CX043270

Overview
NameCX043270
Unique NameCX043270
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length783
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX043270_ssr270 microsatellite CX043270_ssr270:270..287. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1840 contig Csv1_Contig1840:1097..1879. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_FLAPJ (Adenosylhomocysteinase OS=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) GN=ahcY PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 3.117e-44
Identity = 90/162 (55.56%), Postives = 110/162 (67.90%), Query Frame = -3
Query:  296 TTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 781
            TTGNKDI++  H ++MK+  IVCNIGHFDNEID+  L    G  +I IKPQ D++        I++LAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+ELW  K++  Y   VY+LPKHLDEKV           L  L  +QA YI V  DGP+KP +YRY
Sbjct:  281 TTGNKDIVLGSHFEQMKDKTIVCNIGHFDNEIDMAWLNKNHGASKIEIKPQVDKYTI--AGKDILILAEGRLVNLGCATGHPSFVMSNSFTNQTLAQIELW--KNSAAYNNDVYMLPKHLDEKVAFLHLAKLGVELEVLRDDQAAYIGVGVDGPFKPEYYRY 438          
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_DESVV (Adenosylhomocysteinase OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=ahcY PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 3.117e-44
Identity = 95/161 (59.01%), Postives = 112/161 (69.57%), Query Frame = -3
Query:  296 TGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 778
            TGN ++I   HM+ MK+ AIVCNIGHFDNEID+  LE   G   + IKPQ D+W      S IIVLAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+EL    +    E+KVY LPK LDE+V           LTRL+K+QADYI VS +GP+KP HYRY
Sbjct:  323 TGNCNVITGAHMEAMKDEAIVCNIGHFDNEIDMHYLENTEGCVCLNIKPQVDKWTLRSGRS-IIVLAEGRLVNLGCATGHPSFVMSASFTNQTLAQIEL---ATNPDLERKVYTLPKKLDEEVARLHLDRLGVKLTRLSKDQADYIGVSPEGPFKPDHYRY 479          
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_DESVH (Adenosylhomocysteinase OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=ahcY PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 3.117e-44
Identity = 95/161 (59.01%), Postives = 112/161 (69.57%), Query Frame = -3
Query:  296 TGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 778
            TGN ++I   HM+ MK+ AIVCNIGHFDNEID+  LE   G   + IKPQ D+W      S IIVLAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+EL    +    E+KVY LPK LDE+V           LTRL+K+QADYI VS +GP+KP HYRY
Sbjct:  323 TGNCNVITGAHMEAMKDEAIVCNIGHFDNEIDMHYLENTEGCVCLNIKPQVDKWTLRSGRS-IIVLAEGRLVNLGCATGHPSFVMSASFTNQTLAQIEL---ATNPDLERKVYTLPKKLDEEVARLHLDRLGVKLTRLSKDQADYIGVSPEGPFKPDHYRY 479          
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_PROM0 (Adenosylhomocysteinase OS=Prochlorococcus marinus (strain MIT 9301) GN=ahcY PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 4.071e-44
Identity = 97/161 (60.25%), Postives = 113/161 (70.19%), Query Frame = -3
Query:  296 TGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 778
            TGN  +I  +++ KMK+ AIVCNIGHFDNEIDV  L+ Y       IKPQ D    P  N  II+LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+ +    +Y K+VYVLPKHLDE V           LT+LTKEQADYISVS +GPYK   YRY
Sbjct:  318 TGNYQVITHENLVKMKDEAIVCNIGHFDNEIDVASLKNYQWEN---IKPQVDHITLPSGNK-IILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELFNKSE--QYAKEVYVLPKHLDEMVARLHLDKIGAKLTKLTKEQADYISVSVEGPYKSEFYRY 472          
