CV885543

Overview
NameCV885543
Unique NameCV885543
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length921
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885543 vs. ExPASy Swiss-Prot
Match: URK_VIBVY (Uridine kinase OS=Vibrio vulnificus (strain YJ016) GN=udk PE=3 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 3.009e-15
Identity = 52/165 (31.52%), Postives = 91/165 (55.15%), Query Frame = 3
Query:  312 ILVGVAGPSGAGKTVFTEKVLNFMPS------IAVITMD-NYNDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSE-KLRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETV 767
            ++VG+AG S +GK++    + N + +      I VIT D  YND S +     +  N+D P   D+D L E++  L +G++V+VP Y +   +R    T   P  +++I+EGI  L++ +LR L+   V +   +   L++RV RD++  G+  E ++ Q  +TV
Sbjct:    8 VIVGIAGASASGKSLIASTIYNELRAKVGDHQIGVITEDCYYNDQSHLSMEERVKTNYDHPNALDHDLLCEHLEKLMKGESVEVPEYSYTEHTRTENTTTMTP-KKVIILEGILLLTDPRLRDLMHATVFMDTPLDICLLRRVKRDVEERGRTMESVLKQYQKTV 171          
BLAST of CV885543 vs. ExPASy Swiss-Prot
Match: URK_VIBVU (Uridine kinase OS=Vibrio vulnificus GN=udk PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.009e-15
Identity = 52/165 (31.52%), Postives = 91/165 (55.15%), Query Frame = 3
Query:  312 ILVGVAGPSGAGKTVFTEKVLNFMPS------IAVITMD-NYNDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSE-KLRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETV 767
            ++VG+AG S +GK++    + N + +      I VIT D  YND S +     +  N+D P   D+D L E++  L +G++V+VP Y +   +R    T   P  +++I+EGI  L++ +LR L+   V +   +   L++RV RD++  G+  E ++ Q  +TV
Sbjct:    8 VIVGIAGASASGKSLIASTIYNELRAKVGDHQIGVITEDCYYNDQSHLSMEERVKTNYDHPNALDHDLLCEHLEKLMKGESVEVPEYSYTEHTRTENTTTMTP-KKVIILEGILLLTDPRLRDLMHATVFMDTPLDICLLRRVKRDVEERGRTMESVLKQYQKTV 171          
BLAST of CV885543 vs. ExPASy Swiss-Prot
Match: URK_UREU1 (Uridine kinase OS=Ureaplasma urealyticum serovar 10 (strain ATCC 33699 / Western) GN=udk PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.009e-15
Identity = 48/162 (29.63%), Postives = 91/162 (56.17%), Query Frame = 3
Query:  312 ILVGVAGPSGAGKTVFTEKVLNFMP---SIAVITMDNYNDSSRIIDGN------FDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYAL-SEKLRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETV 767
            ILV +AG SG+GKT F  +++  +P   +  +I  D+Y  S+  ++ N      +D P   ++D + E +  +K+ K ++VPIYD+K+  R+  +T+++    +++ EGIYA+  + +  + DL+V +       L++R+ RD+    +  E +I Q   TV
Sbjct:    7 ILVLIAGASGSGKTTFANEIVARIPQNTTSVIICQDSYYISNSQLNKNERRLINYDHPSSFEWDLMREQLSDIKKRKKIKVPIYDYKTEIRLD-KTIDISDVDVIVFEGIYAIYDDVINQIADLKVFIETPKDECLIRRILRDVNERNRSFESVITQWRSTV 167          
BLAST of CV885543 vs. ExPASy Swiss-Prot
Match: UCKL1_HUMAN (Uridine-cytidine kinase-like 1 OS=Homo sapiens GN=UCKL1 PE=1 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 3.009e-15
Identity = 51/162 (31.48%), Postives = 93/162 (57.41%), Query Frame = 3
Query:  318 VGVAGPSGAGKTVFTEKVLNFM--PSIAVITMDNY--------NDSSRIIDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSR-IGYRTLEVPSSRIVIIEGIYALSEK-LRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETV 767
            +G+ G S +GKT     ++  +  P + +++MD++         + +   + NFD P   D+D ++  ++ LK+GK+V+VPIYDF + SR   ++TL    + ++I EGI A ++K L  L+D+++ V       LV+R+ RDI   G++ E +I Q ++ V
Sbjct:  101 IGLGGGSASGKTTVARMIIEALDVPWVVLLSMDSFYKVLTEQQQEQAAHNNFNFDHPDAFDFDLIISTLKKLKQGKSVKVPIYDFTTHSRKKDWKTLY--GANVIIFEGIMAFADKTLLELLDMKIFVDTDSDIRLVRRLRRDISERGRDIEGVIKQYNKFV 260          
BLAST of CV885543 vs. ExPASy Swiss-Prot
