CV885282

Overview
NameCV885282
Unique NameCV885282
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length845
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: ALD1_STAHJ (Putative aldehyde dehydrogenase SH0913 OS=Staphylococcus haemolyticus (strain JCSC1435) GN=SH0913 PE=3 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 8.199e-17
Identity = 63/197 (31.98%), Postives = 93/197 (47.21%), Query Frame = -1
Query:  252 SGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFCQ------EYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKS 821
            +GQ CTA   +L+ ES  +           K+ VG P EE   + P++S+   + ++  +    ++GA          E    G    P +  NV  DM IA EE FGPV  VI   +++E I   N + +GL G V  KD      ++ ++E G ++IN A    PD  PF G+K SGIG +     I    +VKS
Sbjct:  275 TGQVCTAGTRILIPESKKEDFLTALKEEFSKVKVGDPREEGTQVGPIISKKQFDTVQSYIDKGIEEGAELFYGGPGKPEGLNTGYFARPTIFINVDNDMTIAQEEIFGPVASVITYNNLDEAIKIANDTKYGLAGYVIGKDKETLQKVARSIEAGRIEINEA-GNQPD-LPFGGYKQSGIGREWGDYGIEEFLEVKS 469          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: YOSF_SCHPO (Putative aldehyde dehydrogenase-like protein C21C3 OS=Schizosaccharomyces pombe GN=SPBC21C3.15c PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.071e-16
Identity = 56/190 (29.47%), Postives = 88/190 (46.32%), Query Frame = -1
Query:  300 IIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGP-PEESCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRR-------EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIG 845
            +++G F  +GQ C  ++ ++ ++ V D++          + +G   +   D+  +VS +  + +E L+ DA  KGA       R       +GN   P LL +   +M+IA EE F P+  V R  S E  +   N + FGL   VF +D       +D +ETG V +N   A      PF G K SG G
Sbjct:  261 VMRGVFQSAGQNCIGIERIIALDGVYDTIITKLYNRISTMRLGMYTQNDVDMGAMVSNNRFDHLESLIQDAVSKGARLVYGGHRFQHPKYPKGNYFLPTLLVDATNEMKIAQEECFAPIALVFRAKSPEHALEIANGTEFGLGASVFGRDKQLCQYFTDNLETGMVAVNDFGAFYLLQMPFGGCKKSGYG 450          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: ALDH5_YEAST (Aldehyde dehydrogenase 5, mitochondrial OS=Saccharomyces cerevisiae GN=ALD5 PE=1 SV=3)

HSP 1 Score: 87.4261 bits (215), Expect = 1.071e-16
Identity = 65/207 (31.40%), Postives = 100/207 (48.31%), Query Frame = -1
Query:  228 GGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRREGN---LIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVINLPSP 836
            G F  SG+ C A   + + ++V + +          L VG P +E        S+   + I   V  AK +GA       R G+    + P +  +V+ DMRI  EE FGP++ V +  +V+E I   N S +GL   + T DINKA+ +S  ++ GTV IN+       + PF GF  SGIG +    +++  T+ KS  I +  P
Sbjct:  313 GIFYNSGEVCCAGSRIYIQDTVYEEVLQKLKDYTESLKVGDPFDEEVFQGAQTSDKQLHKILDYVDVAKSEGARLVTGGARHGSKGYFVKPTVFADVKGDMRIVKEEVFGPIVTVSKFSTVDEVIAMANDSQYGLAAGIHTNDINKAVDVSKRVKAGTVWINTY-NNFHQNVPFGGFGQSGIGREMGEAALSNYTQTKSVRIAIDKP 518          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: AL1A1_HORSE (Retinal dehydrogenase 1 OS=Equus caballus GN=ALDH1A1 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.071e-16
Identity = 62/202 (30.69%), Postives = 97/202 (48.02%), Query Frame = -1
Query:  237 FSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATF-CQ--EYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVINL 830
            F + GQ C A   + V ES+ D           K  +G P        P + +   + I  L+   K++GA   C    +  +G  I P +  NV  +MRIA EE FGPV  +++  S+++ I   N + +GL    FTKD++KA+ +S A++ GTV +N          PF GFK SG G +      +  T+VK+  + +
Sbjct:  295 FYHQGQCCVAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYDKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSNVSDEMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTTYGLFAGSFTKDLDKAITVSAALQAGTVWVNCYGVVSA-QCPFGGFKMSGNGREMGEYGFHEYTEVKTVTVKI 495          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: BETB_BURPS (Betaine aldehyde dehydrogenase OS=Burkholderia pseudomallei GN=betB PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.399e-16
