CV885523 | Citrus Genome Database

Overview


Name	CV885523
Unique Name	CV885523
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	910

Libraries


Library Name	Type
Ruby Orange Developing Flower cDNA Library UCRCS04-UCR	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of CV885523 vs. ExPASy Swiss-Prot
Match: ACT1_MAIZE (Actin-1 OS=Zea mays GN=ACT1 PE=3 SV=1)

HSP 1 Score: 361.688 bits (927), Expect = 6.600e-141
Identity = 178/193 (92.23%), Postives = 185/193 (95.85%), Query Frame = 3

Query:   69 MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDAL*K 647
            MAD EDIQP+VCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQ+KRGILTLKYPIEHGIV+NWDDME  WHHTFYNELRV+PE+HPVLLTEAPLNPKANREKMTQIMFETF  PAMYVAI+AVLSLYASGRTTGIV+DSGDGVSHTVPIYEGY LPHAILRLDLAGRDLTD L K
Sbjct:    1 MAD-EDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQAKRGILTLKYPIEHGIVNNWDDMEN-WHHTFYNELRVSPEDHPVLLTEAPLNPKANREKMTQIMFETFECPAMYVAIEAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYTLPHAILRLDLAGRDLTDHLMK 191

HSP 2 Score: 161.384 bits (407), Expect = 6.600e-141
Identity = 76/91 (83.52%), Postives = 87/91 (95.60%), Query Frame = 2

Query:  638 LMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTY 910
            LMKILTERGYS TT+AEREIVRD+KEKLAY+ALDYEQELETAK+SS+VEKSYE+PDGQVITIG+ERFRCPEVLFQPS++GME+  +HE TY
Sbjct:  189 LMKILTERGYSLTTSAEREIVRDIKEKLAYVALDYEQELETAKSSSSVEKSYEMPDGQVITIGSERFRCPEVLFQPSLVGMESPSVHEATY 279

[Close]

BLAST of CV885523 vs. ExPASy Swiss-Prot
Match: ACT3_PODCA (Actin-3 OS=Podocoryne carnea GN=ACT3 PE=3 SV=1)

HSP 1 Score: 361.303 bits (926), Expect = 6.600e-141
Identity = 177/193 (91.71%), Postives = 185/193 (95.85%), Query Frame = 3

Query:   69 MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDAL*K 647
            MAD +D+  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI+RLDLAGRDLTD + K
Sbjct:    1 MAD-DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIIRLDLAGRDLTDYMMK 192

HSP 2 Score: 161.77 bits (408), Expect = 6.600e-141
Identity = 77/91 (84.62%), Postives = 87/91 (95.60%), Query Frame = 2

Query:  638 LMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTY 910
            +MKILTERGYSFTTTAEREIVRD+KEKLAY+ALD+EQE++TA TSS++EKSYELPDGQVITIG ERFRCPE LFQP+ IGME+AGIHETTY
Sbjct:  190 MMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEQEMQTAVTSSSLEKSYELPDGQVITIGNERFRCPETLFQPAFIGMESAGIHETTY 280

[Close]

BLAST of CV885523 vs. ExPASy Swiss-Prot
Match: ACT8_SOLTU (Actin-79 (Fragment) OS=Solanum tuberosum PE=3 SV=1)

HSP 1 Score: 348.591 bits (893), Expect = 8.617e-141
Identity = 171/173 (98.84%), Postives = 171/173 (98.84%), Query Frame = 3

Query:  129 AGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDAL*K 647
            AGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD L K
Sbjct:    1 AGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMK 173

HSP 2 Score: 174.096 bits (440), Expect = 8.617e-141
Identity = 86/91 (94.51%), Postives = 90/91 (98.90%), Query Frame = 2

