ly) GN=udk PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.721e-16
Identity = 48/159 (30.19%), Postives = 87/159 (54.72%), Query Frame = 3
Query:  315 LVGVAGPSGAGKTVFTEKVLNFMPSIAVITMDNYNDSS-----RIIDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYA-LSEKLRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVFA 773
            ++G++G SG+GKT    K+   +    +I+ DNY  S        +D NFD P   D +   + ++ LKE +++ +P+YDF +  R    T+++  + I+I+EGI   + E++R LIDL++ +        ++R+ RD+ + G+  E +I Q   T  A
Sbjct:    4 IIGISGGSGSGKTTIVNKISEVISEFVLISQDNYYKSVGDYEYEFLDVNFDHPDAFDNNLFYKQLKKLKENQSINMPLYDFINHKRRD-ETIKIVPTPIIIVEGIMIFVEERVRNLIDLKIYIDTPNDIRFIRRLERDMSKRGRTLESVIEQYLRTTRA 161          
BLAST of CV885543 vs. ExPASy Swiss-Prot
Match: URK_STRPZ (Uridine kinase OS=Streptococcus pyogenes serotype M49 (strain NZ131) GN=udk PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.554e-16
Identity = 53/161 (32.92%), Postives = 89/161 (55.28%), Query Frame = 3
Query:  312 ILVGVAGPSGAGKTVFTEKVLNFMPS--IAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYAL-SEKLRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETV 767
            I++GV G SG GKT  +  +L+  P+  IA+I  D+Y  D S +     +  N+D P   D D +++ ++ L  G+ V +PIYD+K  +R      + P   ++I+EGI  L  E+LR L+D+++ V       +++R+ RD+   G+  E II Q +  V
Sbjct:    6 IIIGVTGGSGGGKTSVSRAILDSFPNARIAMIQHDSYYKDQSHMSFEERVKTNYDHPLAFDTDFMIQQLKELLAGRPVDIPIYDYKKHTRSNTTFRQDPQD-VIIVEGILVLEDERLRDLMDIKLFVDTDDDIRIIRRIKRDMMERGRSLESIIDQYTSVV 165          
The following BLAST results are available for this feature:
BLAST of CV885543 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 214
Match NameE-valueIdentityDescription
URK_LACJO7.161e-1733.95Uridine kinase OS=Lactobacillus johnsonii GN=udk P... [more]
URK_BORGA1.221e-1631.41Uridine kinase OS=Borrelia garinii GN=udk PE=3 SV=... [more]
URK_BORAP1.221e-1632.05Uridine kinase OS=Borrelia afzelii (strain PKo) GN... [more]
URK_BACHD2.083e-1630.43Uridine kinase OS=Bacillus halodurans GN=udk PE=3 ... [more]
URK_STRU02.721e-1631.68Uridine kinase OS=Streptococcus uberis (strain ATC... [more]
URK_LACRJ2.721e-1632.34Uridine kinase OS=Lactobacillus reuteri (strain JC... [more]
URK_LACRD2.721e-1632.34Uridine kinase OS=Lactobacillus reuteri (strain DS... [more]
URK_BORRA2.721e-1630.19Uridine kinase OS=Borrelia recurrentis (strain A1)... [more]
URK_BORDL2.721e-1630.19Uridine kinase OS=Borrelia duttonii (strain Ly) GN... [more]
URK_STRPZ3.554e-1632.92Uridine kinase OS=Streptococcus pyogenes serotype ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_016C09_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_016_T7_C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885543 ID=CV885543; Name=CV885543; organism=Citrus sinensis; type=EST; length=921bp
CCCAAAACCCCAGAAGCCTCTGTTCATCTTGATTCCTAAGAATTCACTGT
TCCAAAAAAAGAAAAAAAAAATCAAAGAAAAGCAAGGGAGGGAATATATA
TTGTGGAACTTATATGGCTCAGGACACTTCTTCAGGTGCTGATTCACCTC
GACGACGACCTGGTCTGTTGCGAGATCAGGTTCAGTTGGTTAAGAAGAAG
GACTCTGATCGCTATGAGATTGTTCCTATAGAAGATACATTGTCATTTGA
AAAAGGTTTTTTCATAGTAATTCGTGCATGCCAATTGTTGGCTCAAAAGA
ATCATGGGATAATATTAGTTGGAGTAGCAGGTCCCTCCGGAGCTGGAAAG
ACTGTCTTCACTGAGAAGGTGCTCAACTTTATGCCCAGTATTGCTGTGAT
AACCATGGACAACTACAACGATTCTAGTCGTATCATTGATGGCAACTTCG
ATGACCCGCGCTTGACAGATTATGACACACTGCTTGAAAACATTCGTGGT
TTAAAGGAAGGGAAAGCTGTTCAAGTCCCAATTTACGACTTCAAGTCTAG
TTCTCGCATTGGTTACAGGACACTTGAAGTCCCTAGCTCCCGCATTGTGA
TTATTGAAGGCATCTATGCCTTAAGTGAAAAACTGCGGCCTTTGATAGAT
CTTCGTGTATCTGTTACGGGTGGAGTTCATTTTGATCTCGTAAAGCGAGT
TTTTCGTGACATTCAACGTGTTGGCCAAGAGCCTGAAGAGATAATCCATC
AAATATCTGAAACGGTTTTTGCACTTATCTCATGATAAGATTGTTTTCTG
TTGGCTTTCTTACTGAGTTTCTTCAGTCATTCGGTTGCCAATTGTAATTG
ATAAAGATTTTCTTTTTTTCCTCTTTTCACTTCCATCCTAATATAGCAGT
TTCAAATATTTCTTTTTTGCA
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