CV885543

Overview
NameCV885543
Unique NameCV885543
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length921
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885543 vs. ExPASy Swiss-Prot
Match: URK_STRPG (Uridine kinase OS=Streptococcus pyogenes serotype M5 (strain Manfredo) GN=udk PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.554e-16
Identity = 53/161 (32.92%), Postives = 89/161 (55.28%), Query Frame = 3
Query:  312 ILVGVAGPSGAGKTVFTEKVLNFMPS--IAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYAL-SEKLRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETV 767
            I++GV G SG GKT  +  +L+  P+  IA+I  D+Y  D S +     +  N+D P   D D +++ ++ L  G+ V +PIYD+K  +R      + P   ++I+EGI  L  E+LR L+D+++ V       +++R+ RD+   G+  E II Q +  V
Sbjct:    6 IIIGVTGGSGGGKTSVSRAILDSFPNARIAMIQHDSYYKDQSHMSFEERVKTNYDHPLAFDTDFMIQQLKELLAGRPVDIPIYDYKKHTRSNTTFRQDPQD-VIIVEGILVLEDERLRDLMDIKLFVDTDDDIRIIRRIKRDMMERGRSLESIIDQYTSVV 165          
BLAST of CV885543 vs. ExPASy Swiss-Prot
Match: URK_STRP8 (Uridine kinase OS=Streptococcus pyogenes serotype M18 GN=udk PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.554e-16
Identity = 53/161 (32.92%), Postives = 89/161 (55.28%), Query Frame = 3
Query:  312 ILVGVAGPSGAGKTVFTEKVLNFMPS--IAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYAL-SEKLRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETV 767
            I++GV G SG GKT  +  +L+  P+  IA+I  D+Y  D S +     +  N+D P   D D +++ ++ L  G+ V +PIYD+K  +R      + P   ++I+EGI  L  E+LR L+D+++ V       +++R+ RD+   G+  E II Q +  V
Sbjct:    6 IIIGVTGGSGGGKTSVSRAILDSFPNARIAMIQHDSYYKDQSHMSFEERVKTNYDHPLAFDTDFMIQQLKELLAGRPVDIPIYDYKKHTRSNTTFRQDPQD-VIIVEGILVLEDERLRDLMDIKLFVDTDDDIRIIRRIKRDMMERGRSLESIIDQYTSVV 165          
BLAST of CV885543 vs. ExPASy Swiss-Prot
Match: URK_STRP6 (Uridine kinase OS=Streptococcus pyogenes serotype M6 GN=udk PE=1 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 3.554e-16
Identity = 53/161 (32.92%), Postives = 89/161 (55.28%), Query Frame = 3
Query:  312 ILVGVAGPSGAGKTVFTEKVLNFMPS--IAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYAL-SEKLRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETV 767
            I++GV G SG GKT  +  +L+  P+  IA+I  D+Y  D S +     +  N+D P   D D +++ ++ L  G+ V +PIYD+K  +R      + P   ++I+EGI  L  E+LR L+D+++ V       +++R+ RD+   G+  E II Q +  V
Sbjct:    6 IIIGVTGGSGGGKTSVSRAILDSFPNARIAMIQHDSYYKDQSHMSFEERVKTNYDHPLAFDTDFMIQQLKELLAGRPVDIPIYDYKKHTRSNTTFRQDPQD-VIIVEGILVLEDERLRDLMDIKLFVDTDDDIRIIRRIKRDMMERGRSLESIIDQYTSVV 165          
BLAST of CV885543 vs. ExPASy Swiss-Prot
Match: URK_STRP3 (Uridine kinase OS=Streptococcus pyogenes serotype M3 GN=udk PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.554e-16
Identity = 53/161 (32.92%), Postives = 89/161 (55.28%), Query Frame = 3
Query:  312 ILVGVAGPSGAGKTVFTEKVLNFMPS--IAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYAL-SEKLRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETV 767
            I++GV G SG GKT  +  +L+  P+  IA+I  D+Y  D S +     +  N+D P   D D +++ ++ L  G+ V +PIYD+K  +R      + P   ++I+EGI  L  E+LR L+D+++ V       +++R+ RD+   G+  E II Q +  V
Sbjct:    6 IIIGVTGGSGGGKTSVSRAILDSFPNARIAMIQHDSYYKDQSHMSFEERVKTNYDHPLAFDTDFMIQQLKELLAGRPVDIPIYDYKKHTRSNTTFRQDPQD-VIIVEGILVLEDERLRDLMDIKLFVDTDDDIRIIRRIKRDMMERGRSLESIIDQYTSVV 165          
BLAST of CV885543 vs. ExPASy Swiss-Prot
Match: URK_STRP1 (Uridine kinase OS=Streptococcus pyogenes serotype M1 GN=udk PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.554e-16