Identity = 55/210 (26.19%), Postives = 98/210 (46.67%), Query Frame = -1
Query:  237 IKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPPEE-SCDITPVVSESSANFIEGLVMDAKQKGATFC-------QEYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVINL 842
            +   F  +GQ CT    V V ++V D+          ++ VG P +   +  P+ S +  + + G +   K +GA           ++   G  + P +  + R DMRI  EE FGPV+ ++   + +E I   NA+++GL   V T+++++A      +E G   IN+     P   P  G+K SG+G +    ++   T++KS  + L
Sbjct:  274 VTANFFSAGQVCTNGTRVFVQQAVKDAFVERVLARVARIRVGKPSDPDTNFGPLASAAQLDKVLGYIDSGKAEGAKLLAGGARLVNDHFASGQYVAPTVFGDCRDDMRIVREEIFGPVMSILPFETEDEAIARANATDYGLAAGVVTENLSRAHRAIHRLEAGICWINTW-GESPAEMPVGGYKQSGVGRENGITTLEHYTRIKSVQVEL 482          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: AL9A1_MOUSE (4-trimethylaminobutyraldehyde dehydrogenase OS=Mus musculus GN=Aldh9a1 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.399e-16
Identity = 59/212 (27.83%), Postives = 96/212 (45.28%), Query Frame = -1
Query:  237 IKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPPE-ESCDITPVVSESSANFIEGLVMDAKQKGATFC---------QEYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVINL 842
            +   F   GQ C     V V + +AD           K+ +G P  E   + P+++      + G V  AK++GAT               + G  + P +L N R DM    EE FGPV+ ++  G+  E +   N + FGL   VFT+DI +A  ++  ++ GT  IN+     P   PF G+K SG G +    +I   +++K+  + +
Sbjct:  277 LMANFLTQGQVCCNGTRVFVQKEIADKFINEVVKQTQKIKLGDPLLEDTRMGPLINAPHLERVLGFVKLAKEQGATVLCGGEVYVPEDPKLKHGYYMTPCILTNCRDDMTCVKEEIFGPVMSILTFGTEAEVLERANDTTFGLAAGVFTRDIQRAHRVAAELQAGTCYINNYNV-SPVELPFGGYKKSGFGRENGRVTIEYYSQLKTVCVEM 487          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: IOLA2_GEOKA (Methylmalonate semialdehyde dehydrogenase [acylating] 2 OS=Geobacillus kaustophilus GN=iolA2 PE=3 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.827e-16
Identity = 54/189 (28.57%), Postives = 90/189 (47.62%), Query Frame = -1
Query:  300 IIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRRE------GNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIG 845
            II   F  +G+RC A  VV+ +  +AD L         +L +G   EES  + PV+ E+        +   +++GA   ++ R++      G  I P + D V  DM I  +E F PVL ++R+ +++E I   N S F    C++T+D        + ++ G + +N         FPF G+K+S  G
Sbjct:  273 IINAAFGSAGERCMAASVVVAVGEIADELVEKLVAAANELKIGNGLEESVFLGPVIREAHKQRTVKYIELGEKEGAILVRDGRKDAAVQDNGYFIGPTIFDRVTTDMTIWKDEIFAPVLSIVRVETLDEAIEVANKSPFANGACIYTRDGGNVRKFREEIDAGMLGVNLGVPAPMAFFPFSGWKNSFYG 461          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: BETB_BURVG (Betaine aldehyde dehydrogenase OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=betB PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.827e-16
Identity = 57/206 (27.67%), Postives = 97/206 (47.09%), Query Frame = -1
Query:  237 FSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPPEES-CDITPVVSESSANFIEGLVMDAKQKGATFCQEYRR-------EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVINL 830
            F  SGQ CT    V V  S+ D+          ++ VG P ++  +  P+VS +  + + G +   K +GA       R       +G  + P +  + R DM+I  EE FGPV+ ++   S +E I   N +++GL   V T+++++A      +E G   IN+     P   P  G+K SG+G +    ++   T++KS  + L
Sbjct:  278 FFSSGQVCTNGTRVFVQRSIKDAFTAKVLERVKRIRVGKPTDADTNFGPLVSAAQLDKVLGFIASGKAEGAKLLAGGTRLTDGHFADGQYVAPTVFGDCRDDMKIVREEIFGPVMSILDFESEDEVIARANDTHYGLAAGVVTENLSRAHRTIHRLEAGICWINTW-GESPAEMPVGGYKQSGVGRENGITTLEHYTRIKSVQVEL 482          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: BETB_AGRRK (Betaine aldehyde dehydrogenase OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=betB PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.827e-16
