CX043270

Overview
NameCX043270
Unique NameCX043270
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length783
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX043270_ssr270 microsatellite CX043270_ssr270:270..287. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1840 contig Csv1_Contig1840:1097..1879. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_SYNY3 (Adenosylhomocysteinase OS=Synechocystis sp. (strain PCC 6803) GN=ahcY PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.842e-21
Identity = 63/153 (41.18%), Postives = 87/153 (56.86%), Query Frame = -3
Query:  323 TGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGL-ETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADG 778
            TGNK +I  +H   MK+ AIVCN GHFD EID+  L E    VK +  +  T++++ P   S IIV+ EGRL+NL  A GHPS VM  SF NQ +A   L K K  G+ E  ++ +P  +D+++           +  LT EQ +YI+  A G
Sbjct:  277 TGNKHVIRPEHFAVMKDGAIVCNSGHFDIEIDLKSLKEQAKEVKEV--RNFTEQYILPNGKS-IIVIGEGRLVNLAAAEGHPSAVMDMSFANQALACEHLVKNK--GQLEPGMHSIPVEVDQEIARLKLQAMGIAIDSLTPEQVEYINSWASG 424          
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_SULTO (Adenosylhomocysteinase OS=Sulfolobus tokodaii GN=ahcY PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.842e-21
Identity = 58/146 (39.73%), Postives = 87/146 (59.59%), Query Frame = -3
Query:  341 TGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYI 778
            TGN ++I  +H+ KMK+ AI+ N GHF+ EIDV GL+      R+ I+P  + +  P     I +LAEGRL+NL  A GHPS VM  SF+NQ ++   +++ +  GK E KVY +P+ +DE V           +  +T+EQ +Y+
Sbjct:  267 TGNINVIRKEHILKMKDGAILANSGHFNVEIDVKGLKEMAKSSRL-IRPNLEEYELP-NGKRIYLLAEGRLVNLAAAEGHPSEVMDLSFSNQALSVKYIYENR--GKLENKVYNVPQEIDETVAKLKLNGMGIEIEPMTQEQIEYM 408          
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_ARCFU (Adenosylhomocysteinase OS=Archaeoglobus fulgidus GN=ahcY PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.558e-19
Identity = 61/150 (40.67%), Postives = 83/150 (55.33%), Query Frame = -3
Query:  338 TGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ---LELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYIS 778
            TGN+DII  +H++ MK+ AI+ N GHF+ EID+  LE     KR   K  T+   +   +  + +LAEGRL+NL  A GHP  VM  SF NQ +A     E W+     K E+KVY LP+ LD  V           + +LT+EQ  Y+S
Sbjct:  258 TGNRDIIREEHIRLMKDGAILANAGHFNVEIDIPALERMAKAKREARKYVTE---YDLGDKRVYLLAEGRLVNLVAADGHPVEVMDMSFANQALAAKYIAENWQ-----KLERKVYRLPEELDRMVARMKLESMGVEIDQLTEEQVRYLS 399          
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_CYAP7 (Adenosylhomocysteinase OS=Cyanothece sp. (strain PCC 7424) GN=ahcY PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.035e-19
Identity = 63/155 (40.65%), Postives = 81/155 (52.26%), Query Frame = -3
Query:  323 TGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQ---TDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADG 778
            TGNK +I  +H   MK+ AIVCN GHFD EID+  L    G K   IK     T ++      S I+VL EGRL+NL  A GHPS VM  SF NQ +A   L K K  GK E  +Y +P  +D+++           +  LT EQ  Y++    G
Sbjct:  281 TGNKHVIRPEHFDVMKDGAIVCNSGHFDIEIDLQSL----GEKASEIKEVRNFTQQYTLASGKS-IVVLGEGRLINLAAAEGHPSAVMDMSFANQALACEYLVKNK--GKLEPGIYNIPTEIDQEIARLKLQGMGISIDSLTPEQEAYLNSWTSG 428          
