EY665411 | Citrus Genome Database

Overview


Name	EY665411
Unique Name	EY665411
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	979

Libraries


Library Name	Type
Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2)	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

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BLAST of EY665411 vs. ExPASy Swiss-Prot
Match: HSP72_CANAL (Heat shock protein SSA2 OS=Candida albicans GN=SSA2 PE=1 SV=3)

HSP 1 Score: 259.225 bits (661), Expect = 2.594e-68
Identity = 145/221 (65.61%), Postives = 163/221 (73.76%), Query Frame = 1

Query:  112 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGAGDKPMIVVNYKGEEEQFSAEEISSMVLNKMKEIAEAYLGTTIKNAVVTVPAYFNDSQRQATKDAGVISXLKCDAY*LTNPTAAAIALWAGKKRQEITG*KKKGPLF*IWGGGTFGRPPLFDPFEEGFF 774
            A+GIDLGTTYSCV  + +DRVEIIANDQGNRTTPS+VAFTDTERLIGDAAKNQ AMNP NTVFDAKRLIGR+F D  VQ D+K +PFKV+  A  KPMI V YKGE + FS EEISSM+L KMKE AE +LGTT+K+AVVTVPAYFNDSQRQATKDAG I+ L      +  PTAAAIA    KK +      +K  L    GGGTF    L    E+G F
Sbjct:    4 AVGIDLGTTYSCVAHFANDRVEIIANDQGNRTTPSFVAFTDTERLIGDAAKNQAAMNPANTVFDAKRLIGRKFDDHEVQGDIKHFPFKVVDKA-SKPMIQVEYKGETKTFSPEEISSMILGKMKETAEGFLGTTVKDAVVTVPAYFNDSQRQATKDAGTIAGLNVMRI-INEPTAAAIAYGLDKKSE-----AEKNVLIFDLGGGTFDVSLL--SIEDGIF 215

[Close]

BLAST of EY665411 vs. ExPASy Swiss-Prot
Match: HSP71_CANAL (Heat shock protein SSA1 OS=Candida albicans GN=SSA1 PE=1 SV=2)

HSP 1 Score: 258.84 bits (660), Expect = 3.387e-68
Identity = 147/221 (66.52%), Postives = 163/221 (73.76%), Query Frame = 1

Query:  112 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGAGDKPMIVVNYKGEEEQFSAEEISSMVLNKMKEIAEAYLGTTIKNAVVTVPAYFNDSQRQATKDAGVISXLKCDAY*LTNPTAAAIALWAGKKRQEITG*KKKGPLF*IWGGGTFGRPPLFDPFEEGFF 774
            A+GIDLGTTYSCV  + +DRVEIIANDQGNRTTPS+VAFTDTERLIGDAAKNQ AMNP NTVFDAKRLIGR+F DP V +D K +PFKVI  AG KP+I V YKGE + FS EEISSMVL KMKEIAE YLG+T+K+AVVTVPAYFNDSQRQATKDAG I+ L      +  PTAAAIA    KK        +   L    GGGTF    L    +EG F
Sbjct:    4 AVGIDLGTTYSCVAHFANDRVEIIANDQGNRTTPSFVAFTDTERLIGDAAKNQAAMNPANTVFDAKRLIGRKFDDPEVINDAKHFPFKVIDKAG-KPVIQVEYKGETKTFSPEEISSMVLTKMKEIAEGYLGSTVKDAVVTVPAYFNDSQRQATKDAGTIAGLNVLRI-INEPTAAAIAYGLDKKGSR----GEHNVLIFDLGGGTFDVSLL--AIDEGIF 216

[Close]

BLAST of EY665411 vs. ExPASy Swiss-Prot
Match: HSP76_HUMAN (Heat shock 70 kDa protein 6 OS=Homo sapiens GN=HSPA6 PE=1 SV=2)

HSP 1 Score: 256.914 bits (655), Expect = 1.287e-67
Identity = 136/207 (65.70%), Postives = 162/207 (78.26%), Query Frame = 1

