CX043270

Overview
NameCX043270
Unique NameCX043270
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length783
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX043270_ssr270 microsatellite CX043270_ssr270:270..287. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1840 contig Csv1_Contig1840:1097..1879. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_SYNS3 (Adenosylhomocysteinase OS=Synechococcus sp. (strain CC9311) GN=ahcY PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 6.281e-45
Identity = 97/161 (60.25%), Postives = 116/161 (72.05%), Query Frame = -3
Query:  296 TGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 778
            TGN  +I  +H+ KMK+ AIVCNIGHFDNEIDV  L++Y   +   IKPQ D    P  N  II+LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+ + S  +Y K+VYVLPKHLDE V           LT L+K+QADYI+V  +GPYKP HYRY
Sbjct:  322 TGNYQVIRNEHLVKMKDEAIVCNIGHFDNEIDVASLKSY---EWDNIKPQVDHITLPSGNK-IILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELFTKGS--EYGKEVYVLPKHLDEMVARLHLEKIGCKLTELSKDQADYINVPVEGPYKPDHYRY 476          
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_PROM9 (Adenosylhomocysteinase OS=Prochlorococcus marinus (strain MIT 9312) GN=ahcY PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 6.281e-45
Identity = 98/161 (60.87%), Postives = 114/161 (70.81%), Query Frame = -3
Query:  296 TGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 778
            TGN  +I   ++ KMK+ AIVCNIGHFDNEIDV  L+ YP      IKPQ D    P  N  II+LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+ +    KY K+VYVLPKHLDE V           LT+LT+EQADYI+VS +GPYKP  YRY
Sbjct:  318 TGNYQVITNKNLVKMKDEAIVCNIGHFDNEIDVASLKDYPWEN---IKPQVDHITLPSGNK-IILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELFNKSE--KYAKEVYVLPKHLDEMVARLHLDKIGAKLTKLTEEQADYINVSVEGPYKPELYRY 472          
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_COXBU (Adenosylhomocysteinase OS=Coxiella burnetii GN=ahcY PE=3 SV=2)

HSP 1 Score: 181.03 bits (458), Expect = 6.281e-45
Identity = 95/161 (59.01%), Postives = 115/161 (71.43%), Query Frame = -3
Query:  296 TGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 778
            TGN DII  +HM KMK+ AIVCNIGHFDNEID+  L+ Y   + + IKPQ D+ +FP+    + VLA+GRL+NLGCATGHPSFVMS SFTNQV+AQ+ELW+     KY   VYVLPKHLDE+V           LT LT++QADYI V  +GP+K  HYRY
Sbjct:  284 TGNTDIITHEHMLKMKDQAIVCNIGHFDNEIDIASLQDY---QWMNIKPQVDQVIFPD-GKRLTVLAQGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWQYPE--KYPIGVYVLPKHLDEEVARLHLERVGGKLTTLTEKQADYIGVDPEGPFKSEHYRY 438          
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_COXBN (Adenosylhomocysteinase OS=Coxiella burnetii (strain Dugway 5J108-111) GN=ahcY PE=3 SV=2)

HSP 1 Score: 181.03 bits (458), Expect = 6.281e-45
Identity = 95/161 (59.01%), Postives = 115/161 (71.43%), Query Frame = -3
Query:  296 TGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 778
            TGN DII  +HM KMK+ AIVCNIGHFDNEID+  L+ Y   + + IKPQ D+ +FP+    + VLA+GRL+NLGCATGHPSFVMS SFTNQV+AQ+ELW+     KY   VYVLPKHLDE+V           LT LT++QADYI V  +GP+K  HYRY
Sbjct:  284 TGNTDIITHEHMLKMKDQAIVCNIGHFDNEIDIASLQDY---QWMNIKPQVDQVIFPD-GKRLTVLAQGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWQYPE--KYPIGVYVLPKHLDEEVARLHLERVGAKLTTLTEKQADYIGVDPEGPFKSEHYRY 438          