Identity = 53/161 (32.92%), Postives = 89/161 (55.28%), Query Frame = 3
Query:  312 ILVGVAGPSGAGKTVFTEKVLNFMPS--IAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYAL-SEKLRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETV 767
            I++GV G SG GKT  +  +L+  P+  IA+I  D+Y  D S +     +  N+D P   D D +++ ++ L  G+ V +PIYD+K  +R      + P   ++I+EGI  L  E+LR L+D+++ V       +++R+ RD+   G+  E II Q +  V
Sbjct:    6 IIIGVTGGSGGGKTSVSRAILDSFPNARIAMIQHDSYYKDQSHMSFEERVKTNYDHPLAFDTDFMIQQLKELLAGRPVDIPIYDYKKHTRSNTTFRQDPQD-VIIVEGILVLEDERLRDLMDIKLFVDTDDDIRIIRRIKRDMMERGRSLESIIDQYTSVV 165          
BLAST of CV885543 vs. ExPASy Swiss-Prot
Match: URK_VIBPA (Uridine kinase OS=Vibrio parahaemolyticus GN=udk PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.641e-16
Identity = 54/169 (31.95%), Postives = 92/169 (54.44%), Query Frame = 3
Query:  300 NHGIILVGVAGPSGAGKTVFTEKVLNFMPS------IAVITMD-NYNDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSE-KLRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETV 767
            N+  ++VG+AG S +GK++    + N + +      I VIT D  YND S +     +  N+D P   D+D L E++  L  G+AV+VP Y +   +R    T   P  +++I+EGI  L++ +LR L+   V +   +   L++RV RD++  G+  E ++ Q  +TV
Sbjct:    4 NNQCVIVGIAGASASGKSLIASTIYNELRAKVGDHQIGVITEDCYYNDQSHLSMEERVKTNYDHPSALDHDLLCEHLEKLVRGEAVEVPEYSYTEHTRTSNTTTMTP-KKVIILEGILLLTDPRLRDLMHATVFMDTPLDICLLRRVKRDVEERGRTMESVLKQYQQTV 171          
BLAST of CV885543 vs. ExPASy Swiss-Prot
Match: URK_DEIDV (Uridine kinase OS=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) GN=udk PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.062e-16
Identity = 53/160 (33.12%), Postives = 86/160 (53.75%), Query Frame = 3
Query:  315 LVGVAGPSGAGKTVFTEKVLNFMPS--IAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYAL-SEKLRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETV 767
            ++GVAG SG+GKT  T +V+  +    ++V+  DNY  D S I     ++ N+D P   D+  L  ++  L  G  + +P YDF   +R    +  +P + +V++EG +AL  E+LR  + L+V V        ++R+ RD Q  G+ PE +I Q  E V
Sbjct:    9 VIGVAGGSGSGKTTVTRRVIETVGGNGVSVLNQDNYYRDQSDIPFNARLNTNYDHPAAFDWPLLRSHLDALLSGVPIDMPEYDFTQHTRSAQASTVLPGA-VVVLEGFFALYDEELRERMHLKVFVDADADVRFIRRLLRDTQERGRTPESVIQQYLEYV 167          
BLAST of CV885543 vs. ExPASy Swiss-Prot
Match: URK_VIBHB (Uridine kinase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=udk PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.917e-16
Identity = 54/169 (31.95%), Postives = 92/169 (54.44%), Query Frame = 3
Query:  300 NHGIILVGVAGPSGAGKTVFTEKVLNFMPS------IAVITMD-NYNDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSE-KLRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETV 767
            N+  ++VG+AG S +GK++    + N +        I VIT D  YND S++     +  N+D P   D+D L E++  L  G+AV+VP Y +   +R    T   P  +++I+EGI  L++ +LR L+   V +   +   L++RV RD++  G+  E ++ Q  +TV
Sbjct:    4 NNQCVIVGIAGASASGKSLIASTIYNELREKVGDHQIGVITEDCYYNDQSQLSMEERVKTNYDHPSALDHDLLCEHLEKLVRGEAVEVPEYSYTEHTRTSNTTPMTP-KKVIILEGILLLTDPRLRDLMHATVFMDTPLDICLLRRVKRDVEERGRTMESVLKQYQQTV 171          
BLAST of CV885543 vs. ExPASy Swiss-Prot
Match: URK_VIBCH (Uridine kinase OS=Vibrio cholerae GN=udk PE=3 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 7.917e-16
Identity = 54/170 (31.76%), Postives = 93/170 (54.71%), Query Frame = 3
Query:  297 KNHGIILVGVAGPSGAGKTVFTEKVLNFMPS------IAVITMD-NYNDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSE-KLRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETV 767
