CX043270

Overview
NameCX043270
Unique NameCX043270
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length783
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX043270_ssr270 microsatellite CX043270_ssr270:270..287. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1840 contig Csv1_Contig1840:1097..1879. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_BRUO2 (Adenosylhomocysteinase OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=ahcY PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 4.213e-41
Identity = 91/162 (56.17%), Postives = 111/162 (68.52%), Query Frame = -3 
Query:  296 TTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 781
            TTGNKD+I +DHM+KMK+  IV NIGHFDNEI V  L     +K   +KPQ D   FP+    +I+L+EGRL+NLG ATGHPSFVMS SFTNQV+ Q+EL+    T  Y+ +VYVLPKHLDEKV           LT L++EQA YI V+  GP+K  HYRY
Sbjct:  311 TTGNKDVITIDHMRKMKDMCIVGNIGHFDNEIQVAALRN---LKWTNVKPQVDLIEFPD-GKRLILLSEGRLLNLGNATGHPSFVMSASFTNQVLGQIELFTR--TDAYKNEVYVLPKHLDEKVARLHLDKLGAKLTVLSEEQAAYIGVTPQGPFKSEHYRY 466
[Close]
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_BRUME (Adenosylhomocysteinase OS=Brucella melitensis GN=ahcY PE=3 SV=2)

HSP 1 Score: 168.318 bits (425), Expect = 4.213e-41
Identity = 91/162 (56.17%), Postives = 111/162 (68.52%), Query Frame = -3 
Query:  296 TTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 781
            TTGNKD+I +DHM+KMK+  IV NIGHFDNEI V  L     +K   +KPQ D   FP+    +I+L+EGRL+NLG ATGHPSFVMS SFTNQV+ Q+EL+    T  Y+ +VYVLPKHLDEKV           LT L++EQA YI V+  GP+K  HYRY
Sbjct:  311 TTGNKDVITIDHMRKMKDMCIVGNIGHFDNEIQVAALRN---LKWTNVKPQVDLIEFPD-GKRLILLSEGRLLNLGNATGHPSFVMSASFTNQVLGQIELFTR--TDAYKNEVYVLPKHLDEKVARLHLDKLGAKLTVLSEEQAAYIGVTPQGPFKSEHYRY 466
[Close]
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_BRUMB (Adenosylhomocysteinase OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=ahcY PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 4.213e-41
Identity = 91/162 (56.17%), Postives = 111/162 (68.52%), Query Frame = -3 
Query:  296 TTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 781
            TTGNKD+I +DHM+KMK+  IV NIGHFDNEI V  L     +K   +KPQ D   FP+    +I+L+EGRL+NLG ATGHPSFVMS SFTNQV+ Q+EL+    T  Y+ +VYVLPKHLDEKV           LT L++EQA YI V+  GP+K  HYRY
Sbjct:  311 TTGNKDVITIDHMRKMKDMCIVGNIGHFDNEIQVAALRN---LKWTNVKPQVDLIEFPD-GKRLILLSEGRLLNLGNATGHPSFVMSASFTNQVLGQIELFTR--TDAYKNEVYVLPKHLDEKVARLHLDKLGAKLTVLSEEQAAYIGVTPQGPFKSEHYRY 466
[Close]
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_BRUC2 (Adenosylhomocysteinase OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=ahcY PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 4.213e-41
Identity = 91/162 (56.17%), Postives = 111/162 (68.52%), Query Frame = -3 
Query:  296 TTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 781
            TTGNKD+I +DHM+KMK+  IV NIGHFDNEI V  L     +K   +KPQ D   FP+    +I+L+EGRL+NLG ATGHPSFVMS SFTNQV+ Q+EL+    T  Y+ +VYVLPKHLDEKV           LT L++EQA YI V+  GP+K  HYRY
Sbjct:  311 TTGNKDVITIDHMRKMKDMCIVGNIGHFDNEIQVAALRN---LKWTNVKPQVDLIEFPD-GKRLILLSEGRLLNLGNATGHPSFVMSASFTNQVLGQIELFTR--TDAYKNEVYVLPKHLDEKVARLHLDKLGAKLTVLSEEQAAYIGVTPQGPFKSEHYRY 466
[Close]