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_COXB2 (Adenosylhomocysteinase OS=Coxiella burnetii (strain CbuG_Q212) GN=ahcY PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 6.281e-45
Identity = 95/161 (59.01%), Postives = 115/161 (71.43%), Query Frame = -3
Query:  296 TGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 778
            TGN DII  +HM KMK+ AIVCNIGHFDNEID+  L+ Y   + + IKPQ D+ +FP+    + VLA+GRL+NLGCATGHPSFVMS SFTNQV+AQ+ELW+     KY   VYVLPKHLDE+V           LT LT++QADYI V  +GP+K  HYRY
Sbjct:  284 TGNTDIITHEHMLKMKDQAIVCNIGHFDNEIDIASLQDY---QWMNIKPQVDQVIFPD-GKRLTVLAQGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWQYPE--KYPIGVYVLPKHLDEEVARLHLERVGGKLTTLTEKQADYIGVDPEGPFKSEHYRY 438          
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_ZYMMO (Adenosylhomocysteinase OS=Zymomonas mobilis GN=ahcY PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 8.203e-45
Identity = 96/161 (59.63%), Postives = 117/161 (72.67%), Query Frame = -3
Query:  296 TGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 778
            TGN DII +DHM+ MK +AIVCNIGHFD+EI +  L     +K   IKPQ D   FP+    IIVLA+GRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+   +T KY+K VY+LPKHLDEKV           L++LT++QADYI V  +GP+KP HYRY
Sbjct:  310 TGNADIITLDHMRAMKQHAIVCNIGHFDSEIQINSLAN---MKWTEIKPQVDLVKFPDGKE-IIVLAKGRLVNLGCATGHPSFVMSASFTNQVLAQIELF--CNTDKYQKDVYMLPKHLDEKVAALHLPKLGVHLSKLTQKQADYIGVPVNGPFKPDHYRY 464          
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_MESSB (Adenosylhomocysteinase OS=Mesorhizobium sp. (strain BNC1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 8.203e-45
Identity = 95/161 (59.01%), Postives = 115/161 (71.43%), Query Frame = -3
Query:  296 TGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 778
            TGNKD++ +DHM+KMK+  I+ NIGHFDNEI V  L  +   K + IKPQ D   FP+    II+L+EGRL+NLG ATGHPSFVMS SFTNQV+AQ+ELW   S  +YE KVYVLPKHLDEKV           LT+L+ EQA YI V+ +GP+KP HYRY
Sbjct:  311 TGNKDVVSLDHMRKMKDMVILGNIGHFDNEIQVAALRNF---KWVNIKPQVDLIEFPD-GKRIILLSEGRLLNLGNATGHPSFVMSASFTNQVLAQIELWTRGS--QYENKVYVLPKHLDEKVARLHLAKLGANLTKLSPEQAAYIGVTPEGPFKPDHYRY 465          
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_RHOPS (Adenosylhomocysteinase OS=Rhodopseudomonas palustris (strain BisB5) GN=ahcY PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.399e-44
Identity = 93/161 (57.76%), Postives = 113/161 (70.19%), Query Frame = -3
Query:  296 TGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 778
            TGNKDII ++HM+ MK+ AIVCNIGHFDNEI +  L+    +K   IKPQ D   FP+    +I+L+EGRL+NLG ATGHPSFVMS SFTNQ +AQ+EL+     GKY+K+VYVLPK LDEKV           LT L K+QADYI V  +GP+K  HYRY
Sbjct:  315 TGNKDIITIEHMRAMKDRAIVCNIGHFDNEIQIAHLKN---LKWDNIKPQVDEITFPD-GKRMILLSEGRLVNLGNATGHPSFVMSASFTNQTLAQIELFANNKDGKYKKEVYVLPKSLDEKVARLHLAKIGVKLTELRKDQADYIGVKVEGPFKADHYRY 471          
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_RALSO (Adenosylhomocysteinase OS=Ralstonia solanacearum GN=ahcY PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.399e-44
Identity = 96/163 (58.90%), Postives = 111/163 (68.10%), Query Frame = -3
Query:  296 TGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKE--KSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 778
