CX043270

Overview
NameCX043270
Unique NameCX043270
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length783
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX043270_ssr270 microsatellite CX043270_ssr270:270..287. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1840 contig Csv1_Contig1840:1097..1879. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH3_HUMAN (Putative adenosylhomocysteinase 3 OS=Homo sapiens GN=AHCYL2 PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 7.454e-30
Identity = 69/161 (42.86%), Postives = 105/161 (65.22%), Query Frame = -3
Query:  296 TGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 778
            TGNK+++  +H+ +MKN+ IVCN+GH + EIDV  L T P +    ++ Q D  ++P+    I++LAEGRL+NL C+T  P+FV+S + T Q +A +EL+     G+Y++ VY+LPK +DE V           LT LT EQA Y+ ++ +GP+KP +YRY
Sbjct:  455 TGNKNVVTREHLDRMKNSCIVCNMGHSNTEIDVASLRT-PELTWERVRSQVDHVIWPD-GKRIVLLAEGRLLNLSCSTV-PTFVLSITATTQALALIELYNAPE-GRYKQDVYLLPKKMDEYVASLHLPTFDAHLTELTDEQAKYLGLNKNGPFKPNYYRY 611          
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_PSEPF (Adenosylhomocysteinase OS=Pseudomonas fluorescens (strain Pf0-1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.660e-29
Identity = 80/176 (45.45%), Postives = 107/176 (60.80%), Query Frame = -3
Query:  296 TTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGL-------ETYPGVKRITIKPQTDRWVF-PETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEK-----STGKYEK-KVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 781
            TTGN ++   + +K +K  A+VCNIGHFDNEID   +       E  P V +I    +T    F P+ +  +I+LAEGRL+NLG ATGHPS +M  SF NQV+AQ+ L+ +K        K E+  V VLPK LDE+V           +T+LTK+QADYI V+ +GP+KP  YRY
Sbjct:  297 TTGNVNVCDANMLKALKKRAVVCNIGHFDNEIDTAFMRKNWAWEEVKPQVHKIH---RTGAGSFDPQNDDYLILLAEGRLVNLGNATGHPSRIMDGSFANQVLAQIFLFGQKYADLSPAQKAERLTVEVLPKKLDEEVALEMVRGFGGVVTQLTKQQADYIGVTVEGPFKPHAYRY 469          
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_PSEMY (Adenosylhomocysteinase OS=Pseudomonas mendocina (strain ymp) GN=ahcY PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.660e-29
Identity = 81/176 (46.02%), Postives = 106/176 (60.23%), Query Frame = -3
Query:  296 TTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGL-------ETYPGVKRITIKPQTDRWVFPETNSG-IIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTG-KYEKK-----VYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 781
            TTGN ++     +K +K  A+VCNIGHFDNEID   +       E  P V +I    +T    F  TN   +I+LAEGRL+NLG ATGHPS +M  SF NQV+AQ+ L+++K      EKK     V VLPK LDE+V           +T+LTK+QA+YI V+ +GP+KP  YRY
Sbjct:  297 TTGNVNVCDAGMLKALKKRAVVCNIGHFDNEIDTAFMRKNWAWEEVKPQVHKIH---RTGAGQFDPTNDDYLILLAEGRLVNLGNATGHPSRIMDGSFANQVLAQIFLFEQKFADLPAEKKAERLTVEVLPKKLDEEVALEMVKGFGGVVTQLTKQQAEYIGVTVEGPFKPDTYRY 469          
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH2_MOUSE (Putative adenosylhomocysteinase 2 OS=Mus musculus GN=Ahcyl1 PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.169e-29
Identity = 67/161 (41.61%), Postives = 105/161 (65.22%), Query Frame = -3
Query:  296 TGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 778
            TGNK+++  +H+ +MKN+ IVCN+GH + EIDV  L T P +    ++ Q D  ++P+    +++LAEGRL+NL C+T  P+FV+S + T Q +A +EL+     G+Y++ VY+LPK +DE V           LT LT +QA Y+ ++ +GP+KP +YRY
Sbjct:  374 TGNKNVVTREHLDRMKNSCIVCNMGHSNTEIDVTSLRT-PELTWERVRSQVDHVIWPD-GKRVVLLAEGRLLNLSCSTV-PTFVLSITATTQALALIELYNAPE-GRYKQDVYLLPKKMDEYVASLHLPSFDAHLTELTDDQAKYLGLNKNGPFKPNYYRY 530          
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH2_HUMAN (Putative adenosylhomocysteinase 2 OS=Homo sapiens GN=AHCYL1 PE=1 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 2.169e-29