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_BRUAB (Adenosylhomocysteinase OS=Brucella abortus GN=ahcY PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 4.213e-41
Identity = 91/162 (56.17%), Postives = 111/162 (68.52%), Query Frame = -3 
Query:  296 TTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 781
            TTGNKD+I +DHM+KMK+  IV NIGHFDNEI V  L     +K   +KPQ D   FP+    +I+L+EGRL+NLG ATGHPSFVMS SFTNQV+ Q+EL+    T  Y+ +VYVLPKHLDEKV           LT L++EQA YI V+  GP+K  HYRY
Sbjct:  311 TTGNKDVITIDHMRKMKDMCIVGNIGHFDNEIQVAALRN---LKWTNVKPQVDLIEFPD-GKRLILLSEGRLLNLGNATGHPSFVMSASFTNQVLGQIELFTR--TDAYKNEVYVLPKHLDEKVARLHLDKLGAKLTVLSEEQAAYIGVTPQGPFKSEHYRY 466
[Close]
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_BRUA2 (Adenosylhomocysteinase OS=Brucella abortus (strain 2308) GN=ahcY PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 4.213e-41
Identity = 91/162 (56.17%), Postives = 111/162 (68.52%), Query Frame = -3 
Query:  296 TTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 781
            TTGNKD+I +DHM+KMK+  IV NIGHFDNEI V  L     +K   +KPQ D   FP+    +I+L+EGRL+NLG ATGHPSFVMS SFTNQV+ Q+EL+    T  Y+ +VYVLPKHLDEKV           LT L++EQA YI V+  GP+K  HYRY
Sbjct:  311 TTGNKDVITIDHMRKMKDMCIVGNIGHFDNEIQVAALRN---LKWTNVKPQVDLIEFPD-GKRLILLSEGRLLNLGNATGHPSFVMSASFTNQVLGQIELFTR--TDAYKNEVYVLPKHLDEKVARLHLDKLGAKLTVLSEEQAAYIGVTPQGPFKSEHYRY 466
[Close]
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_BRUA1 (Adenosylhomocysteinase OS=Brucella abortus (strain S19) GN=ahcY PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 4.213e-41
Identity = 91/162 (56.17%), Postives = 111/162 (68.52%), Query Frame = -3 
Query:  296 TTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 781
            TTGNKD+I +DHM+KMK+  IV NIGHFDNEI V  L     +K   +KPQ D   FP+    +I+L+EGRL+NLG ATGHPSFVMS SFTNQV+ Q+EL+    T  Y+ +VYVLPKHLDEKV           LT L++EQA YI V+  GP+K  HYRY
Sbjct:  311 TTGNKDVITIDHMRKMKDMCIVGNIGHFDNEIQVAALRN---LKWTNVKPQVDLIEFPD-GKRLILLSEGRLLNLGNATGHPSFVMSASFTNQVLGQIELFTR--TDAYKNEVYVLPKHLDEKVARLHLDKLGAKLTVLSEEQAAYIGVTPQGPFKSEHYRY 466
[Close]
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_AGRRK (Adenosylhomocysteinase OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=ahcY PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 4.213e-41
Identity = 92/162 (56.79%), Postives = 112/162 (69.14%), Query Frame = -3 
Query:  296 TTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 781
            TTGNKD+I +DHM+ MK+ AIV NIGHFDNEI V  L     +K   +KPQ D   F + N  II+L+EGRL+NLG ATGHPSFVMS SFTNQ +AQ+EL+ +   G+Y+ +VYVLPKHLDEKV           LT L+ EQA YI V+  GP+K  HYRY
Sbjct:  311 TTGNKDVIRIDHMRAMKDMAIVGNIGHFDNEIQVAALRN---LKWTNVKPQVDLIEFAKGNR-IILLSEGRLLNLGNATGHPSFVMSASFTNQTLAQIELFTK--PGQYQNQVYVLPKHLDEKVARLHLGKLGVKLTELSGEQAAYIGVTPQGPFKSDHYRY 466
[Close]
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_ACISJ (Adenosylhomocysteinase OS=Acidovorax sp. (strain JS42) GN=ahcY PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 4.213e-41
Identity = 94/162 (58.02%), Postives = 108/162 (66.67%), Query Frame = -3 
Query:  296 TTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 781
            TTGN+D+I  +HMK MK+ AIVCNIGHFDNEI V  LE +   + I  KPQ D  +FP+    II+LA+GRL+NLGC TGHPSFVMS SF NQ IAQ+EL+     G    KVYVLPKHLDEKV           LT L+ EQA YI V   GPYKP  YRY
