CV885489
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV885489 vs. ExPASy Swiss-Prot
Match: H2A1_CANAL (Histone H2A.1 OS=Candida albicans GN=HTA1 PE=3 SV=3) HSP 1 Score: 134.42 bits (337), Expect = 5.204e-31 Identity = 65/108 (60.19%), Postives = 78/108 (72.22%), Query Frame = 1 Query: 133 LQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKTGTSGSKAADE 456 L FPVGR+ R L+ G YA+R+G+GAP GNAARDNKK+RI+PRH+QLA+RNDEEL+KLLGDVTIA GGV+PNIH LLPKK+G G KA+ E Sbjct: 24 LTFPVGRVHRLLRKGNYAQRIGSGAPVYLTSVLEYLAAEILELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGDVTIAQGGVLPNIHQNLLPKKSGKGGVKASQE 131
BLAST of CV885489 vs. ExPASy Swiss-Prot
Match: H2A_MAGGR (Histone H2A OS=Magnaporthe grisea GN=HTA1 PE=2 SV=3) HSP 1 Score: 133.65 bits (335), Expect = 8.877e-31 Identity = 68/110 (61.82%), Postives = 79/110 (71.82%), Query Frame = 1 Query: 133 LQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKTG-TSGSKAADED 459 L FPVGR+ R L+ G YA+RVGAGAP GNAARDNKKTRI+PRH+QLA+RNDEEL+KLLG VTIA GGV+PNIH LLPKKTG T+G K A ++ Sbjct: 26 LAFPVGRVHRLLRKGNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKTGKTAGGKNASQE 135
BLAST of CV885489 vs. ExPASy Swiss-Prot
Match: H2AX_DANRE (Histone H2A.x OS=Danio rerio GN=h2afx PE=2 SV=3) HSP 1 Score: 133.65 bits (335), Expect = 8.877e-31 Identity = 72/129 (55.81%), Postives = 83/129 (64.34%), Query Frame = 1 Query: 61 MAGRGKTLXXXXXXXXXXXXXXXXLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKTGTSGSKA 447 M+GRGKT LQFPVGR+ R L+ G YAERVGAGAP GNAARDNKKTRI+PRH+QLAVRNDEEL+KLLG VTIA GGV+PNI +LLPKKTG + + + Sbjct: 1 MSGRGKT-GGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKTGQAAASS 128
BLAST of CV885489 vs. ExPASy Swiss-Prot
Match: H2A_CHAGB (Histone H2A OS=Chaetomium globosum GN=HTA1 PE=3 SV=2) HSP 1 Score: 133.265 bits (334), Expect = 1.159e-30 Identity = 66/108 (61.11%), Postives = 76/108 (70.37%), Query Frame = 1 Query: 133 LQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKTGTSGSKAADE 456 L FPVGR+ R L+ G YA+RVGAGAP GNAARDNKKTRI+PRH+QLA+RNDEEL+KLLG VTIA GGV+PNIH LLPKKTG +G + E Sbjct: 26 LAFPVGRVHRLLRKGNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKTGKTGKTLSQE 133
BLAST of CV885489 vs. ExPASy Swiss-Prot
Match: H2A_GIBZE (Histone H2A OS=Gibberella zeae GN=HTA1 PE=3 SV=3) HSP 1 Score: 132.88 bits (333), Expect = 1.514e-30 Identity = 66/108 (61.11%), Postives = 77/108 (71.30%), Query Frame = 1 Query: 133 LQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKTGTSGSKAADE 456 L FPVGR+ R L+ G YA+RVGAGAP GNAARDNKKTRI+PRH+QLA+RNDEEL+KLLG VTIA GGV+PNIH LLPKKTG +G ++ E Sbjct: 26 LAFPVGRVHRLLRKGNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKTGKTGKTSSME 133
BLAST of CV885489 vs. ExPASy Swiss-Prot