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_DESAD (Adenosylhomocysteinase OS=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) GN=ahcY PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 5.317e-44
Identity = 93/161 (57.76%), Postives = 113/161 (70.19%), Query Frame = -3
Query:  296 TGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 778
            TGN  +I  +H+ KMK+ AI+CNIGHFDNEI++  LE     K+I IKPQ D+WV  E+   +IVLAEGRL+NLGCATGHPSFVMS SFTNQ +AQ++L K     +YE KV +L K LDE+V           L  L+KEQADYISV  +GPYKP HYRY
Sbjct:  317 TGNYHVITGEHISKMKDEAIICNIGHFDNEIEMGYLENSKTAKKIEIKPQVDKWVM-ESGKSVIVLAEGRLVNLGCATGHPSFVMSNSFTNQALAQIDLAK----NEYEPKVMILSKKLDEEVARLHLERLGVELDVLSKEQADYISVDVEGPYKPDHYRY 472          
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_RHOPT (Adenosylhomocysteinase OS=Rhodopseudomonas palustris (strain TIE-1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 6.944e-44
Identity = 95/161 (59.01%), Postives = 114/161 (70.81%), Query Frame = -3
Query:  296 TGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 778
            TGNKDII ++HM+ MK+ AIVCNIGHFDNEI V  L+    +K   IKPQ D   FP+    +I+L+EGRL+NLG A GHPSFVMS SFTNQ +AQ+EL++ +  GKYEKKVYVLPK LDEKV           LT L K+QADYI V  +GP+K  HYRY
Sbjct:  315 TGNKDIITIEHMRAMKDRAIVCNIGHFDNEIQVATLKN---MKWDNIKPQVDEITFPD-GKRMILLSEGRLVNLGNAMGHPSFVMSASFTNQTLAQIELFQNQ--GKYEKKVYVLPKSLDEKVARLHLAKIGVKLTELRKDQADYIGVKVEGPFKADHYRY 469          
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_RHOP2 (Adenosylhomocysteinase OS=Rhodopseudomonas palustris (strain HaA2) GN=ahcY PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 6.944e-44
Identity = 92/161 (57.14%), Postives = 112/161 (69.57%), Query Frame = -3
Query:  296 TGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 778
            TGNKDII ++HM+ MK+ AIVCNIGHFDNEI +  L+    +K   IKPQ D   FP+    +I+L+EGRL+NLG A GHPSFVMS SFTNQ +AQ+EL+     GKY+K+VYVLPK LDEKV           LT L K+QADYI V  +GP+K  HYRY
Sbjct:  315 TGNKDIITIEHMRAMKDRAIVCNIGHFDNEIQIAHLKN---LKWDNIKPQVDEITFPD-GKRMILLSEGRLVNLGNAMGHPSFVMSASFTNQTLAQIELFANNKDGKYKKEVYVLPKSLDEKVARLHLAKIGVKLTELRKDQADYIGVKVEGPFKADHYRY 471          
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_RHIE6 (Adenosylhomocysteinase OS=Rhizobium etli (strain CIAT 652) GN=ahcY PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 6.944e-44
Identity = 95/162 (58.64%), Postives = 117/162 (72.22%), Query Frame = -3
Query:  296 TTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 781
            TTGNKD+I +DHM++MK+ AIV NIGHFDNEI+V  L     +K   +KPQ D   FP+ N  II+L+EGRL+NLG ATGHPSFVMS SFTNQ +AQ+EL+ +   G+YE KVY+LPKHLDEKV           LT+L++EQA YI VS  GP+K  HYRY
Sbjct:  311 TTGNKDVIRIDHMREMKDMAIVGNIGHFDNEIEVAALRN---LKWTNVKPQVDLIEFPKGNR-IILLSEGRLLNLGNATGHPSFVMSASFTNQTLAQIELFTKP--GQYENKVYILPKHLDEKVARLHLDKLGVKLTQLSEEQAAYIGVSPKGPFKSDHYRY 466          
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_BURXL (Adenosylhomocysteinase OS=Burkholderia xenovorans (strain LB400) GN=ahcY PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 6.944e-44
Identity = 95/161 (59.01%), Postives = 113/161 (70.19%), Query Frame = -3
Query:  296 TGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 778