Query:  112 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGAGDKPMIVVNYKGEEEQFSAEEISSMVLNKMKEIAEAYLGTTIKNAVVTVPAYFNDSQRQATKDAGVISXLKCDAY*LTNPTAAAIALWAGKKRQEITG*KKKGPLF*IWGGGTF 732
            A+GIDLGTTYSCVGV+Q  RVEI+ANDQGNRTTPSYVAFTDTERL+GDAAK+Q A+NP NTVFDAKRLIGR+F+D +VQSDMK WPF+V++  G KP + V Y+GE++ F  EEISSMVL+KMKE AEAYLG  +K+AV+TVPAYFNDSQRQATKDAG I+ L      +  PTAAAIA    ++     G  ++  L    GGGTF
Sbjct:    8 AVGIDLGTTYSCVGVFQQGRVEILANDQGNRTTPSYVAFTDTERLVGDAAKSQAALNPHNTVFDAKRLIGRKFADTTVQSDMKHWPFRVVS-EGGKPKVRVCYRGEDKTFYPEEISSMVLSKMKETAEAYLGQPVKHAVITVPAYFNDSQRQATKDAGAIAGLNVLRI-INEPTAAAIAYGLDRR-----GAGERNVLIFDLGGGTF 207

[Close]

BLAST of EY665411 vs. ExPASy Swiss-Prot
Match: HSP74_YEAST (Heat shock protein SSA4 OS=Saccharomyces cerevisiae GN=SSA4 PE=1 SV=3)

HSP 1 Score: 256.914 bits (655), Expect = 1.287e-67
Identity = 140/207 (67.63%), Postives = 157/207 (75.85%), Query Frame = 1

Query:  112 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGAGDKPMIVVNYKGEEEQFSAEEISSMVLNKMKEIAEAYLGTTIKNAVVTVPAYFNDSQRQATKDAGVISXLKCDAY*LTNPTAAAIALWAGKKRQEITG*KKKGPLF*IWGGGTF 732
            A+GIDLGTTYSCV  + +DRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ AMNP NTVFDAKRLIGR+F DP V +D K +PFKVI   G KP++ V YKGE + F+ EEISSM+L KMKE AE +LGT +K+AVVTVPAYFNDSQRQATKDAG I+ L      +  PTAAAIA    KK Q     K+   L    GGGTF
Sbjct:    4 AVGIDLGTTYSCVAHFANDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQAAMNPHNTVFDAKRLIGRKFDDPEVTNDAKHYPFKVI-DKGGKPVVQVEYKGETKTFTPEEISSMILTKMKETAENFLGTEVKDAVVTVPAYFNDSQRQATKDAGTIAGLNVLRI-INEPTAAAIAYGLDKKSQ-----KEHNVLIFDLGGGTF 203

[Close]

BLAST of EY665411 vs. ExPASy Swiss-Prot
Match: HSP70_CERCA (Heat shock protein 70 OS=Ceratitis capitata PE=2 SV=1)

HSP 1 Score: 256.529 bits (654), Expect = 1.681e-67
Identity = 137/207 (66.18%), Postives = 157/207 (75.85%), Query Frame = 1

Query:  112 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGAGDKPMIVVNYKGEEEQFSAEEISSMVLNKMKEIAEAYLGTTIKNAVVTVPAYFNDSQRQATKDAGVISXLKCDAY*LTNPTAAAIALWAGKKRQEITG*KKKGPLF*IWGGGTF 732
            AIGIDLGTTYSC GV+QH +VEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP NTVFDAKRLIGR++ DP +  D+K WPFKV++  G KP I V YK E +QF+ EEISSMVL KMKE AE  LGTT+ +AV+TVPAYFNDSQRQATKDAG I+ L      +  PTAAA+A    K  +      ++  L    GGGTF
Sbjct:    3 AIGIDLGTTYSCFGVFQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPKNTVFDAKRLIGRKYDDPKIMEDVKHWPFKVVSDGG-KPKISVEYKEENKQFAPEEISSMVLTKMKETAEVILGTTVTDAVITVPAYFNDSQRQATKDAGRIAGLNVLRI-INEPTAAALAYGLDKNLK-----GERNVLIFDLGGGTF 202

