CV885282

Overview
NameCV885282
Unique NameCV885282
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length845
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: BETB1_RHIME (Betaine aldehyde dehydrogenase 1 OS=Rhizobium meliloti GN=betB1 PE=3 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 3.681e-17
Identity = 60/207 (28.99%), Postives = 95/207 (45.89%), Query Frame = -1
Query:  237 GGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFC------QEYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVINL 836
            G F  +GQ C+    V V   + +            + +G P +E+  + P+VS +  + +   +   K +GA              EG  I P +  +V   M IA EE FGPV+ V+      E I   NA+ FGL   VFT D+ +A  ++D +E GT+ IN+     P   PF G K SG G +    ++N  T++K+  + +
Sbjct:  275 GNFYSTGQVCSNGTRVFVQRKIKEPFLARLKERTEAIVIGDPLDEATQLGPMVSAAQRDKVFSYIGKGKAEGARLVTGGGIPNNVSGEGTYIQPTVFADVTDGMTIAREEIFGPVMCVLDFDDEVEVIARANATEFGLSAGVFTADLTRAHRVADRLEAGTLWINTYNL-CPVEIPFGGSKQSGFGRENSVAALNHYTELKTVYVGM 480          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: IOLA_BACSU (Methylmalonate semialdehyde dehydrogenase [acylating] OS=Bacillus subtilis GN=iolA PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.807e-17
Identity = 58/215 (26.98%), Postives = 96/215 (44.65%), Query Frame = -1
Query:  222 IIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRR----EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVT--NSINMMTKVKSTVINLPSPSY 845
            I+   F  +G+RC A  VV V E +AD            + +G   ++   + PV+ E +       +    ++GA    + R     +G  + P + DNV  +M I  +E F PVL VIR+ +++E I   N S F    C+FT + N      + ++ G + IN         FPF G+K S  G+      +S++  T+ K      P+P +
Sbjct:  272 IVGAAFGSAGERCMACAVVTVEEGIADEFMAKLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAIRYFRENIDAGMLGINLGVPAPMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKVVTARYPAPDF 486          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: IOLA2_OCEIH (Methylmalonate semialdehyde dehydrogenase [acylating] 2 OS=Oceanobacillus iheyensis GN=iolA2 PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.807e-17
Identity = 52/189 (27.51%), Postives = 88/189 (46.56%), Query Frame = -1
Query:  300 IIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFCQEYR------REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIG 845
            I+   F  +G+RC A  VV V E VAD           ++ +G   +E   + PV+ +         +   +++GA   ++ R      +EG  + P + D+V  +M+I  +E F PVL + R+ ++EEG+   N S F    C+FT+D        + ++ G + +N          PF G+KDS  G
Sbjct:  274 ILNAAFGSAGERCMAASVVAVEEDVADEFVTLLTQKANEIKIGNGLDEGVFLGPVIRDQHKERTLQYIESGEEEGANLVRDGRTDEAAKQEGYFVGPTIFDHVTSEMKIWQDEIFAPVLSIARVNNLEEGVDLANESRFANGACIFTRDGGSVRRFRETIDAGMLGVNIGVPAPMAFLPFSGWKDSFYG 462          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: ALDH5_BACSU (Putative aldehyde dehydrogenase yfmT OS=Bacillus subtilis GN=yfmT PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.807e-17
Identity = 55/193 (28.50%), Postives = 91/193 (47.15%), Query Frame = -1
Query:  255 FSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVK 830
            F++ GQ C +   VLV  S+ D            L VG P +    I P+++    + +   V  A ++GA   +     G ++ P +L +V+P M IA EE FGPV+  ++  S +E +   N + FGL G V T ++ + +  +  +ETG + +N        +  F G K SG+G      S+   T +K
Sbjct:  280 FTHQGQICMSANRVLVHSSIYDKFLELYQAKVESLKVGDPMDPDTIIGPLINSRQTDGLMKTVEQAIEEGAVPVKLGGFNGTIVEPTILKDVKPFMSIAKEELFGPVVSFMKFDSEDEAVDIANETPFGLSGAVHTSNLERGVAFAKRIETGMIHVNDTTINDEPNVAFGGEKQSGLGRLNGEWSLEEFTTLK 472          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: A9A1A_DANRE (Aldehyde dehydrogenase family 9 member A1-A OS=Danio rerio GN=aldh9a1a PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.807e-17
