EY665385
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665385 vs. ExPASy Swiss-Prot
Match: CB24_TOBAC (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 5.109e-17 Identity = 47/97 (48.45%), Postives = 57/97 (58.76%), Query Frame = 3 Query: 318 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLNKKPDDFSKYQAYELISAKWAMLGAAGFSIPETFNKFGATCGPEAVWFKNWEALLSEG 608 WYGPDR +L E P YLTGE PGDYG+D GL+ P+ F+K + E+I +WAMLGA G PE + G G EAVWFK + SEG Sbjct: 51 WYGPDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEG 143
BLAST of EY665385 vs. ExPASy Swiss-Prot
Match: CB22_TOBAC (Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 5.109e-17 Identity = 47/97 (48.45%), Postives = 57/97 (58.76%), Query Frame = 3 Query: 318 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLNKKPDDFSKYQAYELISAKWAMLGAAGFSIPETFNKFGATCGPEAVWFKNWEALLSEG 608 WYGPDR +L E P YLTGE PGDYG+D GL+ P+ F+K + E+I +WAMLGA G PE + G G EAVWFK + SEG Sbjct: 49 WYGPDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEG 141
BLAST of EY665385 vs. ExPASy Swiss-Prot
Match: CB22_ORYSJ (Chlorophyll a-b binding protein 2, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB2R PE=2 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 5.109e-17 Identity = 48/97 (49.48%), Postives = 60/97 (61.86%), Query Frame = 3 Query: 318 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLNKKPDDFSKYQAYELISAKWAMLGAAGFSIPETFNKFGATCGPEAVWFKNWEALLSEG 608 WYG DR ++L G L E P YLTGE PGDYG+D GL+ P+ F+K + E+I ++WAMLGA G PE + G G EAVWFK + SEG Sbjct: 45 WYGADRVLYL--GPLS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEG 137
BLAST of EY665385 vs. ExPASy Swiss-Prot
Match: CB21_TOBAC (Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 5.109e-17 Identity = 47/97 (48.45%), Postives = 57/97 (58.76%), Query Frame = 3 Query: 318 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLNKKPDDFSKYQAYELISAKWAMLGAAGFSIPETFNKFGATCGPEAVWFKNWEALLSEG 608 WYGPDR +L E P YLTGE PGDYG+D GL+ P+ F+K + E+I +WAMLGA G PE + G G EAVWFK + SEG Sbjct: 50 WYGPDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEG 142
BLAST of EY665385 vs. ExPASy Swiss-Prot
Match: CB21_ORYSJ (Chlorophyll a-b binding protein 1, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB1R PE=2 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 5.109e-17 Identity = 48/97 (49.48%), Postives = 60/97 (61.86%), Query Frame = 3 Query: 318 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLNKKPDDFSKYQAYELISAKWAMLGAAGFSIPETFNKFGATCGPEAVWFKNWEALLSEG 608 WYG DR ++L G L E P YLTGE PGDYG+D GL+ P+ F+K + E+I ++WAMLGA G PE + G G EAVWFK + SEG Sbjct: 49 WYGADRVLYL--GPLS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEG 141
BLAST of EY665385 vs. ExPASy Swiss-Prot
Match: CB21_LEMGI (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Lemna gibba PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 5.109e-17 Identity = 47/97 (48.45%), Postives = 58/97 (59.79%), Query Frame = 3 Query: 318 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLNKKPDDFSKYQAYELISAKWAMLGAAGFSIPETFNKFGATCGPEAVWFKNWEALLSEG 608 WYG DR FL + P YLTGE PGDYG+D GL+ P+ F+K + E+I ++WAMLGA G PE +K G G EAVWFK + SEG Sbjct: 48 WYGADRPKFLGPF---SEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSKNGVQFG-EAVWFKAGAQIFSEG 140
BLAST of EY665385 vs. ExPASy Swiss-Prot
Match: CB23_PETSP (Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp. GN=CAB22R PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 6.673e-17 Identity = 47/97 (48.45%), Postives = 57/97 (58.76%), Query Frame = 3 Query: 318 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLNKKPDDFSKYQAYELISAKWAMLGAAGFSIPETFNKFGATCGPEAVWFKNWEALLSEG 608 WYGPDR +L E P YLTGE P DYG+D GL+ P+ F+K + E+I +WAMLGA G PE F + G G EAVWFK + SEG Sbjct: 51 WYGPDRVKYLGPF---SGEAPSYLTGEFPSDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGIKFG-EAVWFKAGAQIFSEG 143
BLAST of EY665385 vs. ExPASy Swiss-Prot
Match: CB21_SILPR (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Silene pratensis PE=2 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 8.715e-17 Identity = 46/97 (47.42%), Postives = 56/97 (57.73%), Query Frame = 3 Query: 318 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLNKKPDDFSKYQAYELISAKWAMLGAAGFSIPETFNKFGATCGPEAVWFKNWEALLSEG 608 WYGPDR +L + P YLTGE PGDYG+D GL+ P+ F+K + E+I +WAMLGA G PE K G G EAVWFK + EG Sbjct: 48 WYGPDRPKYLGPF---SEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGVKFG-EAVWFKAGSQIFQEG 140
BLAST of EY665385 vs. ExPASy Swiss-Prot
Match: CB21_PETSP (Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp. GN=CAB13 PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.941e-16 Identity = 46/97 (47.42%), Postives = 55/97 (56.70%), Query Frame = 3 Query: 318 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLNKKPDDFSKYQAYELISAKWAMLGAAGFSIPETFNKFGATCGPEAVWFKNWEALLSEG 608 WYGPDR +L E P YLTGE PGDYG+D GL+ P F+K + E+I +W MLGA G PE F + G G EAVWFK + EG Sbjct: 50 WYGPDRVKYLGPF---SGEAPSYLTGEFPGDYGWDTAGLSADPATFAKNRKLEVIHCRWTMLGALGCVFPELFARNGVKFG-EAVWFKAGSQIFKEG 142
BLAST of EY665385 vs. ExPASy Swiss-Prot
Match: CB24_SOLLC (Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 2.536e-16 Identity = 45/97 (46.39%), Postives = 57/97 (58.76%), Query Frame = 3 Query: 318 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLNKKPDDFSKYQAYELISAKWAMLGAAGFSIPETFNKFGATCGPEAVWFKNWEALLSEG 608 WYG DR +L + P YLTGE PGDYG+D GL+ P+ F++ + E+I +WAMLGA G PE +K G G EAVWFK + SEG Sbjct: 49 WYGEDRPKYLGPF---SEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFG-EAVWFKAGSQIFSEG 141 The following BLAST results are available for this feature:
BLAST of EY665385 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665385 ID=EY665385; Name=EY665385; organism=Citrus sinensis; type=EST; length=1051bpback to top |