CX043270

Overview
NameCX043270
Unique NameCX043270
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length783
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX043270_ssr270 microsatellite CX043270_ssr270:270..287. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1840 contig Csv1_Contig1840:1097..1879. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_BOVIN (Adenosylhomocysteinase OS=Bos taurus GN=AHCY PE=2 SV=3)

HSP 1 Score: 166.392 bits (420), Expect = 1.601e-40
Identity = 90/162 (55.56%), Postives = 112/162 (69.14%), Query Frame = -3
Query:  296 TTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 781
            TTG  DII+  H ++MK++AIVCNIGHFD EIDV  L     V+++ IKPQ DR++  +    II+LAEGRL+NLGCA GHPSFVMS SFTNQV+AQ+ELW      KY   V+ LPK LDE V           LT+LT++QA Y+ VS +GP+KP HYRY
Sbjct:  275 TTGCTDIILGQHFEQMKDDAIVCNIGHFDVEIDVKWLNEN-AVEKVNIKPQVDRYLL-KNGRRIILLAEGRLVNLGCAMGHPSFVMSNSFTNQVLAQIELWTHPD--KYPVGVHFLPKKLDEAVAEAHLGKLNVKLTKLTEKQAQYLGVSREGPFKPDHYRY 432          
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_SINMW (Adenosylhomocysteinase OS=Sinorhizobium medicae (strain WSM419) GN=ahcY PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.091e-40
Identity = 91/162 (56.17%), Postives = 112/162 (69.14%), Query Frame = -3
Query:  296 TTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 781
            TTGNKD+I ++HM+ MK+ AIV NIGHFDNEI V  L     +K   +KPQ D   FP+ N  II+L+EGRL+NLG ATGHPSFVMS SF+NQV+AQ+EL+ +     Y+ +VYVLPK LDEKV           LT L++EQA YI V A GP+K  HYRY
Sbjct:  311 TTGNKDVIRIEHMRAMKDMAIVGNIGHFDNEIQVSALRN---LKWTNVKPQVDLIEFPKGNR-IILLSEGRLLNLGNATGHPSFVMSASFSNQVLAQIELFTKGE--NYKNEVYVLPKQLDEKVARLHLAKLGAKLTELSEEQAAYIGVKAQGPFKAEHYRY 466          
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_CORDI (Adenosylhomocysteinase OS=Corynebacterium diphtheriae GN=ahcY PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.091e-40
Identity = 89/161 (55.28%), Postives = 109/161 (67.70%), Query Frame = -3
Query:  296 TGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 778
            TGN  II  + M  MK++A++ NIGHFDNEID+  L     V R+TIKPQ D +  P   S I+VL+EGRL+NLG ATGHPSFVMS SF +Q IAQ+EL++  + G+Y  +VY LPK LDEKV           +T LTKEQA+YI V   GPYKP HYRY
Sbjct:  321 TGNMGIISFEQMLAMKDHAVLGNIGHFDNEIDMASLLHRDDVSRVTIKPQVDEFTLPNGKS-IVVLSEGRLLNLGNATGHPSFVMSTSFADQTIAQIELFQ--NDGRYVNEVYRLPKILDEKVARIHVEALGGTITELTKEQAEYIGVDVAGPYKPEHYRY 478          
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_ACIAC (Adenosylhomocysteinase OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.091e-40
Identity = 93/162 (57.41%), Postives = 106/162 (65.43%), Query Frame = -3
Query:  296 TTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 781
            TTGNKD+I  +HM  MKN AIVCNIGHFDNEIDV  +E Y   +   +KPQ D  +FP+    I +LA+GRL+NLGCATGHPSFVMS SF NQ IAQ+EL+  K       KVYVLPK LDEKV           LT LT  QA YI V  +GPYK   YRY
Sbjct:  319 TTGNKDVIRHEHMVAMKNEAIVCNIGHFDNEIDVASIEKY---RWEEVKPQVDHVIFPD-GKRITLLAKGRLVNLGCATGHPSFVMSSSFANQTIAQIELF-TKPDAYQAGKVYVLPKVLDEKVARLHLKKVGAQLTELTDAQAAYIGVKKEGPYKADTYRY 475          
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_RHIME (Adenosylhomocysteinase OS=Rhizobium meliloti GN=ahcY PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.566e-40
Identity = 90/162 (55.56%), Postives = 112/162 (69.14%), Query Frame = -3
Query:  296 TTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 781
            TTGNKD+I ++HM+ MK+ AIV NIGHFDNEI V  L     +K   +KPQ D   FP+ N  II+L+EGRL+NLG ATGHPSFVMS SF+NQV+AQ+EL+ +    +Y+ +VYVLPK LDEKV           LT L++EQA YI V   GP+K  HYRY
Sbjct:  311 TTGNKDVIRIEHMRAMKDMAIVGNIGHFDNEIQVSALRN---LKWTNVKPQVDLIEFPKGNR-IILLSEGRLLNLGNATGHPSFVMSASFSNQVLAQIELFTKGE--QYKNEVYVLPKQLDEKVARLHLAKLGAKLTELSEEQASYIGVKQQGPFKAEHYRY 466          
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_RHOSH (Adenosylhomocysteinase OS=Rhodobacter sphaeroides GN=ahcY PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.038e-39
Identity = 89/162 (54.94%), Postives = 111/162 (68.52%), Query Frame = -3
Query:  296 TTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 781
            TTGN+D+I ++HM++MK+ AIV NIGHFDNEI V  L+ +   K   IK Q D    P + S II+L+EGRL+NLG ATGHPSFVMS SFTNQV+AQ+ELW + +   Y+  VY+LPK LDEKV           LT +  EQADYI V  +GP+K  HYRY
Sbjct:  308 TTGNRDVIRIEHMREMKDMAIVGNIGHFDNEIQVAALKNH---KWTNIKDQVDMIEMP-SGSRIILLSEGRLLNLGNATGHPSFVMSASFTNQVLAQIELWTKGA--DYQPGVYILPKALDEKVARLHLKKIGVKLTDVRPEQADYIGVKVEGPFKAEHYRY 463          
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_RHOCA (Adenosylhomocysteinase OS=Rhodobacter capsulatus GN=ahcY PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.038e-39
Identity = 88/162 (54.32%), Postives = 113/162 (69.75%), Query Frame = -3
Query:  296 TTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 781
            TTGNKD+I ++HM++MK+ AIV NIGHFDNEI V  L+ +   K   IK Q D    P + + II+L+EGRL+NLG ATGHPSFVMS SFTNQV+AQ+ELW + +  +Y+  VY+LPK LDEKV           LT L  +QA+YI V+ +GP+K  HYRY
Sbjct:  308 TTGNKDVIRIEHMREMKDMAIVGNIGHFDNEIQVAALKNH---KWTNIKDQVDMIEMP-SGARIILLSEGRLLNLGNATGHPSFVMSASFTNQVLAQIELWTKGA--EYQPGVYILPKSLDEKVARLHLKKIGVKLTTLRPDQAEYIGVTVEGPFKSDHYRY 463          
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_PIG (Adenosylhomocysteinase OS=Sus scrofa GN=AHCY PE=3 SV=3)