Query:  638 LMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTY 910
            LMKILTERGYSFTTTAEREIVRD+KEKL+YIALDYEQE+ETAKTSS+VEKSYELPDGQVI IGAERFRCPEVLFQPSMIGMEAAGIHETTY
Sbjct:  171 LMKILTERGYSFTTTAEREIVRDVKEKLSYIALDYEQEIETAKTSSSVEKSYELPDGQVIPIGAERFRCPEVLFQPSMIGMEAAGIHETTY 261

[Close]

BLAST of CV885523 vs. ExPASy Swiss-Prot
Match: ACT9_SOLTU (Actin-82 (Fragment) OS=Solanum tuberosum PE=3 SV=1)

HSP 1 Score: 347.821 bits (891), Expect = 8.617e-141
Identity = 170/173 (98.27%), Postives = 171/173 (98.84%), Query Frame = 3

Query:  129 AGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDAL*K 647
            AGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV+DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD L K
Sbjct:    1 AGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMK 173

HSP 2 Score: 174.866 bits (442), Expect = 8.617e-141
Identity = 86/91 (94.51%), Postives = 91/91 (100.00%), Query Frame = 2

Query:  638 LMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTY 910
            LMKILTERGYSFTTTAEREIVRD+KEKL+YIALDYEQEL+T+KTSS+VEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTY
Sbjct:  171 LMKILTERGYSFTTTAEREIVRDVKEKLSYIALDYEQELDTSKTSSSVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTY 261

[Close]

BLAST of CV885523 vs. ExPASy Swiss-Prot
Match: ACT1_ACACA (Actin-1 OS=Acanthamoeba castellanii PE=3 SV=1)

HSP 1 Score: 365.155 bits (936), Expect = 1.124e-140
Identity = 177/189 (93.65%), Postives = 184/189 (97.35%), Query Frame = 3

Query:   81 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDAL*K 647
            +++Q LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTD L K
Sbjct:    3 DEVQALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 191

HSP 2 Score: 157.147 bits (396), Expect = 1.124e-140
Identity = 76/91 (83.52%), Postives = 84/91 (92.31%), Query Frame = 2

Query:  638 LMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTY 910
            LMKILTERGYSFTTTAEREIVRD+KEKL Y+ALD+EQE+ TA +SSA+EKSYELPDGQVITIG ERFR PE LFQPS +GME+AGIHETTY
Sbjct:  189 LMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMHTAASSSALEKSYELPDGQVITIGNERFRAPEALFQPSFLGMESAGIHETTY 279

[Close]

BLAST of CV885523 vs. ExPASy Swiss-Prot
Match: ACTC_BIOPF (Actin, cytoplasmic OS=Biomphalaria pfeifferi PE=3 SV=1)

HSP 1 Score: 362.459 bits (929), Expect = 1.124e-140
Identity = 176/189 (93.12%), Postives = 182/189 (96.30%), Query Frame = 3

Query:   81 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDAL*K 647
            ED+  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAI+RLDLAGRDLTD L K
Sbjct:    4 EDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMK 192

HSP 2 Score: 159.844 bits (403), Expect = 1.124e-140
Identity = 76/91 (83.52%), Postives = 85/91 (93.41%), Query Frame = 2

Query:  638 LMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTY 910
            LMKILTERGYSFTTTAEREIVRD+KEKL Y+ALD+EQE+ TA TSS++EKSYELPDGQVITIG ERFRCPE +FQPS +GME+AGIHETTY
Sbjct:  190 LMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMHTAATSSSLEKSYELPDGQVITIGNERFRCPEAVFQPSFLGMESAGIHETTY 280

[Close]

BLAST of CV885523 vs. ExPASy Swiss-Prot
Match: ACTC_HELTI (Actin, cytoplasmic OS=Helisoma trivolvis PE=3 SV=1)

HSP 1 Score: 361.688 bits (927), Expect = 1.467e-140
Identity = 175/189 (92.59%), Postives = 182/189 (96.30%), Query Frame = 3

Query:   81 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDAL*K 647
            ED+  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLDLAGRDLTD L K
Sbjct:    4 EDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVIDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMK 192