Match: URK_STRA5 (Uridine kinase OS=Streptococcus agalactiae serotype V GN=udk PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.929e-15
Identity = 50/161 (31.06%), Postives = 88/161 (54.66%), Query Frame = 3
Query:  312 ILVGVAGPSGAGKTVFTEKVLNFMPS--IAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYAL-SEKLRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETV 767
            I++GV G SG GKT  +  +L+  P   I +I  D+Y  D S +     +  N+D P   D + ++E +  L EG+ V +P+YD+   +R   RT+      ++I+EGI  L  ++LR L+D+++ V       +++R+ RD++   +  + II Q +E V
Sbjct:    6 IIIGVTGGSGGGKTSVSRAILSNFPDQKITMIEHDSYYKDQSHLTFEERVKTNYDHPLAFDTNLMIEQLNELIEGRPVDIPVYDYTKHTR-SDRTIRQEPQDVIIVEGILVLEDQRLRDLMDIKLFVDTDDDIRIIRRIKRDMEERDRSLDSIIEQYTEVV 165          
BLAST of CV885543 vs. ExPASy Swiss-Prot
Match: URK_STRA3 (Uridine kinase OS=Streptococcus agalactiae serotype III GN=udk PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.929e-15
Identity = 50/161 (31.06%), Postives = 88/161 (54.66%), Query Frame = 3
Query:  312 ILVGVAGPSGAGKTVFTEKVLNFMPS--IAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYAL-SEKLRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETV 767
            I++GV G SG GKT  +  +L+  P   I +I  D+Y  D S +     +  N+D P   D + ++E +  L EG+ V +P+YD+   +R   RT+      ++I+EGI  L  ++LR L+D+++ V       +++R+ RD++   +  + II Q +E V
Sbjct:    6 IIIGVTGGSGGGKTSVSRAILSNFPDQKITMIEHDSYYKDQSHLTFEERVKTNYDHPLAFDTNLMIEQLNELIEGRPVDIPVYDYTKHTR-SDRTIRQDPQDVIIVEGILVLEDQRLRDLMDIKLFVDTDDDIRIIRRIKRDMEERDRSLDSIIEQYTEVV 165          
BLAST of CV885543 vs. ExPASy Swiss-Prot
Match: URK_STRA1 (Uridine kinase OS=Streptococcus agalactiae serotype Ia GN=udk PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.929e-15
Identity = 50/161 (31.06%), Postives = 88/161 (54.66%), Query Frame = 3
Query:  312 ILVGVAGPSGAGKTVFTEKVLNFMPS--IAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYAL-SEKLRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETV 767
            I++GV G SG GKT  +  +L+  P   I +I  D+Y  D S +     +  N+D P   D + ++E +  L EG+ V +P+YD+   +R   RT+      ++I+EGI  L  ++LR L+D+++ V       +++R+ RD++   +  + II Q +E V
Sbjct:    6 IIIGVTGGSGGGKTSVSRAILSNFPDQKITMIEHDSYYKDQSHLTFEERVKTNYDHPLAFDTNLMIEQLNELIEGRPVDIPVYDYTKHTR-SDRTIRQEPQDVIIVEGILVLEDQRLRDLMDIKLFVDTDDDIRIIRRIKRDMEERDRSLDSIIEQYTEVV 165          
BLAST of CV885543 vs. ExPASy Swiss-Prot
Match: URK1_YEAST (Uridine kinase OS=Saccharomyces cerevisiae GN=URK1 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.929e-15
Identity = 49/157 (31.21%), Postives = 86/157 (54.78%), Query Frame = 3
Query:  315 LVGVAGPSGAGKTVFTEKVLNFM--PSIAVITMDNY------NDSSRIIDG--NFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYAL-SEKLRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQ 752
            ++G+ G SG+GKT    K+++ +  P   +I++DN+       D +R      +FD+P   + D   + I  LKEGK   +P+Y F   +R+  + + +  + +V+IEGIYAL   +L  L+DL++ V   +   L +R+ RDI   G++ +  I Q
Sbjct:   58 IIGIGGASGSGKTSVAAKIVSSINVPWTVLISLDNFYNPLGPEDRARAFKNEYDFDEPNAINLDLAYKCILNLKEGKRTNIPVYSFVHHNRVPDKNIVIYGASVVVIEGIYALYDRRLLDLMDLKIYVDADLDVCLARRLSRDIVSRGRDLDGCIQQ 214          
BLAST of CV885543 vs. ExPASy Swiss-Prot
Match: URK1_SCHPO (Uridine kinase OS=Schizosaccharomyces pombe GN=urk1 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.929e-15
Identity = 53/162 (32.72%), Postives = 90/162 (55.56%), Query Frame = 3
Query:  318 VGVAGPSGAGKTVFTE---KVLNFMPSIAVITMDNYNDSSRII--------DGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYAL-SEKLRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETV 767