[Close]

BLAST of EY665411 vs. ExPASy Swiss-Prot
Match: HSP76_SAGOE (Heat shock 70 kDa protein 6 OS=Saguinus oedipus GN=HSPA6 PE=2 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 2.196e-67
Identity = 135/207 (65.22%), Postives = 163/207 (78.74%), Query Frame = 1

Query:  112 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGAGDKPMIVVNYKGEEEQFSAEEISSMVLNKMKEIAEAYLGTTIKNAVVTVPAYFNDSQRQATKDAGVISXLKCDAY*LTNPTAAAIALWAGKKRQEITG*KKKGPLF*IWGGGTF 732
            A+GIDLGTTYSCVGV+Q  RVEI+ANDQGNRTTPSYVAFTDTERL+GDAAK+Q A+NP NTVFDAKRLIGR+F+D +VQ+DMK WPF+V++  G KP + V+Y+GE++ F  EEISSMVL+KMKE AEAYLG  +K+AV+TVPAYFNDSQRQATKDAG I+ L      +  PTAAAIA    ++     G  ++  L    GGGTF
Sbjct:    8 AVGIDLGTTYSCVGVFQQGRVEILANDQGNRTTPSYVAFTDTERLVGDAAKSQAALNPLNTVFDAKRLIGRKFADATVQADMKHWPFQVVS-EGCKPKVRVSYRGEDKSFYPEEISSMVLSKMKETAEAYLGQPVKHAVITVPAYFNDSQRQATKDAGAIAGLNVLRI-INEPTAAAIAHGLDRR-----GAGERNVLIFDLGGGTF 207

[Close]

BLAST of EY665411 vs. ExPASy Swiss-Prot
Match: HSP73_YEAST (Heat shock protein SSA3 OS=Saccharomyces cerevisiae GN=SSA3 PE=1 SV=3)

HSP 1 Score: 254.218 bits (648), Expect = 8.343e-67
Identity = 139/207 (67.15%), Postives = 158/207 (76.33%), Query Frame = 1

Query:  112 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGAGDKPMIVVNYKGEEEQFSAEEISSMVLNKMKEIAEAYLGTTIKNAVVTVPAYFNDSQRQATKDAGVISXLKCDAY*LTNPTAAAIALWAGKKRQEITG*KKKGPLF*IWGGGTF 732
            A+GIDLGTTYSCV  + +DRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ A+NP NTVFDAKRLIGR+F DP V +D K +PFKVI+  G KP++ V YKGE + F+ EEISSMVL+KMKE AE YLGTT+ +AVVTVPAYFNDSQRQATKDAG I+ +      +  PTAAAIA    KK     G  +   L    GGGTF
Sbjct:    4 AVGIDLGTTYSCVAHFSNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQAAINPHNTVFDAKRLIGRKFDDPEVTTDAKHFPFKVISRDG-KPVVQVEYKGETKTFTPEEISSMVLSKMKETAENYLGTTVNDAVVTVPAYFNDSQRQATKDAGTIAGMNVLRI-INEPTAAAIAYGLDKK-----GRAEHNVLIFDLGGGTF 203

[Close]

BLAST of EY665411 vs. ExPASy Swiss-Prot
Match: HSP72_PICAN (Heat shock protein 70 2 OS=Pichia angusta GN=HSA2 PE=3 SV=2)

HSP 1 Score: 253.447 bits (646), Expect = 1.423e-66
Identity = 141/221 (63.80%), Postives = 164/221 (74.21%), Query Frame = 1

