EY665408
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665408 vs. ExPASy Swiss-Prot
Match: MDHM_RAT (Malate dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Mdh2 PE=1 SV=2) HSP 1 Score: 145.976 bits (367), Expect = 3.338e-34 Identity = 82/165 (49.70%), Postives = 108/165 (65.45%), Query Frame = 2 Query: 80 KVAVLGAAGGIGQPLAMLMNINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLFEGIAKWXXXXXXXXXXXXXXXPQFPLLVKVFKKVGPYRS*TDFWESQGVGVVQAKNFLG-VEGLE 571 KVAVLGA+GGIGQPL++L+ +PLVS L LYD+ +TPGV AD+SH++T A V+G+LG +QL D L G D+V+IPAGVPRKPGMTRDDLFN NA IV TL A+ P+ +VFKK G Y F + + +V+A F+ ++GL+ Sbjct: 26 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRANVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQ-HCPEAMICIISNPVNSTIPITAEVFKKHGVYNPNKIFGVTT-LDIVRANTFVAELKGLD 188
BLAST of EY665408 vs. ExPASy Swiss-Prot
Match: MDHM_MOUSE (Malate dehydrogenase, mitochondrial OS=Mus musculus GN=Mdh2 PE=1 SV=3) HSP 1 Score: 145.976 bits (367), Expect = 3.338e-34 Identity = 82/165 (49.70%), Postives = 108/165 (65.45%), Query Frame = 2 Query: 80 KVAVLGAAGGIGQPLAMLMNINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLFEGIAKWXXXXXXXXXXXXXXXPQFPLLVKVFKKVGPYRS*TDFWESQGVGVVQAKNFLG-VEGLE 571 KVAVLGA+GGIGQPL++L+ +PLVS L LYD+ +TPGV AD+SH++T A V+G+LG +QL D L G D+V+IPAGVPRKPGMTRDDLFN NA IV TL A+ P+ +VFKK G Y F + + +V+A F+ ++GL+ Sbjct: 26 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRANVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQ-HCPEAMVCIIANPVNSTIPITAEVFKKHGVYNPNKIFGVTT-LDIVRANTFVAELKGLD 188
BLAST of EY665408 vs. ExPASy Swiss-Prot
Match: MDHM_CAEEL (Probable malate dehydrogenase, mitochondrial OS=Caenorhabditis elegans GN=mdh-1 PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 1.074e-32 Identity = 80/157 (50.96%), Postives = 99/157 (63.06%), Query Frame = 2 Query: 20 AFRSGLGRMDCRAKPWSPGFKVAVLGAAGGIGQPLAMLMNINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLFEGIAKWXXXXXXXXXXXXXXXPQFPLLVKVFKKVGPY 490 A SGL + R +P KVA+LGAAGGIGQPL +L+ +PLV+ L LYDVVNTPGV AD+SH+D+NA V G ++L A+ D+++IPAGVPRKPGMTRDDLFN NAGIV+ L IAK P+ +V KK G Y Sbjct: 12 AANSGLRAVSVRHSSQAP--KVALLGAAGGIGQPLGLLLKQDPLVAHLALYDVVNTPGVAADLSHIDSNAKVTAHTGPKELYAAVENADVIVIPAGVPRKPGMTRDDLFNTNAGIVRDLAAVIAK-ASPKALIAIITNPVNSTVPIASEVLKKAGVY 165
BLAST of EY665408 vs. ExPASy Swiss-Prot