Sbjct:  319 TTGNRDVITFEHMKAMKDQAIVCNIGHFDNEIQVAKLEEHCQWEEI--KPQVDHVIFPD-GKRIILLAKGRLVNLGCGTGHPSFVMSNSFANQTIAQIELFTHPE-GYDVGKVYVLPKHLDEKVARLHLKKVGAMLTELSDEQAAYIGVPKQGPYKPDTYRY 476
[Close]
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_CAEEL (Adenosylhomocysteinase OS=Caenorhabditis elegans GN=ahcy-1 PE=1 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 5.502e-41
Identity = 91/163 (55.83%), Postives = 112/163 (68.71%), Query Frame = -3 
Query:  296 TTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKST-GKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 781
            TTG KDI+   H + + N+AIVCN+GHFD EIDV  L T    K+ TIKPQ DR+   +    +I+LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+ELW +  T  +Y+  +YVLPK LDE+V           LT+L+ EQA Y+ V   GPYKP HYRY
Sbjct:  277 TTGCKDIVTGKHFELLPNDAIVCNVGHFDCEIDVKWLNTN-ATKKDTIKPQVDRYTL-KNGRHVILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQVELWTKFGTPQEYKLGLYVLPKTLDEEVAYLHLAQLGVKLTKLSDEQASYLGVPVAGPYKPDHYRY 437
The following BLAST results are available for this feature:
BLAST of CX043270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 243
Match NameE-valueIdentityDescription
SAHH_BRUO24.213e-4156.17Adenosylhomocysteinase OS=Brucella ovis (strain AT... [more]
SAHH_BRUME4.213e-4156.17Adenosylhomocysteinase OS=Brucella melitensis GN=a... [more]
SAHH_BRUMB4.213e-4156.17Adenosylhomocysteinase OS=Brucella melitensis biot... [more]
SAHH_BRUC24.213e-4156.17Adenosylhomocysteinase OS=Brucella canis (strain A... [more]
SAHH_BRUAB4.213e-4156.17Adenosylhomocysteinase OS=Brucella abortus GN=ahcY... [more]
SAHH_BRUA24.213e-4156.17Adenosylhomocysteinase OS=Brucella abortus (strain... [more]
SAHH_BRUA14.213e-4156.17Adenosylhomocysteinase OS=Brucella abortus (strain... [more]
SAHH_AGRRK4.213e-4156.79Adenosylhomocysteinase OS=Agrobacterium radiobacte... [more]
SAHH_ACISJ4.213e-4158.02Adenosylhomocysteinase OS=Acidovorax sp. (strain J... [more]
SAHH_CAEEL5.502e-4155.83Adenosylhomocysteinase OS=Caenorhabditis elegans G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_10A03_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-10A03-B6-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043270 ID=CX043270; Name=CX043270; organism=Citrus sinensis; type=EST; length=783bp
GTAAACAATAAGGATAACAAGATGCAGCAAAGCAAGCAAAACTTAAAACT
GCATCAAATACAACATAATCCAACACGGCCCCATCCAAAACCTTATTCAA
ATCCCAAATGGTCTTCAATCAACTGAAACAAATCCGTTTCTTTCCTCCAA
CTTTCCCACCACCCAAACACACACTACTACCAAATTTAAACCTAACATCC
TACTACAGATCATCATTGAAAACAATCAAGCCGGCCAAATATTTTGTTTC
TTTCCCTCAAAACATTCACTCTTCTTCTTCTTCTTCTTCCACTTAGTACC
TGTAGTGAAGAGGCTTGTAAGGACCATCGGCGGACACACTGATGTAGTCA
GCCTGCTCCTTGGTGAGCCTGGTGAGCTTAGCTCCAAGTTTGCCAAGGTG
AAGAGCAGCAACCTTCTCATCGAGGTGCTTGGGCAGAACATACACCTTCT
TCTCGTACTTGCCGGTGCTCTTCTCCTTCCAGAGCTCAAGCTGGGCAATC
ACCTGATTGGTGAAGGAACAGGACATCACAAAGCTGGGGTGCCCAGTGGC
ACATCCCAAGTTCATGAGACGTCCCTCAGCCAACACGATGATGCCTGAGT
TGGTCTCGGGGAAGACCCACCTATCAGTTTGGGGCTTGATGGTAATGCGC
TTAACACCCGGGTAGGTCTCAAGACCGAGCACATCAATTTCATTATCAAA
GTGACCAATGTTGCAAACAATTGCATTGTTCTTCATCTTCTTCATGTGGT
CAACCATGATGATGTCCTTGTTACCGGTGGTGG
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