HSP 2 Score: 160.229 bits (404), Expect = 1.467e-140
Identity = 75/91 (82.42%), Postives = 86/91 (94.51%), Query Frame = 2

Query:  638 LMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTY 910
            LMKILTERGYSFTTTAEREIVRD+KEKL Y+ALD+EQE++TA TSS++EKSYELPDGQVITIG ERFRCPE ++QPS +GME+AGIHETTY
Sbjct:  190 LMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTASTSSSLEKSYELPDGQVITIGNERFRCPEAMYQPSFLGMESAGIHETTY 280

[Close]

BLAST of CV885523 vs. ExPASy Swiss-Prot
Match: ACT_HYDAT (Actin, non-muscle 6.2 OS=Hydra attenuata PE=3 SV=1)

HSP 1 Score: 360.533 bits (924), Expect = 1.467e-140
Identity = 178/193 (92.23%), Postives = 184/193 (95.34%), Query Frame = 3

Query:   69 MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDAL*K 647
            MAD E +  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI+RLDLAGRDLTD L K
Sbjct:    1 MADDE-VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIIRLDLAGRDLTDYLMK 192

HSP 2 Score: 161.384 bits (407), Expect = 1.467e-140
Identity = 77/91 (84.62%), Postives = 87/91 (95.60%), Query Frame = 2

Query:  638 LMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTY 910
            LMKILTERGYSFTTTAEREIVRD+KEKL+Y+ALD+EQE++TA +SS++EKSYELPDGQVITIG ERFRCPE LFQPS IGME+AGIHETTY
Sbjct:  190 LMKILTERGYSFTTTAEREIVRDIKEKLSYVALDFEQEMQTAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTY 280

[Close]

BLAST of CV885523 vs. ExPASy Swiss-Prot
Match: ACT_CHLRE (Actin OS=Chlamydomonas reinhardtii PE=2 SV=1)

HSP 1 Score: 368.237 bits (944), Expect = 1.914e-140
Identity = 178/193 (92.23%), Postives = 186/193 (96.37%), Query Frame = 3

Query:   69 MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDAL*K 647
            MAD  ++  LVCDNG+GMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKD+YVGDEAQSKRGILTL+YPIEHGIV+NWDDMEKIWHHTF+NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTD L K
Sbjct:    1 MADEGEVSALVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQSKRGILTLRYPIEHGIVTNWDDMEKIWHHTFFNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 193

HSP 2 Score: 153.295 bits (386), Expect = 1.914e-140
Identity = 73/91 (80.22%), Postives = 84/91 (92.31%), Query Frame = 2

Query:  638 LMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTY 910
            LMKIL ERGYSFTTTAEREIVRD+KEKL Y+ALD+EQE+ TA +SSA+EK+YELPDGQ+ITIG ERFRCPEVLF P+MIGMEA GIH+TT+
Sbjct:  191 LMKILMERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATALSSSALEKTYELPDGQMITIGNERFRCPEVLFNPNMIGMEAVGIHDTTF 281

[Close]

BLAST of CV885523 vs. ExPASy Swiss-Prot
Match: ACT5C_ANOGA (Actin-5C OS=Anopheles gambiae GN=Act5C PE=2 SV=1)

HSP 1 Score: 362.844 bits (930), Expect = 1.914e-140
Identity = 177/189 (93.65%), Postives = 182/189 (96.30%), Query Frame = 3

Query:   81 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDAL*K 647
            E++  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD L K
Sbjct:    4 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 192

HSP 2 Score: 158.688 bits (400), Expect = 1.914e-140
Identity = 76/91 (83.52%), Postives = 84/91 (92.31%), Query Frame = 2

Query:  638 LMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTY 910
            LMKILTERGYSFTTTAEREIVRD+KEKL Y+ALD+EQE+ TA +SS++EKSYELPDGQVITIG ERFRCPE LFQPS +GMEA GIHETTY
Sbjct:  190 LMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTY 280

The following BLAST results are available for this feature:

BLAST of CV885523 vs. ExPASy Swiss-Prot

BLAST of CV885523 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 483


Match Name	E-value	Identity	Description
ACT1_MAIZE	6.600e-141	92.23	Actin-1 OS=Zea mays GN=ACT1 PE=3 SV=1	[more]
ACT3_PODCA	6.600e-141	91.71	Actin-3 OS=Podocoryne carnea GN=ACT3 PE=3 SV=1	[more]
ACT8_SOLTU	8.617e-141	98.84	Actin-79 (Fragment) OS=Solanum tuberosum PE=3 SV=1	[more]
ACT9_SOLTU	8.617e-141	98.27	Actin-82 (Fragment) OS=Solanum tuberosum PE=3 SV=1	[more]
ACT1_ACACA	1.124e-140	93.65	Actin-1 OS=Acanthamoeba castellanii PE=3 SV=1	[more]
ACTC_BIOPF	1.124e-140	93.12	Actin, cytoplasmic OS=Biomphalaria pfeifferi PE=3 ...	[more]
ACTC_HELTI	1.467e-140	92.59	Actin, cytoplasmic OS=Helisoma trivolvis PE=3 SV=1	[more]
ACT_HYDAT	1.467e-140	92.23	Actin, non-muscle 6.2 OS=Hydra attenuata PE=3 SV=1	[more]
ACT_CHLRE	1.914e-140	92.23	Actin OS=Chlamydomonas reinhardtii PE=2 SV=1	[more]
ACT5C_ANOGA	1.914e-140	93.65	Actin-5C OS=Anopheles gambiae GN=Act5C PE=2 SV=1	[more]

Pages

Properties


Property Name	Value
Genbank description	UCRCS04_2_016B10_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_016_T3_B10, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CV885523 ID=CV885523; Name=CV885523; organism=Citrus sinensis; type=EST; length=910bp
GAGAGAGAATCAGAACAGAAACAAAAGAAAGAAAAACATTTTTTTTTTTA
GAAATTCGAAGTTAGAAAATGGCAGATACTGAGGATATTCAGCCTCTTGT
TTGTGACAATGGGACTGGAATGGTGAAGGCTGGATTTGCCGGAGATGATG
CTCCAAGAGCTGTGTTCCCCAGCATTGTGGGTCGCCCTCGCCACACTGGA
GTTATGGTTGGTATGGGTCAGAAAGATGCCTATGTTGGTGATGAGGCTCA
ATCCAAAAGAGGTATTTTGACTTTGAAATACCCAATCGAGCATGGCATTG
TTAGCAACTGGGACGATATGGAGAAAATCTGGCATCACACATTTTATAAT
GAGCTTCGTGTGGCTCCGGAAGAGCATCCGGTTCTTCTCACTGAGGCTCC
CCTTAATCCAAAGGCCAATCGTGAGAAGATGACACAGATTATGTTTGAGA
CCTTTAACACCCCTGCTATGTATGTTGCTATCCAGGCTGTGCTTTCTCTC
TATGCTAGCGGTCGTACAACTGGTATTGTTCTGGACTCTGGAGATGGTGT
CAGCCACACAGTTCCCATCTATGAAGGTTATGCCCTTCCACACGCCATCC
TCCGACTGGACCTGGCAGGTCGTGACCTTACAGACGCCTTATGAAAATCT
TAACCGAGCGTGGTTATTCTTTCACCACAACTGCTGAGCGGGAAATTGTT
AGGGACATGAAGGAGAAATTAGCCTACATTGCTCTTGACTATGAACAAGA
GCTAGAGACAGCAAAGACCAGCTCAGCTGTGGAGAAGAGCTATGAACTAC
CTGATGGGCAGGTCATCACTATTGGGGCTGAACGATTCAGGTGTCCAGAA
GTCCTCTTCCAACCATCCATGATCGGGATGGAAGCTGCTGGCATTCATGA
AACAACATAC