HSP 1 Score: 163.696 bits (413), Expect = 1.038e-39
Identity = 89/162 (54.94%), Postives = 112/162 (69.14%), Query Frame = -3
Query:  296 TTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 781
            TTG  DII+  H ++MK++AIVCNIGHFD EIDV  L     V+++ IKPQ DR++  +    II+LAEGRL+NLGCA GHPSFVMS SFTNQV+AQ+ELW      KY   V+ LPK LDE V           LT+LT++QA Y+ +S +GP+KP HYRY
Sbjct:  275 TTGCIDIILGRHFEQMKDDAIVCNIGHFDVEIDVKWLNEN-AVEKVNIKPQVDRYLL-KNGHRIILLAEGRLVNLGCAMGHPSFVMSNSFTNQVLAQIELWTHPD--KYPVGVHFLPKKLDEAVAEAHLGKLNVKLTKLTEKQAQYLGMSREGPFKPDHYRY 432          
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_MACFA (Adenosylhomocysteinase OS=Macaca fascicularis GN=AHCY PE=2 SV=3)

HSP 1 Score: 163.696 bits (413), Expect = 1.038e-39
Identity = 90/162 (55.56%), Postives = 111/162 (68.52%), Query Frame = -3
Query:  296 TTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 781
            TTG  DII+  H ++MK++AIVCNIGHFD EIDV  L     V+++ IKPQ DR+   +    II+LAEGRL+NLGCA GHPSFVMS SFTNQV+AQ+ELW      KY   V+ LPK LDE V           LT+LT++QA Y+ +S DGP+KP HYRY
Sbjct:  275 TTGCVDIILGRHFEQMKDDAIVCNIGHFDVEIDVKWLNEN-AVEKVNIKPQVDRYRL-KNGRRIILLAEGRLVNLGCAMGHPSFVMSNSFTNQVMAQIELWTHPD--KYPVGVHFLPKKLDEAVAEAHLGKLNVKLTKLTEKQAQYLGMSRDGPFKPDHYRY 432          
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_HUMAN (Adenosylhomocysteinase OS=Homo sapiens GN=AHCY PE=1 SV=4)