Identity = 60/207 (28.99%), Postives = 93/207 (44.93%), Query Frame = -1
Query:  237 GGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFC------QEYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVINL 836
            G F  +GQ C+    V V   +              + +G P +E+  + P+VS +    +   +   K +GAT             EG  + P +  +V  DM IA EE FGPV+ V+      E I   N + FGL G VFT D+ +A  + D +E GT+ IN A    P   PF G K SG G +    ++   +++K+  + +
Sbjct:  275 GNFYSTGQVCSNGTRVFVNRKIKAEFLKRLKARTEAMLIGDPMDEATQVGPMVSWAQREKVLSYIEKGKAEGATLVAGGGIPNNVSGEGYYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEAEVIARANDTEFGLSGGVFTADLTRAHRVVDQLEAGTLWIN-AYNLAPVEIPFGGSKQSGFGRENSLAALEHYSELKTVYVGM 480          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: BADH_GADCA (Betaine aldehyde dehydrogenase OS=Gadus callarias GN=aldh9A1 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.827e-16
Identity = 59/212 (27.83%), Postives = 98/212 (46.23%), Query Frame = -1
Query:  237 IKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPPE-ESCDITPVVSESSANFIEGLVMDAKQKGA---------TFCQEYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVINL 842
            +   F   GQ CT    V V   +              + VG P      +  ++S+   + + G V  AK++GA         T      + G  + P +LDN R DM    EE FGPV+ V+   + EE +   N + FGL   VFT+DI++A  ++  +E GT  IN+  +  P   PF G+K SG G +    +++  +++K+ ++ +
Sbjct:  286 LMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTY-SISPVEVPFGGYKMSGFGRENGQATVDYYSQLKTVIVEM 496          
The following BLAST results are available for this feature:
BLAST of CV885282 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 339
Match NameE-valueIdentityDescription
ALD1_STAHJ8.199e-1731.98Putative aldehyde dehydrogenase SH0913 OS=Staphylo... [more]
YOSF_SCHPO1.071e-1629.47Putative aldehyde dehydrogenase-like protein C21C3... [more]
ALDH5_YEAST1.071e-1631.40Aldehyde dehydrogenase 5, mitochondrial OS=Sacchar... [more]
AL1A1_HORSE1.071e-1630.69Retinal dehydrogenase 1 OS=Equus caballus GN=ALDH1... [more]
BETB_BURPS1.399e-1626.19Betaine aldehyde dehydrogenase OS=Burkholderia pse... [more]
AL9A1_MOUSE1.399e-1627.834-trimethylaminobutyraldehyde dehydrogenase OS=Mus... [more]
IOLA2_GEOKA1.827e-1628.57Methylmalonate semialdehyde dehydrogenase [acylati... [more]
BETB_BURVG1.827e-1627.67Betaine aldehyde dehydrogenase OS=Burkholderia vie... [more]
BETB_AGRRK1.827e-1628.99Betaine aldehyde dehydrogenase OS=Agrobacterium ra... [more]
BADH_GADCA1.827e-1627.83Betaine aldehyde dehydrogenase OS=Gadus callarias ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_013G05_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_013_T3_G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885282 ID=CV885282; Name=CV885282; organism=Citrus sinensis; type=EST; length=845bp
GAAACTATTGCGTTCTGTCTCACATATTACATATATGTTGATGCACATAT
CTCCATTATTTATCATCTGCAAAGCGTGAAGTACTAGAAAGGCAGATACA
TAATACAATTCTGCAGATAAAACTCGTCCCTCTTCATCGCTAGTTATTAT
ACCTAAACTAAAATACCGTTCGTTCTTAACTGTTTCCTAATGGCTTAATT
ATACTTGAATTAACCCATGGTATAAGAAGGACTTGGCAAATTGATAACAG
TGCTTTTGACCTTAGTCATCATGTTGATGCTGTTGGTAACACCTTGTGAG
CCAATTCCACTGTCCTTAAAACCCTGGAAAGGAAAATGATCTGGTCCACG
AGCTGGGGCAGAGTTGATCTGGACGGTTCCTGTCTCCATTGCATCGCTGA
TCAACATTGCTTTGTTAATGTCCTTTGTAAATACACAGCCCTGAAGTCCA
AAGTTGCTAGCATTGCAGTGGTGAATACCTTCCTCAACAGAGCCAATCCT
GATAACAGGCAGAACCGGTCCGAATGGCTCCTCCCATGCGATCCTCATAT
CGGGCCTAACATTGTCAAGCAACAAGGGCCAGATGAGGTTGCCTTCTCTC
CTGTACTCTTGACAGAATGTTGCTCCTTTCTGTTTGGCATCCATAACCAG
CCCTTCAATGAAATTTGCAGATGATTCCGACACAACTGGAGTGATATCAC
AGCTTTCTTCAGGAGGGCCAACTGTCAGTTTCACCACTTTAGCCTTAACC
TTCTCGACCAGGGAATCTGCTACAGATTCCATCACCAAGACAACCTTAAC
TGCAGTGCATCTTTGACCACTGTAAGAAAATCCTCCTTTTATTAT
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