CX043270

Overview
NameCX043270
Unique NameCX043270
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length783
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX043270_ssr270 microsatellite CX043270_ssr270:270..287. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1840 contig Csv1_Contig1840:1097..1879. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_GRAFK (Adenosylhomocysteinase OS=Gramella forsetii (strain KT0803) GN=ahcY PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.399e-44
Identity = 91/162 (56.17%), Postives = 114/162 (70.37%), Query Frame = -3
Query:  296 TTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 781
            TTGNKDI+  +H + MK+  IV NIGHFDNEI V  L    G  ++ IKPQ D++        II+LAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+ELW  K+T +Y+ +VY+LPKHLDEKV           LT L ++QA+YI V+ +GPYKP +YRY
Sbjct:  281 TTGNKDIVRPEHFEAMKDKTIVANIGHFDNEIAVSWLNEKHGDSKVEIKPQVDKYTI--NGKDIILLAEGRLVNLGCATGHPSFVMSNSFTNQTLAQIELW--KNTDEYKNEVYMLPKHLDEKVAKLHLERIGVELTELKQDQAEYIGVTVEGPYKPEYYRY 438          
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_SYNPX (Adenosylhomocysteinase OS=Synechococcus sp. (strain WH8102) GN=ahcY PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.827e-44
Identity = 96/161 (59.63%), Postives = 116/161 (72.05%), Query Frame = -3
Query:  296 TGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 778
            TGN  +I  +H++KMK+ AIVCNIGHFDNEIDV  L+ Y   +   IKPQ D    P  N  II+LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+ + +  +Y K+VYVLPKHLDE V           LT L+K+QADYI+V  +GPYKP HYRY
Sbjct:  322 TGNYQVIRNEHLEKMKDEAIVCNIGHFDNEIDVASLKGY---EWDNIKPQVDHITLPSGNR-IILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELFTKGN--EYGKEVYVLPKHLDEMVARLHLDRIGAKLTELSKDQADYINVPVEGPYKPDHYRY 476          
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_STRAZ (Adenosylhomocysteinase OS=Streptomyces atroolivaceus GN=ahcY PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.827e-44
Identity = 95/162 (58.64%), Postives = 110/162 (67.90%), Query Frame = -3
Query:  296 TTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 781
            TTGNKDIIM   M KMK+ AIV NIGHFDNEID+ GL   PG+ +  +KPQ   W FP+    +IVL+EGRL+NLG ATGHPSFVMS SF +Q +AQ+EL+ +    +Y   VYVLPKHLDEKV           LT L  EQA YI V  DGPYKP HYRY
Sbjct:  311 TTGNKDIIMASDMAKMKHQAIVGNIGHFDNEIDMAGLAQIPGIVKDEVKPQVHTWKFPD-GKVLIVLSEGRLLNLGNATGHPSFVMSNSFADQTLAQIELFTKPD--EYPTDVYVLPKHLDEKVARLHLDALGVKLTTLRPEQASYIGVEVDGPYKPDHYRY 469          
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_PROM3 (Adenosylhomocysteinase OS=Prochlorococcus marinus (strain MIT 9303) GN=ahcY PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.827e-44
Identity = 97/162 (59.88%), Postives = 113/162 (69.75%), Query Frame = -3
Query:  296 TTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 781
            +TGN  +I  +H+ +MK+ AIVCNIGHFDNEIDV  L+ Y       IKPQ D    P  N  II+LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+ +    KY  +VYVLPKHLDE V           LT LTK+QADYISV  +GPYKP HYRY
Sbjct:  321 STGNFQVIRHEHLIRMKDEAIVCNIGHFDNEIDVASLKDYSWEN---IKPQVDHITLPSGNK-IILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELFSKGD--KYADQVYVLPKHLDEMVARLHLEKIGARLTELTKQQADYISVPIEGPYKPDHYRY 476          