            +G+AGPSG+GKT   +   K LN +P + ++++D++  S            D +FD P   D+D L   +  LK+G+ V +PIY F   +R+   T  +  + I+I+EGI+AL  EK+R L+D+ V +       L +R+ RDI   G++   ++ Q ++ V
Sbjct:   24 IGIAGPSGSGKTSVAQLIVKALN-LPHVVILSLDSFYKSLNAEQKKRAFNNDYDFDSPEAIDWDLLFVKLLELKQGRKVDIPIYSFNEHNRLP-ETNTLFGASIIILEGIFALYDEKIRSLLDVSVFLDTDSDVCLSRRLNRDINYRGRDIVGVLEQYNKFV 183          
BLAST of CV885543 vs. ExPASy Swiss-Prot
Match: URK_UREPA (Uridine kinase OS=Ureaplasma parvum GN=udk PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 5.132e-15
Identity = 46/162 (28.40%), Postives = 92/162 (56.79%), Query Frame = 3
Query:  312 ILVGVAGPSGAGKTVFTEKVLNFMP---SIAVITMDNYNDSSRIIDG------NFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYAL-SEKLRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETV 767
            IL+ +AG SG+GKT F  +++  +P   +  VI  D+Y  S+  ++       N+D P   +++ + E +  +K+ K ++VPIYD+K+  R+  +T+++    ++++EGIYA+  + +  + DL++ +       L++R+ RD+    +  E +I Q   TV
Sbjct:    7 ILILIAGASGSGKTTFANEIIARIPKNTTSVVICQDSYYISNSQLNKKERRLINYDHPSSFEWELMREQLSDIKKRKKIKVPIYDYKTEIRLD-KTIDISDVDVIVLEGIYAIYDDVINQIADLKIFIETPKDECLIRRILRDVNERNRSFESVITQWRSTV 167          
The following BLAST results are available for this feature:
BLAST of CV885543 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 214
Match NameE-valueIdentityDescription
URK_VIBVY3.009e-1531.52Uridine kinase OS=Vibrio vulnificus (strain YJ016)... [more]
URK_VIBVU3.009e-1531.52Uridine kinase OS=Vibrio vulnificus GN=udk PE=3 SV... [more]
URK_UREU13.009e-1529.63Uridine kinase OS=Ureaplasma urealyticum serovar 1... [more]
UCKL1_HUMAN3.009e-1531.48Uridine-cytidine kinase-like 1 OS=Homo sapiens GN=... [more]
URK_STRA53.929e-1531.06Uridine kinase OS=Streptococcus agalactiae serotyp... [more]
URK_STRA33.929e-1531.06Uridine kinase OS=Streptococcus agalactiae serotyp... [more]
URK_STRA13.929e-1531.06Uridine kinase OS=Streptococcus agalactiae serotyp... [more]
URK1_YEAST3.929e-1531.21Uridine kinase OS=Saccharomyces cerevisiae GN=URK1... [more]
URK1_SCHPO3.929e-1532.72Uridine kinase OS=Schizosaccharomyces pombe GN=urk... [more]
URK_UREPA5.132e-1528.40Uridine kinase OS=Ureaplasma parvum GN=udk PE=3 SV... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_016C09_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_016_T7_C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885543 ID=CV885543; Name=CV885543; organism=Citrus sinensis; type=EST; length=921bp
CCCAAAACCCCAGAAGCCTCTGTTCATCTTGATTCCTAAGAATTCACTGT
TCCAAAAAAAGAAAAAAAAAATCAAAGAAAAGCAAGGGAGGGAATATATA
TTGTGGAACTTATATGGCTCAGGACACTTCTTCAGGTGCTGATTCACCTC
GACGACGACCTGGTCTGTTGCGAGATCAGGTTCAGTTGGTTAAGAAGAAG
GACTCTGATCGCTATGAGATTGTTCCTATAGAAGATACATTGTCATTTGA
AAAAGGTTTTTTCATAGTAATTCGTGCATGCCAATTGTTGGCTCAAAAGA
ATCATGGGATAATATTAGTTGGAGTAGCAGGTCCCTCCGGAGCTGGAAAG
ACTGTCTTCACTGAGAAGGTGCTCAACTTTATGCCCAGTATTGCTGTGAT
AACCATGGACAACTACAACGATTCTAGTCGTATCATTGATGGCAACTTCG
ATGACCCGCGCTTGACAGATTATGACACACTGCTTGAAAACATTCGTGGT
TTAAAGGAAGGGAAAGCTGTTCAAGTCCCAATTTACGACTTCAAGTCTAG
TTCTCGCATTGGTTACAGGACACTTGAAGTCCCTAGCTCCCGCATTGTGA
TTATTGAAGGCATCTATGCCTTAAGTGAAAAACTGCGGCCTTTGATAGAT
CTTCGTGTATCTGTTACGGGTGGAGTTCATTTTGATCTCGTAAAGCGAGT
TTTTCGTGACATTCAACGTGTTGGCCAAGAGCCTGAAGAGATAATCCATC
AAATATCTGAAACGGTTTTTGCACTTATCTCATGATAAGATTGTTTTCTG
TTGGCTTTCTTACTGAGTTTCTTCAGTCATTCGGTTGCCAATTGTAATTG
ATAAAGATTTTCTTTTTTTCCTCTTTTCACTTCCATCCTAATATAGCAGT
TTCAAATATTTCTTTTTTGCA
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