Match: MDHM_CHLRE (Malate dehydrogenase, mitochondrial OS=Chlamydomonas reinhardtii PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 2.392e-32 Identity = 87/173 (50.29%), Postives = 107/173 (61.85%), Query Frame = 2 Query: 74 GFKVAVLGAAGGIGQPLAMLMNINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLFEGIAKWXXXXXXXXXXXXXXXPQFPLLVKVFKKVGPYRS*TDFWESQGV---GVVQAKNFLGVE-GLEVKS 580 G KVAVLGAAGGIGQPL+MLM +N VS L LYD+ TPGV AD+SH++T A V+GF + L +AL G D+VIIPAGVPRKPGMTRDDLF INAGIV+ L + + P+ + KK+G Y D + GV VV+AK F + GL+V S Sbjct: 62 GRKVAVLGAAGGIGQPLSMLMKMNSQVSSLSLYDIAGTPGVAADVSHINTKAQVKGF-DKDGLAEALRGCDLVIIPAGVPRKPGMTRDDLFKINAGIVRDLVTAVGQ-HCPGAVLNIISNPVNSTVPIAAEQLKKMGVY----DKRKVMGVTTLDVVRAKTFYAEKNGLDVAS 228
BLAST of EY665408 vs. ExPASy Swiss-Prot
Match: MDHP_YEAST (Malate dehydrogenase, peroxisomal OS=Saccharomyces cerevisiae GN=MDH3 PE=1 SV=3) HSP 1 Score: 122.479 bits (306), Expect = 3.952e-27 Identity = 73/199 (36.68%), Postives = 120/199 (60.30%), Query Frame = 2 Query: 80 KVAVLGAAGGIGQPLAMLMNINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLFEGIAKWXXXXXXXXXXXXXXXPQFPLLVKVFKKVGPYRS*TDFWESQGVGVVQAKNFLGVEGLEVKSPREAKMIKIREDKERGTKIKPTK----HTGKT 664 KVA+LGA+GG+GQPL++L+ ++P VS L LYD+ G+ D+SH++TN+ G+ + +E+ L+ +V+IPAGVPRKPG+TRDDLF +NAGIVK+L + K+ P+ V+ KK+G ++ + + +V+A+ FL V+ L +K+P KI +++++ T + H+G+T Sbjct: 3 KVAILGASGGVGQPLSLLLKLSPYVSELALYDIRAAEGIGKDLSHINTNSSCVGY-DKDSIENTLSNAQVVLIPAGVPRKPGLTRDDLFKMNAGIVKSLVTAVGKF-APNARILVISNPVNSLVPIAVETLKKMGKFKP-GNVMGVTNLDLVRAETFL-VDYLMLKNP------KIGQEQDKTTMHRKVTVIGGHSGET 191
BLAST of EY665408 vs. ExPASy Swiss-Prot
Match: MDH_COLP3 (Malate dehydrogenase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=mdh PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 5.161e-27 Identity = 78/168 (46.43%), Postives = 103/168 (61.31%), Query Frame = 2 Query: 80 KVAVLGAAGGIGQPLAMLMNIN-PLVSVLHLYDVVNT-PGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLFEGIAKWXXXXXXXXXXXXXXXPQFPLLVKVFKKVGPYRS*TDFWESQGVGVVQAKNFLG-VEGLEV 574 KVAVLGAAGGIGQ L++L+ P S L LYDV PGV D+SH+ T+ V GF G+ L ALTG DIV+IPAG+PRKPGM R DLFN+NAGI+K L EGI P++ +VFKK G Y + F + + V++++ F+ ++GL+V Sbjct: 2 KVAVLGAAGGIGQALSLLLKTQLPAGSELSLYDVAPVVPGVAVDLSHIPTDVKVAGF-GRDDLNGALTGADIVLIPAGMPRKPGMDRADLFNVNAGIIKVLAEGIVA-SCPKALVGVITNPVNGTVPIVAEVFKKAGTYDAARLFGVTT-LDVIRSEAFVAELKGLDV 166
BLAST of EY665408 vs. ExPASy Swiss-Prot
Match: MDHM_SCHPO (Malate dehydrogenase, mitochondrial OS=Schizosaccharomyces pombe GN=MDH1 PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 5.161e-27 Identity = 64/104 (61.54%), Postives = 76/104 (73.08%), Query Frame = 2 Query: 68 SPGFKVAVLGAAGGIGQPLAMLMNINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQ-LEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTL 376 S FKVAVLGA GGIGQPL+ML+ +N VS L L+D+ PGV ADI H++T + V G+ + LE AL G D+VIIPAGVPRKPGMTRDDLF NA IV+ L Sbjct: 26 SRAFKVAVLGAGGGIGQPLSMLLKLNDKVSELALFDIRGAPGVAADIGHINTTSNVVGYAPDDKGLEKALNGADVVIIPAGVPRKPGMTRDDLFATNASIVRDL 129