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_BURP8 (Adenosylhomocysteinase OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=ahcY PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.827e-44
Identity = 97/161 (60.25%), Postives = 111/161 (68.94%), Query Frame = -3
Query:  296 TGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 778
            TGN  +I  DHMK M++NAIVCNIGHFD+EIDV     Y       IKPQ D  +FP+    +I+LAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+EL+ E S  KYE KVYVLPK LDEKV           LT LT EQA YI V  +GP+KP HYRY
Sbjct:  319 TGNYHVIGHDHMKAMRHNAIVCNIGHFDSEIDVASTRQYTWEN---IKPQVDHIIFPD-GKRVILLAEGRLVNLGCATGHPSFVMSNSFTNQTLAQIELFVEGS--KYENKVYVLPKQLDEKVARLHLARIGANLTELTSEQAGYIGVDKNGPFKPNHYRY 473          
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_SYNSC (Adenosylhomocysteinase OS=Synechococcus sp. (strain CC9605) GN=ahcY PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 3.117e-44
Identity = 96/161 (59.63%), Postives = 113/161 (70.19%), Query Frame = -3
Query:  296 TGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 778
            TGN  +I  +H+ KMK+ AIVCNIGHFDNEIDV  L+ Y       IKPQ D    P  N  II+LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+ +    +Y K+VYVLPKHLDE V           LT L+K+QADYI+V  +GPYKP HYRY
Sbjct:  322 TGNYQVIRNEHLVKMKDEAIVCNIGHFDNEIDVASLKEYEWEN---IKPQVDHITLPSGNR-IILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELFTKGD--EYAKEVYVLPKHLDEMVARLHLGRIGANLTELSKDQADYINVPVEGPYKPDHYRY 476          
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_PLAF7 (Adenosylhomocysteinase OS=Plasmodium falciparum (isolate 3D7) GN=PFE1050w PE=1 SV=2)

HSP 1 Score: 178.718 bits (452), Expect = 3.117e-44
Identity = 90/161 (55.90%), Postives = 107/161 (66.46%), Query Frame = -3
Query:  296 TGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 778
            TGN D+I ++H+ KMKNNA+V NIGHFD+EI V  L  Y G+    +KPQ DR   P  N  IIVLA GRL+NLGCATGHP+FVMS SF NQ  AQL+LW+ K T KYE KVY+LPKHLDEKV           LT L   Q  ++ V+  GP+K   YRY
Sbjct:  320 TGNVDVIKLEHLLKMKNNAVVGNIGHFDDEIQVNELFNYKGIHIENVKPQVDRITLPNGNK-IIVLARGRLLNLGCATGHPAFVMSFSFCNQTFAQLDLWQNKDTNKYENKVYLLPKHLDEKVALYHLKKLNASLTELDDNQCQFLGVNKSGPFKSNEYRY 479          
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_NITEC (Adenosylhomocysteinase OS=Nitrosomonas eutropha (strain C91) GN=ahcY PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 3.117e-44
Identity = 97/162 (59.88%), Postives = 113/162 (69.75%), Query Frame = -3
Query:  296 TGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGK-YEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 778
            TGN  +I  DHM KMKN AIVCNIGHFD+EID+  ++ Y       IKPQ D  +FP T   IIVLA+GRL+NLGCATGHPSFVMS SFTNQV+AQ+ELW+    GK Y+KKVYVLPK LDE V           LT LT EQA Y+++  +GPYKP  YRY
Sbjct:  324 TGNLRVITHDHMLKMKNQAIVCNIGHFDSEIDIASVQKYQWEN---IKPQVDHVIFP-TGRRIIVLAQGRLVNLGCATGHPSFVMSSSFTNQVLAQMELWQ---NGKDYQKKVYVLPKQLDEMVARLHLGKLGVKLTELTDEQAHYLNLDKNGPYKPEMYRY 478          
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_MYXXD (Adenosylhomocysteinase OS=Myxococcus xanthus (strain DK 1622) GN=ahcY PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 3.117e-44
Identity = 98/162 (60.49%), Postives = 112/162 (69.14%), Query Frame = -3
Query:  296 TGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYE-KKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 778