            TGN  +I  DHM KMK+ AIVCNIGHFDNEID+  +E Y   +   IKPQ D  +FP+    II+LA+GRL+NLGCATGHPS+VMS SF NQ IAQ+ELW E  K + KY   VY LPKHLDEKV           LT LT +QA YI VS +GPYK  HYRY
Sbjct:  316 TGNYHVITHDHMAKMKDQAIVCNIGHFDNEIDIASVEQYQWEE---IKPQVDHVIFPDGKK-IIILAKGRLVNLGCATGHPSYVMSSSFANQTIAQIELWTEAQKGSSKYPVGVYTLPKHLDEKVARLQLKKLNAQLTVLTDKQAAYIGVSKEGPYKADHYRY 474          
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_NOVAD (Adenosylhomocysteinase OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=ahcY PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.399e-44
Identity = 94/161 (58.39%), Postives = 117/161 (72.67%), Query Frame = -3
Query:  296 TGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 778
            TGN+D+I  +HMK MK  +IVCNIGHFD+EI +  L  Y   K   IKP TD   FP+    II+LA+GRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+ + +  +Y+ +VYVLPKHLDEKV           LT+L+K+QADYI VS +GP+KP HYRY
Sbjct:  314 TGNEDVITAEHMKAMKPMSIVCNIGHFDSEIQISALNNY---KWTEIKPGTDLVEFPDGKQ-IIILAKGRLVNLGCATGHPSFVMSSSFTNQVLAQIELFTKNA--EYKNEVYVLPKHLDEKVAALHLEKLGVKLTKLSKKQADYIGVSQEGPFKPDHYRY 468          
The following BLAST results are available for this feature:
BLAST of CX043270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 243
Match NameE-valueIdentityDescription
SAHH_SYNS36.281e-4560.25Adenosylhomocysteinase OS=Synechococcus sp. (strai... [more]
SAHH_PROM96.281e-4560.87Adenosylhomocysteinase OS=Prochlorococcus marinus ... [more]
SAHH_COXBU6.281e-4559.01Adenosylhomocysteinase OS=Coxiella burnetii GN=ahc... [more]
SAHH_COXBN6.281e-4559.01Adenosylhomocysteinase OS=Coxiella burnetii (strai... [more]
SAHH_COXB26.281e-4559.01Adenosylhomocysteinase OS=Coxiella burnetii (strai... [more]
SAHH_ZYMMO8.203e-4559.63Adenosylhomocysteinase OS=Zymomonas mobilis GN=ahc... [more]
SAHH_MESSB8.203e-4559.01Adenosylhomocysteinase OS=Mesorhizobium sp. (strai... [more]
SAHH_RHOPS1.399e-4457.76Adenosylhomocysteinase OS=Rhodopseudomonas palustr... [more]
SAHH_RALSO1.399e-4458.90Adenosylhomocysteinase OS=Ralstonia solanacearum G... [more]
SAHH_NOVAD1.399e-4458.39Adenosylhomocysteinase OS=Novosphingobium aromatic... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_10A03_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-10A03-B6-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043270 ID=CX043270; Name=CX043270; organism=Citrus sinensis; type=EST; length=783bp
GTAAACAATAAGGATAACAAGATGCAGCAAAGCAAGCAAAACTTAAAACT
GCATCAAATACAACATAATCCAACACGGCCCCATCCAAAACCTTATTCAA
ATCCCAAATGGTCTTCAATCAACTGAAACAAATCCGTTTCTTTCCTCCAA
CTTTCCCACCACCCAAACACACACTACTACCAAATTTAAACCTAACATCC
TACTACAGATCATCATTGAAAACAATCAAGCCGGCCAAATATTTTGTTTC
TTTCCCTCAAAACATTCACTCTTCTTCTTCTTCTTCTTCCACTTAGTACC
TGTAGTGAAGAGGCTTGTAAGGACCATCGGCGGACACACTGATGTAGTCA
GCCTGCTCCTTGGTGAGCCTGGTGAGCTTAGCTCCAAGTTTGCCAAGGTG
AAGAGCAGCAACCTTCTCATCGAGGTGCTTGGGCAGAACATACACCTTCT
TCTCGTACTTGCCGGTGCTCTTCTCCTTCCAGAGCTCAAGCTGGGCAATC
ACCTGATTGGTGAAGGAACAGGACATCACAAAGCTGGGGTGCCCAGTGGC
ACATCCCAAGTTCATGAGACGTCCCTCAGCCAACACGATGATGCCTGAGT
TGGTCTCGGGGAAGACCCACCTATCAGTTTGGGGCTTGATGGTAATGCGC
TTAACACCCGGGTAGGTCTCAAGACCGAGCACATCAATTTCATTATCAAA
GTGACCAATGTTGCAAACAATTGCATTGTTCTTCATCTTCTTCATGTGGT
CAACCATGATGATGTCCTTGTTACCGGTGGTGG
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