HSP 1 Score: 163.696 bits (413), Expect = 1.038e-39
Identity = 90/162 (55.56%), Postives = 111/162 (68.52%), Query Frame = -3
Query:  296 TTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 781
            TTG  DII+  H ++MK++AIVCNIGHFD EIDV  L     V+++ IKPQ DR+   +    II+LAEGRL+NLGCA GHPSFVMS SFTNQV+AQ+ELW      KY   V+ LPK LDE V           LT+LT++QA Y+ +S DGP+KP HYRY
Sbjct:  275 TTGCIDIILGRHFEQMKDDAIVCNIGHFDVEIDVKWLNEN-AVEKVNIKPQVDRYRL-KNGRRIILLAEGRLVNLGCAMGHPSFVMSNSFTNQVMAQIELWTHPD--KYPVGVHFLPKKLDEAVAEAHLGKLNVKLTKLTEKQAQYLGMSCDGPFKPDHYRY 432          
The following BLAST results are available for this feature:
BLAST of CX043270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 243
Match NameE-valueIdentityDescription
SAHH_BOVIN1.601e-4055.56Adenosylhomocysteinase OS=Bos taurus GN=AHCY PE=2 ... [more]
SAHH_SINMW2.091e-4056.17Adenosylhomocysteinase OS=Sinorhizobium medicae (s... [more]
SAHH_CORDI2.091e-4055.28Adenosylhomocysteinase OS=Corynebacterium diphther... [more]
SAHH_ACIAC2.091e-4057.41Adenosylhomocysteinase OS=Acidovorax avenae subsp.... [more]
SAHH_RHIME3.566e-4055.56Adenosylhomocysteinase OS=Rhizobium meliloti GN=ah... [more]
SAHH_RHOSH1.038e-3954.94Adenosylhomocysteinase OS=Rhodobacter sphaeroides ... [more]
SAHH_RHOCA1.038e-3954.32Adenosylhomocysteinase OS=Rhodobacter capsulatus G... [more]
SAHH_PIG1.038e-3954.94Adenosylhomocysteinase OS=Sus scrofa GN=AHCY PE=3 ... [more]
SAHH_MACFA1.038e-3955.56Adenosylhomocysteinase OS=Macaca fascicularis GN=A... [more]
SAHH_HUMAN1.038e-3955.56Adenosylhomocysteinase OS=Homo sapiens GN=AHCY PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_10A03_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-10A03-B6-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043270 ID=CX043270; Name=CX043270; organism=Citrus sinensis; type=EST; length=783bp
GTAAACAATAAGGATAACAAGATGCAGCAAAGCAAGCAAAACTTAAAACT
GCATCAAATACAACATAATCCAACACGGCCCCATCCAAAACCTTATTCAA
ATCCCAAATGGTCTTCAATCAACTGAAACAAATCCGTTTCTTTCCTCCAA
CTTTCCCACCACCCAAACACACACTACTACCAAATTTAAACCTAACATCC
TACTACAGATCATCATTGAAAACAATCAAGCCGGCCAAATATTTTGTTTC
TTTCCCTCAAAACATTCACTCTTCTTCTTCTTCTTCTTCCACTTAGTACC
TGTAGTGAAGAGGCTTGTAAGGACCATCGGCGGACACACTGATGTAGTCA
GCCTGCTCCTTGGTGAGCCTGGTGAGCTTAGCTCCAAGTTTGCCAAGGTG
AAGAGCAGCAACCTTCTCATCGAGGTGCTTGGGCAGAACATACACCTTCT
TCTCGTACTTGCCGGTGCTCTTCTCCTTCCAGAGCTCAAGCTGGGCAATC
ACCTGATTGGTGAAGGAACAGGACATCACAAAGCTGGGGTGCCCAGTGGC
ACATCCCAAGTTCATGAGACGTCCCTCAGCCAACACGATGATGCCTGAGT
TGGTCTCGGGGAAGACCCACCTATCAGTTTGGGGCTTGATGGTAATGCGC
TTAACACCCGGGTAGGTCTCAAGACCGAGCACATCAATTTCATTATCAAA
GTGACCAATGTTGCAAACAATTGCATTGTTCTTCATCTTCTTCATGTGGT
CAACCATGATGATGTCCTTGTTACCGGTGGTGG
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