Query:  112 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGAGDKPMIVVNYKGEEEQFSAEEISSMVLNKMKEIAEAYLGTTIKNAVVTVPAYFNDSQRQATKDAGVISXLKCDAY*LTNPTAAAIALWAGKKRQEITG*KKKGPLF*IWGGGTFGRPPLFDPFEEGFF 774
            A+GID GTTYSCV  + +DRVEIIANDQGNRTTPS+VAFTDTERL GDAAKNQ AMNP NTVFDAKRLIGR+F DP VQ D+K +PFKV+  +G KP I V +KGE + F+ EEISSMVL KMKE AE++LGTT+K+AV+TVPAYFNDSQRQATKDAG+I+ L      +  PTAAAIA    KK Q      ++  L    GGGTF    L    E+G F
Sbjct:    4 AVGIDGGTTYSCVAHFANDRVEIIANDQGNRTTPSFVAFTDTERLSGDAAKNQAAMNPANTVFDAKRLIGRKFDDPEVQGDIKHFPFKVVDKSG-KPQIQVEFKGETKVFTPEEISSMVLTKMKETAESFLGTTVKDAVITVPAYFNDSQRQATKDAGLIAGLNVMRI-INEPTAAAIAYGLDKKSQ-----GEQNVLIFDLGGGTFDVSLL--SIEDGIF 215

[Close]

BLAST of EY665411 vs. ExPASy Swiss-Prot
Match: HSP71_PICAN (Heat shock protein 70 1 OS=Pichia angusta GN=HSA1 PE=1 SV=2)

HSP 1 Score: 252.677 bits (644), Expect = 2.428e-66
Identity = 141/221 (63.80%), Postives = 164/221 (74.21%), Query Frame = 1

Query:  112 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGAGDKPMIVVNYKGEEEQFSAEEISSMVLNKMKEIAEAYLGTTIKNAVVTVPAYFNDSQRQATKDAGVISXLKCDAY*LTNPTAAAIALWAGKKRQEITG*KKKGPLF*IWGGGTFGRPPLFDPFEEGFF 774
            A+GIDLGTTYSCV  + +DRVEIIANDQGNRTTPS+VAFTDTERLIGDAAKNQ AMNP NTVFDAKRLIGR+F DP VQ+D+K +PFKV+   G KP I V +KGE + F+ EEISSMVL KMKE AE+Y+G  + +AV+TVPAYFNDSQRQATKDAG+I+ L      +  PTAAAIA    KK Q   G  ++  L    GGGTF    L    +EG F
Sbjct:    4 AVGIDLGTTYSCVAHFVNDRVEIIANDQGNRTTPSFVAFTDTERLIGDAAKNQAAMNPANTVFDAKRLIGRKFDDPEVQNDIKHFPFKVVE-KGGKPHIQVEFKGETKVFTPEEISSMVLTKMKETAESYMGGKVTDAVITVPAYFNDSQRQATKDAGLIAGLNVLRI-INEPTAAAIAYGLDKKEQ---GKGEQNILIFDLGGGTFDVSLL--SIDEGIF 217

[Close]

BLAST of EY665411 vs. ExPASy Swiss-Prot
Match: HSP77_HUMAN (Putative heat shock 70 kDa protein 7 OS=Homo sapiens GN=HSPA7 PE=5 SV=2)

HSP 1 Score: 251.521 bits (641), Expect = 5.408e-66
Identity = 134/207 (64.73%), Postives = 161/207 (77.78%), Query Frame = 1

Query:  112 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGAGDKPMIVVNYKGEEEQFSAEEISSMVLNKMKEIAEAYLGTTIKNAVVTVPAYFNDSQRQATKDAGVISXLKCDAY*LTNPTAAAIALWAGKKRQEITG*KKKGPLF*IWGGGTF 732
            A+GIDLGTTYSCVGV+Q  RVEI+ANDQGNRTTPSYVAFTDTERL+GDAAK+Q A+NP NTVFDAKRLIGR+F+D +VQSDMK WPF+V++  G KP + V Y+GE++ F  EEISSMVL+KMKE AEAYLG  +K+AV+TVP YF++SQRQATKDAG I+ LK     +   TAAAIA    ++     G  K+  L    GGGTF
Sbjct:    8 AVGIDLGTTYSCVGVFQQGRVEILANDQGNRTTPSYVAFTDTERLVGDAAKSQAALNPHNTVFDAKRLIGRKFADTTVQSDMKHWPFQVVS-EGGKPKVRVCYRGEDKTFYPEEISSMVLSKMKETAEAYLGQPVKHAVITVPTYFSNSQRQATKDAGAIAGLKVLPI-INEATAAAIAYGLDRR-----GAGKRNVLIFDLGGGTF 207