Identity = 60/212 (28.30%), Postives = 98/212 (46.23%), Query Frame = -1
Query:  237 IKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPPE-ESCDITPVVSESSANFIEGLVMDAKQKGA-TFCQEYR--------REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVINL 842
            +   F   G+ C     V V   +              ++VG P  E   +  ++S+     + G +  AK++G    C   R        ++G  + P +LDN R DM    EE FGPV+ V+   + EE +   N + FGL   VFT+DI +A  ++  ++ GT  IN+    GP   PF G+K SG G +  T +I   +++K+ V+ +
Sbjct:  291 LMANFLTQGEVCCNGTRVFVQREIMPKFLEEVVKRTKAISVGDPLCEGTRMGALISKPHMEKVLGFIKQAKEQGGKVLCGGERFVPNDPKLKDGYFVSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDIARAHRVAANLQAGTCYINNYNV-GPVEVPFGGYKMSGFGRENGTVTIEYYSQLKTVVVEM 501          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: ALDH2_LEITA (Aldehyde dehydrogenase, mitochondrial OS=Leishmania tarentolae GN=ALDH2 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.278e-17
Identity = 60/194 (30.93%), Postives = 97/194 (50.00%), Query Frame = -1
Query:  252 SGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPPEESCD-ITPVVSESSANFIEGLVMDAKQKGATFCQEYRR---EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKS 821
            +GQ CTA   + V ESV D              VGP  ++ + + P+VS+     + G + D  + GAT     ++   +G  + P +  +V+ DMRI  EE FGPV  V++   ++E +   N S +GL   + T+ ++ A+  S  +  GTV +N+     P   PF GFK SGIG +     ++M T+ K+
Sbjct:  295 TGQVCTASSRIYVHESVYDEFVSRLRKNAEARKVGPGNDTGNNMGPLVSKKQHERVLGYIEDGVKAGATVVTGGKKIGDKGYFVQPTIFSDVKEDMRICKEEIFGPVTCVMKYKDMDEVVKRANDSIYGLAAGICTRSMDTALRYSTYLNAGTVWVNTWNNFCPS-MPFGGFKQSGIGRELGKEVVDMYTEPKA 487          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: ALD1_STAS1 (Putative aldehyde dehydrogenase SSP0762 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=SSP0762 PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.278e-17
Identity = 61/197 (30.96%), Postives = 96/197 (48.73%), Query Frame = -1
Query:  252 SGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFCQ------EYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKS 821
            +GQ CTA    +V  S+ +           ++ VG P EE   + P++S+   + ++  +    ++GA          E   +G    P + +NV   M IA EE FGPV+ VI    ++E I   N + +GL G V+  D +    ++ ++E GTV+IN A  R PD  PF G+K SG+G +     I    +VKS
Sbjct:  275 TGQVCTAGTRTIVPASIKEDFLTAVKEKFSQVKVGNPREEGTQVGPIISKKQFDQVQAYIDKGIEEGAELLYGGPGKPEGLDKGYFARPTIFNNVDNSMTIAQEEIFGPVMSVITYNDLDEAIKIANDTKYGLAGYVYGSDKDTLHKVARSIEAGTVEINEA-GRKPD-LPFGGYKQSGLGREWGDYGIEEFLEVKS 469          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: BADH1_ARATH (Betaine aldehyde dehydrogenase 1, chloroplastic OS=Arabidopsis thaliana GN=ALDH10A8 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 8.199e-17
Identity = 65/188 (34.57%), Postives = 89/188 (47.34%), Query Frame = -1
Query:  294 GGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFCQ-----EYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQIN-SAPARGPDHFPFQGFKDSGIGSQ 836
            G F  +GQ C+A   +LV ES+A             + +  P EE C + PVVS+     I   +  AK +GAT        E+  +G  I P ++ +V   M+I  EE FGPVL V    S +E I   N S++GL   V + D  +   IS+A E G V IN S P       P+ G K SG G +
Sbjct:  285 GCFWTNGQICSATSRLLVHESIASEFIEKLVKWSKNIKISDPMEEGCRLGPVVSKGQYEKILKFISTAKSEGATILHGGSRPEHLEKGFFIEPTIITDVTTSMQIWREEVFGPVLCVKTFASEDEAIELANDSHYGLGAAVISNDTERCDRISEAFEAGIVWINCSQPCF--TQAPWGGVKRSGFGRE 470          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: ALDH5_YEAS7 (Aldehyde dehydrogenase 5, mitochondrial OS=Saccharomyces cerevisiae (strain YJM789) GN=ALD5 PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 8.199e-17
Identity = 65/207 (31.40%), Postives = 100/207 (48.31%), Query Frame = -1