            TGN  +I  DHMK M++NAIVCNIGHFD+EIDV     Y   +   IKPQ D  +FP+    +I+LAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+EL+ + +  KYE KVYVLPKHLDEKV           LT L+ EQA YI V  +GP+KP HYRY
Sbjct:  319 TGNYHVIGHDHMKAMRHNAIVCNIGHFDSEIDVASTRQY---QWDNIKPQVDHIIFPD-GKRVILLAEGRLVNLGCATGHPSFVMSNSFTNQTLAQIELFTQGN--KYENKVYVLPKHLDEKVARLHLARIGANLTVLSDEQAGYIGVDKNGPFKPNHYRY 473          
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_SYNPW (Adenosylhomocysteinase OS=Synechococcus sp. (strain WH7803) GN=ahcY PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 9.069e-44
Identity = 95/161 (59.01%), Postives = 114/161 (70.81%), Query Frame = -3
Query:  296 TGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 778
            TGN  +I  +H+ KMK+ AIVCNIGHFDNEIDV  L+ Y       IKPQ D    P  N  II+LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+ + +  +Y K+VYVLPKHLDE V           LT L+K+QADYI+V  +GP+KP HYRY
Sbjct:  322 TGNYQVIRNEHLLKMKDEAIVCNIGHFDNEIDVASLKDYEWEN---IKPQVDHITLPSGNR-IILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELFTKGN--EYGKEVYVLPKHLDEMVARLHLDRIGAKLTELSKDQADYINVPVEGPFKPDHYRY 476          
The following BLAST results are available for this feature:
BLAST of CX043270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 243
Match NameE-valueIdentityDescription
SAHH_FLAPJ3.117e-4455.56Adenosylhomocysteinase OS=Flavobacterium psychroph... [more]
SAHH_DESVV3.117e-4459.01Adenosylhomocysteinase OS=Desulfovibrio vulgaris s... [more]
SAHH_DESVH3.117e-4459.01Adenosylhomocysteinase OS=Desulfovibrio vulgaris (... [more]
SAHH_PROM04.071e-4460.25Adenosylhomocysteinase OS=Prochlorococcus marinus ... [more]
SAHH_DESAD5.317e-4457.76Adenosylhomocysteinase OS=Desulfovibrio salexigens... [more]
SAHH_RHOPT6.944e-4459.01Adenosylhomocysteinase OS=Rhodopseudomonas palustr... [more]
SAHH_RHOP26.944e-4457.14Adenosylhomocysteinase OS=Rhodopseudomonas palustr... [more]
SAHH_RHIE66.944e-4458.64Adenosylhomocysteinase OS=Rhizobium etli (strain C... [more]
SAHH_BURXL6.944e-4459.01Adenosylhomocysteinase OS=Burkholderia xenovorans ... [more]
SAHH_SYNPW9.069e-4459.01Adenosylhomocysteinase OS=Synechococcus sp. (strai... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_10A03_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-10A03-B6-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043270 ID=CX043270; Name=CX043270; organism=Citrus sinensis; type=EST; length=783bp
GTAAACAATAAGGATAACAAGATGCAGCAAAGCAAGCAAAACTTAAAACT
GCATCAAATACAACATAATCCAACACGGCCCCATCCAAAACCTTATTCAA
ATCCCAAATGGTCTTCAATCAACTGAAACAAATCCGTTTCTTTCCTCCAA
CTTTCCCACCACCCAAACACACACTACTACCAAATTTAAACCTAACATCC
TACTACAGATCATCATTGAAAACAATCAAGCCGGCCAAATATTTTGTTTC
TTTCCCTCAAAACATTCACTCTTCTTCTTCTTCTTCTTCCACTTAGTACC
TGTAGTGAAGAGGCTTGTAAGGACCATCGGCGGACACACTGATGTAGTCA
GCCTGCTCCTTGGTGAGCCTGGTGAGCTTAGCTCCAAGTTTGCCAAGGTG
AAGAGCAGCAACCTTCTCATCGAGGTGCTTGGGCAGAACATACACCTTCT
TCTCGTACTTGCCGGTGCTCTTCTCCTTCCAGAGCTCAAGCTGGGCAATC
ACCTGATTGGTGAAGGAACAGGACATCACAAAGCTGGGGTGCCCAGTGGC
ACATCCCAAGTTCATGAGACGTCCCTCAGCCAACACGATGATGCCTGAGT
TGGTCTCGGGGAAGACCCACCTATCAGTTTGGGGCTTGATGGTAATGCGC
TTAACACCCGGGTAGGTCTCAAGACCGAGCACATCAATTTCATTATCAAA
GTGACCAATGTTGCAAACAATTGCATTGTTCTTCATCTTCTTCATGTGGT
CAACCATGATGATGTCCTTGTTACCGGTGGTGG
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