The following BLAST results are available for this feature:

BLAST of EY665411 vs. ExPASy Swiss-Prot

BLAST of EY665411 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500


Match Name	E-value	Identity	Description
HSP72_CANAL	2.594e-68	65.61	Heat shock protein SSA2 OS=Candida albicans GN=SSA...	[more]
HSP71_CANAL	3.387e-68	66.52	Heat shock protein SSA1 OS=Candida albicans GN=SSA...	[more]
HSP76_HUMAN	1.287e-67	65.70	Heat shock 70 kDa protein 6 OS=Homo sapiens GN=HSP...	[more]
HSP74_YEAST	1.287e-67	67.63	Heat shock protein SSA4 OS=Saccharomyces cerevisia...	[more]
HSP70_CERCA	1.681e-67	66.18	Heat shock protein 70 OS=Ceratitis capitata PE=2 S...	[more]
HSP76_SAGOE	2.196e-67	65.22	Heat shock 70 kDa protein 6 OS=Saguinus oedipus GN...	[more]
HSP73_YEAST	8.343e-67	67.15	Heat shock protein SSA3 OS=Saccharomyces cerevisia...	[more]
HSP72_PICAN	1.423e-66	63.80	Heat shock protein 70 2 OS=Pichia angusta GN=HSA2 ...	[more]
HSP71_PICAN	2.428e-66	63.80	Heat shock protein 70 1 OS=Pichia angusta GN=HSA1 ...	[more]
HSP77_HUMAN	5.408e-66	64.73	Putative heat shock 70 kDa protein 7 OS=Homo sapie...	[more]

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Properties


Property Name	Value
Genbank description	CS00-C1-101-007-F05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY665411 ID=EY665411; Name=EY665411; organism=Citrus sinensis; type=EST; length=979bp
CAATCAATAAGTAAACACTAAAGCTCGCAAATCATCCGTGCTTTTTTTCT
TTTTTTATTGTTGATAGATTCTTGATTTTGTTAATCGATGGCTGGAAAAG
GCGAAGGTCCTGCTATTGGAATTGACTTGGGCACGACTTACTCCTGTGTC
GGTGTGTGGCAACATGATCGAGTTGAGATCATCGCTAATGATCAAGGTAA
CCGAACGACGCCGTCTTATGTGGCGTTTACTGACACTGAGCGTTTGATCG
GTGACGCTGCCAAGAACCAGGTCGCCATGAACCCCACCAACACTGTTTTT
GATGCTAAGCGTTTGATTGGGAGGCGATTCAGTGATCCTTCAGTACAGAG
TGACATGAAACTATGGCCGTTCAAGGTCATTGCTGGAGCAGGTGACAAGC
CTATGATCGTTGTCAATTACAAAGGCGAAGAAGAGCAATTTTCTGCGGAA
GAAATCTCCTCAATGGTTCTTAATAAGATGAAAGAGATTGCTGAGGCTTA
TCTGGGCACTACTATTAAGAATGCTGTTGTCACAGTACCTGCTTACTTTA
ATGACTCACAGCGTCAAGCCACGAAGGACGCTGGTGTTATTTCTTNCCTT
AAATGTGATGCGTATTAATTAACGAACCCAACAGCTGCTGCTATTGCTTT
ATGGGCTGGAAAAAAAAGGCAGGAAATAACTGGGTGAAAAAAAAAGGGGC
CCCTTTTTTGAATCTGGGGGGGGGGAACTTTTGGAAGGCCCCCCCTTTTT
GACCCTTTTGAGGAAGGGTTTTTTTCCAAAATGGAAAGGCCTCCTGGGCG
GGGGGAAAACCCCCCTTTGGGGAAGGGTGAAAAAAATTTTTGAACAAACC
AAAAAGGGGGGAAAACCCCCTTTTTGTTTTCTCAGAAAAATTTTCAAAAA
AAAAGGAAAAAAAAAAACAAAAAAAAAGGGGAAAATTTTTTATATGGGGG
GAAAAAAACCCCCCCCCACACAAAAAAGC