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_SULAC (Adenosylhomocysteinase OS=Sulfolobus acidocaldarius GN=ahcY PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 7.731e-19
Identity = 60/150 (40.00%), Postives = 83/150 (55.33%), Query Frame = -3
Query:  341 TGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPE----TNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYI 778
            TGN +++  DH+ +MK+ A++ N GHF+ EIDV GL      K I+++ +  R    E        I +LA+GRL+NL  A GHPS VM  SF NQ ++   L K K  GK E KVY +P  +DE+V           +  LT EQ +YI
Sbjct:  267 TGNLNVVSRDHILRMKDGAVLANSGHFNVEIDVKGL------KEISVETREVRQNLEEYKLRNGKRIYLLADGRLVNLVAAEGHPSEVMDLSFCNQALSVEHLIKNK--GKLENKVYNVPIEIDEQVARLKLKALGIEIEELTIEQKEYI 408          
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_THEEB (Adenosylhomocysteinase OS=Thermosynechococcus elongatus (strain BP-1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.010e-18
Identity = 56/152 (36.84%), Postives = 83/152 (54.61%), Query Frame = -3
Query:  323 TGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADG 778
            TGNK +I  +H   MK+ A+V N GHFD EID+  L+T     R+ ++  T+ ++ P   S IIVL EGRL+NL  A GHP+ VM  SF NQ +    L K K  G+    ++ +P  +D+++           +  LT EQ +Y++    G
Sbjct:  281 TGNKHVIRAEHFAVMKDGAMVANSGHFDIEIDLATLKTLAKQVRV-VRNFTEEYILPSGKS-IIVLGEGRLINLAAAEGHPASVMDMSFANQALGCEYLVKNK--GQLAAGIHPIPAAVDQEIARLKLQAMGIAIDTLTPEQVEYMNSWTSG 428          
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_PYRAE (Adenosylhomocysteinase OS=Pyrobaculum aerophilum GN=ahcY PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.938e-18
Identity = 59/147 (40.14%), Postives = 77/147 (52.38%), Query Frame = -3
Query:  338 TGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYIS 778
            TGN   I + H+ KMK+ A++ N GHF+ EIDV GLE     KR  I+P  + +  P     + ++ EGRL+NL  A GHPS VM  SF NQ +A   L K     K    VY LP  +D +V           +  LT+EQ  YIS
Sbjct:  291 TGNIRAISLGHIFKMKDGAVLANAGHFNVEIDVAGLERVAVAKR-RIRPYLEEYTLP-NGKRVYLIGEGRLVNLVAAEGHPSEVMDLSFANQALAAEFLAK----NKLSVDVYKLPDEIDREVARLKLKTMGIEIEELTEEQRRYIS 431          
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_AQUAE (Adenosylhomocysteinase OS=Aquifex aeolicus GN=ahcY PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.938e-18
Identity = 58/147 (39.46%), Postives = 81/147 (55.10%), Query Frame = -3
Query:  338 TGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYIS 778
            TGN  +I  +H + MK+ AIV N GHF+ EID+  LE     KR   K  T+  +  +    I +LAEGRL+NL  A GHP+ VM  SF+NQ ++   + K     + EKKVY +P+ +DE V           +  LT+EQ  Y+S
Sbjct:  270 TGNIHVIRREHFEVMKDGAIVANSGHFNVEIDIPALEEMAVEKREIRKEVTEYKL--KDGRRIYLLAEGRLVNLAAAEGHPASVMDMSFSNQALSAEYIVKHHK--ELEKKVYRVPREIDEAVARLKLNALGIKIDELTEEQKKYLS 412          
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_ANASP (Adenosylhomocysteinase OS=Anabaena sp. (strain PCC 7120) GN=ahcY PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.837e-18
Identity = 57/153 (37.25%), Postives = 82/153 (53.59%), Query Frame = -3
Query:  323 TGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRIT-IKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADG 778