Identity = 67/161 (41.61%), Postives = 105/161 (65.22%), Query Frame = -3
Query:  296 TGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 778
            TGNK+++  +H+ +MKN+ IVCN+GH + EIDV  L T P +    ++ Q D  ++P+    +++LAEGRL+NL C+T  P+FV+S + T Q +A +EL+     G+Y++ VY+LPK +DE V           LT LT +QA Y+ ++ +GP+KP +YRY
Sbjct:  374 TGNKNVVTREHLDRMKNSCIVCNMGHSNTEIDVTSLRT-PELTWERVRSQVDHVIWPD-GKRVVLLAEGRLLNLSCSTV-PTFVLSITATTQALALIELYNAPE-GRYKQDVYLLPKKMDEYVASLHLPSFDAHLTELTDDQAKYLGLNKNGPFKPNYYRY 530          
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_PSEE4 (Adenosylhomocysteinase OS=Pseudomonas entomophila (strain L48) GN=ahcY PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.699e-29
Identity = 77/175 (44.00%), Postives = 108/175 (61.71%), Query Frame = -3
Query:  296 TTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQ------TDRWVF-PETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEK-----STGKYEK-KVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 781
            TTGN ++   + +K +K  A+VCNIGHFDNEID   +  +   + +  KPQ      T    F P+ +  +I+LAEGRL+NLG ATGHPS +M  SF NQV+AQ+ L+++K     +  K E+  V VLPK LDE+V           +T+LT +QA+YI V+ +GP+KP  YRY
Sbjct:  297 TTGNVNVCDANMLKALKKRAVVCNIGHFDNEIDTAFMRKHWAWEEV--KPQVHKIHRTGAGTFDPQNDDYLILLAEGRLVNLGNATGHPSRIMDGSFANQVLAQIFLFEQKFAELPAAKKAERLTVEVLPKKLDEEVALEMVRGFGGVVTQLTPQQAEYIGVTVEGPFKPDAYRY 469          
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_PSESM (Adenosylhomocysteinase OS=Pseudomonas syringae pv. tomato GN=ahcY PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 8.241e-29
Identity = 79/176 (44.89%), Postives = 102/176 (57.95%), Query Frame = -3
Query:  296 TTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGL-------ETYPGVKRITIKPQTDRWVFPETNSG-IIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKK------VYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 781
            TTGN ++   + +K +K  A+VCNIGHFDNEID   +       E  P V +I    +T    F   N   +I+LAEGRL+NLG ATGHPS +M  SF NQV+AQ+ L+ +K       K      V VLPK LDE+V           +T+LTK QADYI V+ +GP+KP  YRY
Sbjct:  297 TTGNVNVCDSNMLKALKKRAVVCNIGHFDNEIDTAFMRKNWAWEEVKPQVHKIH---RTGAGAFDAQNDDYLILLAEGRLVNLGNATGHPSRIMDGSFANQVLAQIFLFDQKYADLAPAKKAERLTVEVLPKKLDEEVALEMVRGFGGVVTKLTKTQADYIGVTVEGPFKPDAYRY 469          
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_PSE14 (Adenosylhomocysteinase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=ahcY PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 8.241e-29
Identity = 79/176 (44.89%), Postives = 103/176 (58.52%), Query Frame = -3
Query:  296 TTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGL-------ETYPGVKRITIKPQTDRWVFPETNSG-IIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKK------VYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 781
            TTGN ++   + +K +K  A+VCNIGHFDNEID   +       E  P V +I    +T    F   N   +I+LAEGRL+NLG ATGHPS +M  SF NQV+AQ+ L+++K       K      V VLPK LDE+V           +T+LTK QADYI V+ +GP+KP  YRY
Sbjct:  297 TTGNVNVCDSNMLKALKKRAVVCNIGHFDNEIDTAFMRKNWAWEEVKPQVHKIH---RTGPGSFDAQNDDYLILLAEGRLVNLGNATGHPSRIMDGSFANQVLAQIFLFEQKYADLAPAKKAERLTVEVLPKKLDEEVALEMVRGFGGVVTKLTKTQADYIGVTVEGPFKPHAYRY 469          
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_PSEU2 (Adenosylhomocysteinase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=ahcY PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.076e-28
Identity = 79/176 (44.89%), Postives = 103/176 (58.52%), Query Frame = -3