            +N+  ++VG+AG S +GK++    + N + +      I VIT D  Y D S +     +  N+D P   D+D L ++++ L  G+AV+VP Y +   +R    T   P  +++I+EGI  L++ +LR L+   V +   +   L++RV RD+Q  G+  E ++ Q  ETV
Sbjct:    3 ENNQCVIVGIAGASASGKSLIASTIYNELRAKVGDHQIGVITEDCYYKDQSHLSMEERVKTNYDHPSALDHDLLCQHLQMLARGEAVEVPEYSYTEHTRTEQTTTMTP-KKVIILEGILLLTDPRLRDLMHATVFMDTPLDICLLRRVKRDVQERGRTMESVLKQYQETV 171          
BLAST of CV885543 vs. ExPASy Swiss-Prot
Match: URK_TOLAT (Uridine kinase OS=Tolumonas auensis (strain DSM 9187 / TA4) GN=udk PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.034e-15
Identity = 52/173 (30.06%), Postives = 93/173 (53.76%), Query Frame = 3
Query:  288 LAQKNHGIILVGVAGPSGAGKTVFTEKVLNFMPS------IAVITMD-NYNDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSEK-LRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETV 767
            ++  N   +++G+AG S +GK++    + N + +      I VIT D  Y D S +     I  N+D P   D+  L E+++ L  GKAV +P Y +   +R   +T+     RI+I+EGI  L++  LR L+++ + +   +   LV+R+ RD+Q  G+  + ++ Q  +TV
Sbjct:    1 MSDTNPDCVIIGIAGASASGKSLIARTIYNELTAELGEDQIGVITEDCYYKDQSHLPMAERIKTNYDHPAAFDHALLAEHLKQLMAGKAVDIPTYSYSEHTRTD-QTIRFTPKRIIILEGILLLNDSALRKLLNVSIFMDTPLDICLVRRLARDVQERGRTMDSVLEQYQKTV 172          
The following BLAST results are available for this feature:
BLAST of CV885543 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 214
Match NameE-valueIdentityDescription
URK_STRPG3.554e-1632.92Uridine kinase OS=Streptococcus pyogenes serotype ... [more]
URK_STRP83.554e-1632.92Uridine kinase OS=Streptococcus pyogenes serotype ... [more]
URK_STRP63.554e-1632.92Uridine kinase OS=Streptococcus pyogenes serotype ... [more]
URK_STRP33.554e-1632.92Uridine kinase OS=Streptococcus pyogenes serotype ... [more]
URK_STRP13.554e-1632.92Uridine kinase OS=Streptococcus pyogenes serotype ... [more]
URK_VIBPA4.641e-1631.95Uridine kinase OS=Vibrio parahaemolyticus GN=udk P... [more]
URK_DEIDV6.062e-1633.13Uridine kinase OS=Deinococcus deserti (strain VCD1... [more]
URK_VIBHB7.917e-1631.95Uridine kinase OS=Vibrio harveyi (strain ATCC BAA-... [more]
URK_VIBCH7.917e-1631.76Uridine kinase OS=Vibrio cholerae GN=udk PE=3 SV=2[more]
URK_TOLAT1.034e-1530.06Uridine kinase OS=Tolumonas auensis (strain DSM 91... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_016C09_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_016_T7_C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885543 ID=CV885543; Name=CV885543; organism=Citrus sinensis; type=EST; length=921bp
CCCAAAACCCCAGAAGCCTCTGTTCATCTTGATTCCTAAGAATTCACTGT
TCCAAAAAAAGAAAAAAAAAATCAAAGAAAAGCAAGGGAGGGAATATATA
TTGTGGAACTTATATGGCTCAGGACACTTCTTCAGGTGCTGATTCACCTC
GACGACGACCTGGTCTGTTGCGAGATCAGGTTCAGTTGGTTAAGAAGAAG
GACTCTGATCGCTATGAGATTGTTCCTATAGAAGATACATTGTCATTTGA
AAAAGGTTTTTTCATAGTAATTCGTGCATGCCAATTGTTGGCTCAAAAGA
ATCATGGGATAATATTAGTTGGAGTAGCAGGTCCCTCCGGAGCTGGAAAG
ACTGTCTTCACTGAGAAGGTGCTCAACTTTATGCCCAGTATTGCTGTGAT
AACCATGGACAACTACAACGATTCTAGTCGTATCATTGATGGCAACTTCG
ATGACCCGCGCTTGACAGATTATGACACACTGCTTGAAAACATTCGTGGT
TTAAAGGAAGGGAAAGCTGTTCAAGTCCCAATTTACGACTTCAAGTCTAG
TTCTCGCATTGGTTACAGGACACTTGAAGTCCCTAGCTCCCGCATTGTGA
TTATTGAAGGCATCTATGCCTTAAGTGAAAAACTGCGGCCTTTGATAGAT
CTTCGTGTATCTGTTACGGGTGGAGTTCATTTTGATCTCGTAAAGCGAGT
TTTTCGTGACATTCAACGTGTTGGCCAAGAGCCTGAAGAGATAATCCATC
AAATATCTGAAACGGTTTTTGCACTTATCTCATGATAAGATTGTTTTCTG
TTGGCTTTCTTACTGAGTTTCTTCAGTCATTCGGTTGCCAATTGTAATTG
ATAAAGATTTTCTTTTTTTCCTCTTTTCACTTCCATCCTAATATAGCAGT
TTCAAATATTTCTTTTTTGCA
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