Query:  228 GGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRREGN---LIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVINLPSP 836
            G F  SG+ C A   + + ++V + +          L VG P +E        S+   + I   V  AK +GA       R G+    + P +  +V+ DMRI  EE FGP++ V +  +V+E I   N S +GL   + T DINKA+ +S  ++ GTV IN+       + PF GF  SGIG +    +++  T+ KS  I +  P
Sbjct:  313 GIFYNSGEVCCAGSRIYIQDTVYEEVLQKLKDYTESLKVGDPFDEEVFQGAQTSDKQLHKILDYVDVAKSEGARLVTGGARHGSKGYFVKPTVFADVKEDMRIVKEEVFGPIVTVSKFSTVDEVIAMANDSQYGLAAGIHTNDINKAVDVSKRVKAGTVWINTY-NNFHQNVPFGGFGQSGIGREMGEAALSNYTQTKSVRIAIDKP 518          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: ALDH4_YEAST (Potassium-activated aldehyde dehydrogenase, mitochondrial OS=Saccharomyces cerevisiae GN=ALD4 PE=1 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 8.199e-17
Identity = 68/204 (33.33%), Postives = 98/204 (48.04%), Query Frame = -1
Query:  252 IIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRR---EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDH--FPFQGFKDSGIGSQGVTNSINMMTKVKS 845
            II G +  SG+ C A   V V ES+ D            + VG P +ES       S+   N I   V   K +GAT      R   +G  I P +  +V+ DMRI  EE FGPV+ V +  S +E I+  N S +GL   + T +IN A+ ++D +  GTV IN+       H   PF GF  SG+G +   +++    +VK+
Sbjct:  312 IILGIYYNSGEVCCAGSRVYVEESIYDKFIEEFKAASESIKVGDPFDESTFQGAQTSQMQLNKILKYVDIGKNEGATLITGGERLGSKGYFIKPTVFGDVKEDMRIVKEEIFGPVVTVTKFKSADEVINMANDSEYGLAAGIHTSNINTALKVADRVNAGTVWINT---YNDFHHAVPFGGFNASGLGREMSVDALQNYLQVKA 512          
The following BLAST results are available for this feature:
BLAST of CV885282 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 339
Match NameE-valueIdentityDescription
BETB1_RHIME3.681e-1728.99Betaine aldehyde dehydrogenase 1 OS=Rhizobium meli... [more]
IOLA_BACSU4.807e-1726.98Methylmalonate semialdehyde dehydrogenase [acylati... [more]
IOLA2_OCEIH4.807e-1727.51Methylmalonate semialdehyde dehydrogenase [acylati... [more]
ALDH5_BACSU4.807e-1728.50Putative aldehyde dehydrogenase yfmT OS=Bacillus s... [more]
A9A1A_DANRE4.807e-1728.30Aldehyde dehydrogenase family 9 member A1-A OS=Dan... [more]
ALDH2_LEITA6.278e-1730.93Aldehyde dehydrogenase, mitochondrial OS=Leishmani... [more]
ALD1_STAS16.278e-1730.96Putative aldehyde dehydrogenase SSP0762 OS=Staphyl... [more]
BADH1_ARATH8.199e-1734.57Betaine aldehyde dehydrogenase 1, chloroplastic OS... [more]
ALDH5_YEAS78.199e-1731.40Aldehyde dehydrogenase 5, mitochondrial OS=Sacchar... [more]
ALDH4_YEAST8.199e-1733.33Potassium-activated aldehyde dehydrogenase, mitoch... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_013G05_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_013_T3_G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885282 ID=CV885282; Name=CV885282; organism=Citrus sinensis; type=EST; length=845bp
GAAACTATTGCGTTCTGTCTCACATATTACATATATGTTGATGCACATAT
CTCCATTATTTATCATCTGCAAAGCGTGAAGTACTAGAAAGGCAGATACA
TAATACAATTCTGCAGATAAAACTCGTCCCTCTTCATCGCTAGTTATTAT
ACCTAAACTAAAATACCGTTCGTTCTTAACTGTTTCCTAATGGCTTAATT
ATACTTGAATTAACCCATGGTATAAGAAGGACTTGGCAAATTGATAACAG
TGCTTTTGACCTTAGTCATCATGTTGATGCTGTTGGTAACACCTTGTGAG
CCAATTCCACTGTCCTTAAAACCCTGGAAAGGAAAATGATCTGGTCCACG
AGCTGGGGCAGAGTTGATCTGGACGGTTCCTGTCTCCATTGCATCGCTGA
TCAACATTGCTTTGTTAATGTCCTTTGTAAATACACAGCCCTGAAGTCCA
AAGTTGCTAGCATTGCAGTGGTGAATACCTTCCTCAACAGAGCCAATCCT
GATAACAGGCAGAACCGGTCCGAATGGCTCCTCCCATGCGATCCTCATAT
CGGGCCTAACATTGTCAAGCAACAAGGGCCAGATGAGGTTGCCTTCTCTC
CTGTACTCTTGACAGAATGTTGCTCCTTTCTGTTTGGCATCCATAACCAG
CCCTTCAATGAAATTTGCAGATGATTCCGACACAACTGGAGTGATATCAC
AGCTTTCTTCAGGAGGGCCAACTGTCAGTTTCACCACTTTAGCCTTAACC
TTCTCGACCAGGGAATCTGCTACAGATTCCATCACCAAGACAACCTTAAC
TGCAGTGCATCTTTGACCACTGTAAGAAAATCCTCCTTTTATTAT
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