EY665385
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665385 vs. ExPASy Swiss-Prot
Match: CB2_PHYPA (Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella patens PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.258e-15 Identity = 46/97 (47.42%), Postives = 55/97 (56.70%), Query Frame = 3 Query: 318 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLNKKPDDFSKYQAYELISAKWAMLGAAGFSIPETFNKFGATCGPEAVWFKNWEALLSEG 608 WYG DR FL E P YL GE GDYG+D GL+ P+ F++ + E+I A+WAMLGA G PE K G G EAVWFK + SEG Sbjct: 52 WYGADRPKFLGPF---SGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFG-EAVWFKAGAQIFSEG 144
BLAST of EY665385 vs. ExPASy Swiss-Prot
Match: CB21_SINAL (Chlorophyll a-b binding protein 1, chloroplastic OS=Sinapis alba GN=CAB1 PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.258e-15 Identity = 45/97 (46.39%), Postives = 56/97 (57.73%), Query Frame = 3 Query: 318 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLNKKPDDFSKYQAYELISAKWAMLGAAGFSIPETFNKFGATCGPEAVWFKNWEALLSEG 608 WYG DR +L E P YLTGE PGDYG+D GL+ P+ F++ + E+I +WAMLGA G PE + G G EAVWFK + SEG Sbjct: 49 WYGSDRVKYLGPF---SGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEG 141
BLAST of EY665385 vs. ExPASy Swiss-Prot
Match: CB22_ARATH (Chlorophyll a-b binding protein 2, chloroplastic OS=Arabidopsis thaliana GN=CAB2A PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.644e-15 Identity = 44/97 (45.36%), Postives = 57/97 (58.76%), Query Frame = 3 Query: 318 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLNKKPDDFSKYQAYELISAKWAMLGAAGFSIPETFNKFGATCGPEAVWFKNWEALLSEG 608 WYG DR +L E P YLTGE PGDYG+D GL+ P+ F++ + E+I ++WAMLGA G PE + G G EAVWFK + S+G Sbjct: 50 WYGSDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSDG 142
BLAST of EY665385 vs. ExPASy Swiss-Prot
Match: CB21_ARATH (Chlorophyll a-b binding protein 165/180, chloroplastic OS=Arabidopsis thaliana GN=LHCP-A PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.644e-15 Identity = 44/97 (45.36%), Postives = 57/97 (58.76%), Query Frame = 3 Query: 318 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLNKKPDDFSKYQAYELISAKWAMLGAAGFSIPETFNKFGATCGPEAVWFKNWEALLSEG 608 WYG DR +L E P YLTGE PGDYG+D GL+ P+ F++ + E+I ++WAMLGA G PE + G G EAVWFK + S+G Sbjct: 50 WYGSDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSDG 142
BLAST of EY665385 vs. ExPASy Swiss-Prot
Match: CB22_CUCSA (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.817e-14 Identity = 40/79 (50.63%), Postives = 50/79 (63.29%), Query Frame = 3 Query: 372 EIPEYLTGEVPGDYGYDPFGLNKKPDDFSKYQAYELISAKWAMLGAAGFSIPETFNKFGATCGPEAVWFKNWEALLSEG 608 E P YLTGE PGDYG+D GL+ P+ F+K + E+I + WAMLGA G PE ++ G G EAVWFK + SEG Sbjct: 5 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGSQIFSEG 82
BLAST of EY665385 vs. ExPASy Swiss-Prot
Match: CB48_MAIZE (Chlorophyll a-b binding protein 48, chloroplastic OS=Zea mays GN=CAB48 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.178e-13 Identity = 43/97 (44.33%), Postives = 55/97 (56.70%), Query Frame = 3 Query: 318 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLNKKPDDFSKYQAYELISAKWAMLGAAGFSIPETFNKFGATCGPEAVWFKNWEALLSEG 608 WYG DR ++L G L S P YLTGE PGDYG+D GL+ P+ F+K + E+I +WA+ G PE + G G E VWFK + SEG Sbjct: 48 WYGADRVLYL--GPLSGSP-PSYLTGEFPGDYGWDTEGLSADPETFAKNRELEVIHCRWAIAVGLGCVFPELLARNGVKFG-EGVWFKAGSQIFSEG 140
BLAST of EY665385 vs. ExPASy Swiss-Prot
Match: CB2_MALDO (Chlorophyll a-b binding protein AB10, chloroplastic OS=Malus domestica PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 2.456e-11 Identity = 37/79 (46.84%), Postives = 47/79 (59.49%), Query Frame = 3 Query: 372 EIPEYLTGEVPGDYGYDPFGLNKKPDDFSKYQAYELISAKWAMLGAAGFSIPETFNKFGATCGPEAVWFKNWEALLSEG 608 E P YLTGE PGDYG+D GL+ P+ F+K + E+I ++ AM A G PE + G G EAVWFK + SEG Sbjct: 68 EWPSYLTGEFPGDYGWDTAGLSAYPETFAKNRELEVIHSRCAMSAALGCIFPELLSVMGQGFG-EAVWFKAGAQIFSEG 145
BLAST of EY665385 vs. ExPASy Swiss-Prot
Match: CB2_DUNSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella salina PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 4.189e-11 Identity = 38/99 (38.38%), Postives = 54/99 (54.55%), Query Frame = 3 Query: 315 KWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLNKKPDDFSKYQAYELISAKWAMLGAAGFSIPETF-NKFGATCGPEAVWFKNWEALLSEG 608 ++YGPD G + + P TGE PGDYG+D GL+ P+ F +Y+ ELI A+ +LGA G PE ++ G G A+WFK A+ +G Sbjct: 56 QFYGPDAT----SGWDLQHQHPRLPTGEFPGDYGWDTAGLSADPETFKRYRELELIHARCGLLGALGMVTPELLADEDGIKFGDAAIWFKAGAAIFQDG 150
BLAST of EY665385 vs. ExPASy Swiss-Prot
Match: CB12_PETHY (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 4.189e-11 Identity = 35/84 (41.67%), Postives = 46/84 (54.76%), Query Frame = 3 Query: 327 PDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLNKKPDDFSKYQAYELISAKWAMLGAAGFSIPETFNKFGATCGPEAVWF 578 PDR ++ P S PE+L G +PGD+G+DP GL P+ EL+ ++WAMLGAAG IPE K G P W+ Sbjct: 63 PDRPLWFPG-----STPPEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAGIFIPEFLTKIGVLNTPS--WY 139
BLAST of EY665385 vs. ExPASy Swiss-Prot
Match: CB24_ARATH (Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 9.333e-11 Identity = 30/67 (44.78%), Postives = 42/67 (62.69%), Query Frame = 3 Query: 378 PEYLTGEVPGDYGYDPFGLNKKPDDFSKYQAYELISAKWAMLGAAGFSIPETFNKFGATCGPEAVWF 578 P+YLTG + GD G+DP GL + P++ + EL++ +WAMLG AG +PE F K G PE W+ Sbjct: 64 PDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINVPE--WY 128 The following BLAST results are available for this feature:
BLAST of EY665385 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665385 ID=EY665385; Name=EY665385; organism=Citrus sinensis; type=EST; length=1051bpback to top |