            TGNK ++  +H   MK+ AIVCN GHFD E+D+  L      K I  ++P T+ +      S ++VL +GRL+NL  A GHPS VM  SF NQ +A   L K K  GK    ++ +P  +D+++           +  LT EQ +YI+    G
Sbjct:  277 TGNKHVVRGEHFDVMKDGAIVCNSGHFDLELDLKYLAA--NAKEIKEVRPFTEEYKLTNGKS-VVVLGQGRLINLAAAEGHPSAVMDMSFANQALACEYLVKNK--GKLAPGLHSIPVEVDQEIARLKLQAMGIYIDSLTPEQIEYINSWTSG 424          
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_METJA (Adenosylhomocysteinase OS=Methanocaldococcus jannaschii GN=ahcY PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 8.548e-18
Identity = 58/153 (37.91%), Postives = 77/153 (50.33%), Query Frame = -3
Query:  323 TTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADG 781
            TTG KD+I  +H+ KM+N AI+ N GHFDNEI+   LE      +      T+   +   N  I +L EGRL+NL CA GHP  VM  SF NQ +A   + K     K E +VY +P   D  +           +  LTKEQ  Y+    +G
Sbjct:  267 TTGCKDVIRKEHILKMRNGAILANAGHFDNEINKKHLEELAKSIKEVRNCVTE---YDLGNKKIYLLGEGRLVNLACADGHPCEVMDMSFANQALAAEYILKNHE--KLEPRVYNIPYEQDLMIASLKLKAMGIEIDELTKEQKKYLEDWREG 414          
The following BLAST results are available for this feature:
BLAST of CX043270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 243
Match NameE-valueIdentityDescription
SAHH_SYNY34.842e-2141.18Adenosylhomocysteinase OS=Synechocystis sp. (strai... [more]
SAHH_SULTO4.842e-2139.73Adenosylhomocysteinase OS=Sulfolobus tokodaii GN=a... [more]
SAHH_ARCFU1.558e-1940.67Adenosylhomocysteinase OS=Archaeoglobus fulgidus G... [more]
SAHH_CYAP72.035e-1940.65Adenosylhomocysteinase OS=Cyanothece sp. (strain P... [more]
SAHH_SULAC7.731e-1940.00Adenosylhomocysteinase OS=Sulfolobus acidocaldariu... [more]
SAHH_THEEB1.010e-1836.84Adenosylhomocysteinase OS=Thermosynechococcus elon... [more]
SAHH_PYRAE2.938e-1840.14Adenosylhomocysteinase OS=Pyrobaculum aerophilum G... [more]
SAHH_AQUAE2.938e-1839.46Adenosylhomocysteinase OS=Aquifex aeolicus GN=ahcY... [more]
SAHH_ANASP3.837e-1837.25Adenosylhomocysteinase OS=Anabaena sp. (strain PCC... [more]
SAHH_METJA8.548e-1837.91Adenosylhomocysteinase OS=Methanocaldococcus janna... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_10A03_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-10A03-B6-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043270 ID=CX043270; Name=CX043270; organism=Citrus sinensis; type=EST; length=783bp
GTAAACAATAAGGATAACAAGATGCAGCAAAGCAAGCAAAACTTAAAACT
GCATCAAATACAACATAATCCAACACGGCCCCATCCAAAACCTTATTCAA
ATCCCAAATGGTCTTCAATCAACTGAAACAAATCCGTTTCTTTCCTCCAA
CTTTCCCACCACCCAAACACACACTACTACCAAATTTAAACCTAACATCC
TACTACAGATCATCATTGAAAACAATCAAGCCGGCCAAATATTTTGTTTC
TTTCCCTCAAAACATTCACTCTTCTTCTTCTTCTTCTTCCACTTAGTACC
TGTAGTGAAGAGGCTTGTAAGGACCATCGGCGGACACACTGATGTAGTCA
GCCTGCTCCTTGGTGAGCCTGGTGAGCTTAGCTCCAAGTTTGCCAAGGTG
AAGAGCAGCAACCTTCTCATCGAGGTGCTTGGGCAGAACATACACCTTCT
TCTCGTACTTGCCGGTGCTCTTCTCCTTCCAGAGCTCAAGCTGGGCAATC
ACCTGATTGGTGAAGGAACAGGACATCACAAAGCTGGGGTGCCCAGTGGC
ACATCCCAAGTTCATGAGACGTCCCTCAGCCAACACGATGATGCCTGAGT
TGGTCTCGGGGAAGACCCACCTATCAGTTTGGGGCTTGATGGTAATGCGC
TTAACACCCGGGTAGGTCTCAAGACCGAGCACATCAATTTCATTATCAAA
GTGACCAATGTTGCAAACAATTGCATTGTTCTTCATCTTCTTCATGTGGT
CAACCATGATGATGTCCTTGTTACCGGTGGTGG
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