BLAST of EY665408 vs. ExPASy Swiss-Prot
Match: MDHM_SCHMA (Malate dehydrogenase, mitochondrial (Fragment) OS=Schistosoma mansoni PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 1.209e-26 Identity = 56/99 (56.57%), Postives = 74/99 (74.75%), Query Frame = 2 Query: 98 AAGGIGQPLAMLMNINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLFEGIAK 394 A+GGIG+PL++L+ +PL+S L LYD+ + GV AD+SH++T A V LG +L + LTG ++VIIPAG+PRKPGMTRDDLFN NA IV L + AK Sbjct: 1 ASGGIGEPLSLLLKQSPLISQLALYDIAHVKGVAADLSHIETQAHVTAHLGPGELAECLTGANVVIIPAGLPRKPGMTRDDLFNTNASIVAELIDSCAK 99 HSP 2 Score: 24.2534 bits (51), Expect = 1.209e-26 Identity = 10/20 (50.00%), Postives = 15/20 (75.00%), Query Frame = 1 Query: 406 KPIVNLISNPGNSPVPIAGK 465 K ++ +I+NP NS VPIA + Sbjct: 103 KAMICIITNPVNSTVPIAAE 122
BLAST of EY665408 vs. ExPASy Swiss-Prot
Match: MDHM_YEAST (Malate dehydrogenase, mitochondrial OS=Saccharomyces cerevisiae GN=MDH1 PE=1 SV=2) HSP 1 Score: 117.857 bits (294), Expect = 7.441e-26 Identity = 60/108 (55.56%), Postives = 78/108 (72.22%), Query Frame = 2 Query: 77 FKVAVLGAAGGIGQPLAMLMNINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQ--LEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLFEGIAK 394 +KV VLGA GGIGQPL++L+ +N V+ L LYD+ GV D+SH+ TN+VV+GF ++ L +AL D+V+IPAGVPRKPGMTRDDLF INA IV+ L A+ Sbjct: 18 YKVTVLGAGGGIGQPLSLLLKLNHKVTDLRLYDLKGAKGVATDLSHIPTNSVVKGFTPEEPDGLNNALKDTDMVLIPAGVPRKPGMTRDDLFAINASIVRDLAAATAE 125 HSP 2 Score: 21.557 bits (44), Expect = 7.441e-26 Identity = 9/15 (60.00%), Postives = 11/15 (73.33%), Query Frame = 1 Query: 421 LISNPGNSPVPIAGK 465 +ISNP NS VPI + Sbjct: 134 VISNPVNSTVPIVAQ 148
BLAST of EY665408 vs. ExPASy Swiss-Prot
Match: MDH_IDILO (Malate dehydrogenase OS=Idiomarina loihiensis GN=mdh PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 7.453e-26 Identity = 71/139 (51.08%), Postives = 84/139 (60.43%), Query Frame = 2 Query: 80 KVAVLGAAGGIGQPLAMLMNIN-PLVSVLHLYDVVNT-PGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLFEGIAKWXXXXXXXXXXXXXXXPQFPLLVKVFKKVGPY 490 KVAVLGAAGGIGQ L++L+ P S L LYDV PGV D+SH+ T+ V GF G+ L AL G DIV+IPAGVPRKPGM R DLFN+NAGIVK L +G+A P+ +V KK G Y Sbjct: 2 KVAVLGAAGGIGQALSLLLKTQLPAGSELSLYDVAPVVPGVAVDLSHIPTDVKVTGF-GKDDLASALVGSDIVLIPAGVPRKPGMDRSDLFNMNAGIVKNLVQGVAD-NCPNACVGIITNPVNTTVPIAAEVLKKAGCY 138 The following BLAST results are available for this feature:
BLAST of EY665408 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 156
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665408 ID=EY665408; Name=EY665408; organism=Citrus sinensis; type=EST; length=1006bpback to top |