            TGNK +I  DHM KMK+ AIVCNIGHFDNEI+V  LE Y   K   IKPQ D  +FP+ N  II+LA+GRL+NLGC TGHPS+VMS SF NQ IAQ+EL+    +  YE  KVYVLPKHLDEKV           LT L++EQADYI V   GPYKP  YRY
Sbjct:  321 TGNKGVITHDHMAKMKDQAIVCNIGHFDNEIEVASLEKY---KWEEIKPQVDHIIFPD-NKRIILLAKGRLVNLGCGTGHPSYVMSSSFANQTIAQIELYSH--SANYEVGKVYVLPKHLDEKVARLQLKKLNAQLTELSQEQADYIGVKTSGPYKPDTYRY 476          
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_METS4 (Adenosylhomocysteinase OS=Methylobacterium sp. (strain 4-46) GN=ahcY PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 3.117e-44
Identity = 95/161 (59.01%), Postives = 112/161 (69.57%), Query Frame = -3
Query:  296 TGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 778
            TGNKD+I +DHM+ MK+ AIVCNIGHFDNEI V GL+    +K   IKPQ D   FP+ +  II+L+EGRL+NLG A GHPSFVMS SFTNQ +AQ+ELW  +  GKYE +VY LPK LDEKV           LT L  +QA YI V A GP+KP HYRY
Sbjct:  314 TGNKDVITIDHMRSMKDRAIVCNIGHFDNEIQVAGLK---NLKWSNIKPQVDEIEFPDGHR-IILLSEGRLVNLGNAMGHPSFVMSASFTNQTLAQIELWTNQ--GKYENQVYTLPKTLDEKVAALHLEKIGVKLTTLRPDQAAYIGVQASGPFKPDHYRY 468          
The following BLAST results are available for this feature:
BLAST of CX043270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 243
Match NameE-valueIdentityDescription
SAHH_GRAFK1.399e-4456.17Adenosylhomocysteinase OS=Gramella forsetii (strai... [more]
SAHH_SYNPX1.827e-4459.63Adenosylhomocysteinase OS=Synechococcus sp. (strai... [more]
SAHH_STRAZ1.827e-4458.64Adenosylhomocysteinase OS=Streptomyces atroolivace... [more]
SAHH_PROM31.827e-4459.88Adenosylhomocysteinase OS=Prochlorococcus marinus ... [more]
SAHH_BURP81.827e-4460.25Adenosylhomocysteinase OS=Burkholderia phymatum (s... [more]
SAHH_SYNSC3.117e-4459.63Adenosylhomocysteinase OS=Synechococcus sp. (strai... [more]
SAHH_PLAF73.117e-4455.90Adenosylhomocysteinase OS=Plasmodium falciparum (i... [more]
SAHH_NITEC3.117e-4459.88Adenosylhomocysteinase OS=Nitrosomonas eutropha (s... [more]
SAHH_MYXXD3.117e-4460.49Adenosylhomocysteinase OS=Myxococcus xanthus (stra... [more]
SAHH_METS43.117e-4459.01Adenosylhomocysteinase OS=Methylobacterium sp. (st... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_10A03_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-10A03-B6-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043270 ID=CX043270; Name=CX043270; organism=Citrus sinensis; type=EST; length=783bp
GTAAACAATAAGGATAACAAGATGCAGCAAAGCAAGCAAAACTTAAAACT
GCATCAAATACAACATAATCCAACACGGCCCCATCCAAAACCTTATTCAA
ATCCCAAATGGTCTTCAATCAACTGAAACAAATCCGTTTCTTTCCTCCAA
CTTTCCCACCACCCAAACACACACTACTACCAAATTTAAACCTAACATCC
TACTACAGATCATCATTGAAAACAATCAAGCCGGCCAAATATTTTGTTTC
TTTCCCTCAAAACATTCACTCTTCTTCTTCTTCTTCTTCCACTTAGTACC
TGTAGTGAAGAGGCTTGTAAGGACCATCGGCGGACACACTGATGTAGTCA
GCCTGCTCCTTGGTGAGCCTGGTGAGCTTAGCTCCAAGTTTGCCAAGGTG
AAGAGCAGCAACCTTCTCATCGAGGTGCTTGGGCAGAACATACACCTTCT
TCTCGTACTTGCCGGTGCTCTTCTCCTTCCAGAGCTCAAGCTGGGCAATC
ACCTGATTGGTGAAGGAACAGGACATCACAAAGCTGGGGTGCCCAGTGGC
ACATCCCAAGTTCATGAGACGTCCCTCAGCCAACACGATGATGCCTGAGT
TGGTCTCGGGGAAGACCCACCTATCAGTTTGGGGCTTGATGGTAATGCGC
TTAACACCCGGGTAGGTCTCAAGACCGAGCACATCAATTTCATTATCAAA
GTGACCAATGTTGCAAACAATTGCATTGTTCTTCATCTTCTTCATGTGGT
CAACCATGATGATGTCCTTGTTACCGGTGGTGG
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