Query:  296 TTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGL-------ETYPGVKRITIKPQTDRWVFPETNSG-IIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKK------VYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 781
            TTGN ++   + +K +K  A+VCNIGHFDNEID   +       E  P V +I    +T    F   N   +I+LAEGRL+NLG ATGHPS +M  SF NQV+AQ+ L+++K       K      V VLPK LDE+V           +T+LTK QADYI V+ +GP+KP  YRY
Sbjct:  297 TTGNVNVCDSNMLKALKKRAVVCNIGHFDNEIDTAFMRKNWAWEEVKPQVHKIH---RTGPGSFDAQNDDYLILLAEGRLVNLGNATGHPSRIMDGSFANQVLAQIFLFEQKYADLAPAKKSERLTVEVLPKKLDEEVALEMVRGFGGVVTKLTKTQADYIGVTVEGPFKPDAYRY 469          
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_PSEFS (Adenosylhomocysteinase OS=Pseudomonas fluorescens (strain SBW25) GN=ahcY PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.076e-28
Identity = 79/176 (44.89%), Postives = 104/176 (59.09%), Query Frame = -3
Query:  296 TTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGL-------ETYPGVKRITIKPQTDRWVFPETNSG-IIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEK-----STGKYEK-KVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 781
            TTGN ++   + +K +K  A+VCNIGHFDNEID   +       E  P V ++    +T    F   N   +I+LAEGRL+NLG ATGHPS +M  SF NQV+AQ+ L+ +K        K E+  V VLPK LDE+V           +T+LTK QADYI V+ +GP+KP  YRY
Sbjct:  297 TTGNVNVCDANMLKALKKRAVVCNIGHFDNEIDTAFMRKNWAWEEVKPQVHKVH---RTGAGAFDAQNDDYLILLAEGRLVNLGNATGHPSRIMDGSFANQVLAQIFLFGQKYADLSPAQKAERLTVEVLPKKLDEEVALEMVRGFGGVVTQLTKTQADYIGVTVEGPFKPHAYRY 469          
The following BLAST results are available for this feature:
BLAST of CX043270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 243
Match NameE-valueIdentityDescription
SAHH3_HUMAN7.454e-3042.86Putative adenosylhomocysteinase 3 OS=Homo sapiens ... [more]
SAHH_PSEPF1.660e-2945.45Adenosylhomocysteinase OS=Pseudomonas fluorescens ... [more]
SAHH_PSEMY1.660e-2946.02Adenosylhomocysteinase OS=Pseudomonas mendocina (s... [more]
SAHH2_MOUSE2.169e-2941.61Putative adenosylhomocysteinase 2 OS=Mus musculus ... [more]
SAHH2_HUMAN2.169e-2941.61Putative adenosylhomocysteinase 2 OS=Homo sapiens ... [more]
SAHH_PSEE43.699e-2944.00Adenosylhomocysteinase OS=Pseudomonas entomophila ... [more]
SAHH_PSESM8.241e-2944.89Adenosylhomocysteinase OS=Pseudomonas syringae pv.... [more]
SAHH_PSE148.241e-2944.89Adenosylhomocysteinase OS=Pseudomonas syringae pv.... [more]
SAHH_PSEU21.076e-2844.89Adenosylhomocysteinase OS=Pseudomonas syringae pv.... [more]
SAHH_PSEFS1.076e-2844.89Adenosylhomocysteinase OS=Pseudomonas fluorescens ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_10A03_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-10A03-B6-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043270 ID=CX043270; Name=CX043270; organism=Citrus sinensis; type=EST; length=783bp
GTAAACAATAAGGATAACAAGATGCAGCAAAGCAAGCAAAACTTAAAACT
GCATCAAATACAACATAATCCAACACGGCCCCATCCAAAACCTTATTCAA
ATCCCAAATGGTCTTCAATCAACTGAAACAAATCCGTTTCTTTCCTCCAA
CTTTCCCACCACCCAAACACACACTACTACCAAATTTAAACCTAACATCC
TACTACAGATCATCATTGAAAACAATCAAGCCGGCCAAATATTTTGTTTC
TTTCCCTCAAAACATTCACTCTTCTTCTTCTTCTTCTTCCACTTAGTACC
TGTAGTGAAGAGGCTTGTAAGGACCATCGGCGGACACACTGATGTAGTCA
GCCTGCTCCTTGGTGAGCCTGGTGAGCTTAGCTCCAAGTTTGCCAAGGTG
AAGAGCAGCAACCTTCTCATCGAGGTGCTTGGGCAGAACATACACCTTCT
TCTCGTACTTGCCGGTGCTCTTCTCCTTCCAGAGCTCAAGCTGGGCAATC
ACCTGATTGGTGAAGGAACAGGACATCACAAAGCTGGGGTGCCCAGTGGC
ACATCCCAAGTTCATGAGACGTCCCTCAGCCAACACGATGATGCCTGAGT
TGGTCTCGGGGAAGACCCACCTATCAGTTTGGGGCTTGATGGTAATGCGC
TTAACACCCGGGTAGGTCTCAAGACCGAGCACATCAATTTCATTATCAAA
GTGACCAATGTTGCAAACAATTGCATTGTTCTTCATCTTCTTCATGTGGT
CAACCATGATGATGTCCTTGTTACCGGTGGTGG
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