Match: H2A_BOTFB (Histone H2A OS=Botryotinia fuckeliana (strain B05.10) GN=hta1 PE=3 SV=4) HSP 1 Score: 131.724 bits (330), Expect = 3.373e-30 Identity = 67/110 (60.91%), Postives = 78/110 (70.91%), Query Frame = 1 Query: 133 LQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKTG-TSGSKAADED 459 L FPVGR+ R L+ G YA+RVGAGAP GNAARDNKKTRI+PRH+QLA+RNDEEL+KLLG VTIA GGV+PNIH LLPKKT T+G K A ++ Sbjct: 26 LAFPVGRVHRLLRKGNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKTAKTAGGKPASQE 135
BLAST of CV885489 vs. ExPASy Swiss-Prot
Match: H2AX_HUMAN (Histone H2A.x OS=Homo sapiens GN=H2AFX PE=1 SV=2) HSP 1 Score: 131.724 bits (330), Expect = 3.373e-30 Identity = 74/130 (56.92%), Postives = 83/130 (63.85%), Query Frame = 1 Query: 61 MAGRGKTLXXXXXXXXXXXXXXXXLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKT-GTSGSKA 447 M+GRGKT LQFPVGR+ R L+ G YAERVGAGAP GNAARDNKKTRI+PRH+QLA+RNDEEL+KLLG VTIA GGV+PNI +LLPKKT T G KA Sbjct: 1 MSGRGKT-GGKARAKAKSRSSRAGLQFPVGRVHRLLRKGHYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKTSATVGPKA 129
BLAST of CV885489 vs. ExPASy Swiss-Prot
Match: H2A2_PICGU (Histone H2A.2 OS=Pichia guilliermondii GN=HTA2 PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.373e-30 Identity = 67/108 (62.04%), Postives = 78/108 (72.22%), Query Frame = 1 Query: 133 LQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKTGTSGSKAADE 456 L FPVGRI R L+ G YA+RVG+GAP GNAARDNKK+RI+PRH+QLA+RNDEEL+KLLGDVTIA GGV+PNIH LLPKK+G G KA+ E Sbjct: 23 LTFPVGRIHRLLRKGNYAQRVGSGAPVYLTSVLEYLTAEILELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGDVTIAQGGVLPNIHQNLLPKKSG-KGDKASQE 129
BLAST of CV885489 vs. ExPASy Swiss-Prot
Match: H2A2_PSAMI (Late histone H2A.2.1 OS=Psammechinus miliaris PE=2 SV=2) HSP 1 Score: 131.339 bits (329), Expect = 4.406e-30 Identity = 66/101 (65.35%), Postives = 73/101 (72.28%), Query Frame = 1 Query: 133 LQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKTGTS 435 LQFPVGR+ RFLK G Y RVGAGAP GNAARDNKK+RI+PRH+QLAVRNDEEL+KLLG VTIA GGV+PNI +LLPKKTG S Sbjct: 23 LQFPVGRVHRFLKKGNYGNRVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKSRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQTVLLPKKTGKS 123
BLAST of CV885489 vs. ExPASy Swiss-Prot
Match: H2A_NEOFI (Histone H2A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=hta1 PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 5.754e-30 Identity = 66/108 (61.11%), Postives = 75/108 (69.44%), Query Frame = 1 Query: 133 LQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKTGTSGSKAADE 456 L FPVGR+ R L+ G YA+RVGAGAP GNAARDNKKTRI+PRH+QLA+RNDEEL+KLLG VTIA GGV+PNIH LLPKKT SG + E Sbjct: 25 LAFPVGRVHRLLRKGNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKTPKSGKGPSQE 132 The following BLAST results are available for this feature:
BLAST of CV885489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 235
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Sequences
The
following sequences are available for this feature:
EST sequence >CV885489 ID=CV885489; Name=CV885489; organism=Citrus sinensis; type=EST; length=674bpback to top |