CV885282

Overview
NameCV885282
Unique NameCV885282
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length845
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: NAHF_PSEPU (Salicylaldehyde dehydrogenase OS=Pseudomonas putida GN=nahF PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.306e-22
Identity = 67/196 (34.18%), Postives = 100/196 (51.02%), Query Frame = -1
Query:  255 GGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPP--EESCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVK 836
            G F + GQ C + + ++V E +AD           +L+ G P     C I P+VS +S   I GL  DA  KGA        +G L+   +LD+V+ DMRI  EE FGP+  VIR     E +   N S +GL   VF +DIN+A+ +  ++E G+V IN +  +     P+ G K++G G       I+  T++K
Sbjct:  275 GSFLFQGQICMSTERLIVDEKIADEFVAKFVEKTKRLSAGDPCVTGDCIIGPMVSPNSGERINGLFKDAIDKGAKVVCGGLAQGALMPATILDHVKSDMRIYDEETFGPITVVIRCKGEAEAVRIANDSVYGLSSGVFGRDINRALRVGMSIEYGSVHINGSTVQNEAQAPYGGTKNTGYGRFDGRAVIDEFTEIK 470          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: GABD_DEIRA (Succinate-semialdehyde dehydrogenase [NADP+] OS=Deinococcus radiodurans GN=ssdA PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 8.465e-22
Identity = 64/185 (34.59%), Postives = 94/185 (50.81%), Query Frame = -1
Query:  294 GGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPPEE-SCDITPVVSESSANFIEGLVMDAKQKGATFC---QEYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQ 836
            G  S +GQ C A K ++V++ + D               G P + S  + P+ SE +A  ++  V DA  KGAT     Q     G  + P +L +V PDMR   EE FGPV  V R+   +E +   NAS +GL G VF+ D+++A  +++ ++TG V IN   +   D  PF G K SG G +
Sbjct:  265 GRLSNTGQACIAAKRLMVVDDLYDEFVSRLGQTFSAFVPGDPADPSTRLGPLSSEQAARDLQAQVQDAIDKGATVVAGGQRPEHPGAFVQPTVLTDVTPDMRAYHEELFGPVAVVYRVRDEDEAVALANASTYGLGGAVFSSDLDRAQRVAERLDTGMVWINHPTSSAAD-LPFGGVKRSGFGRE 448          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: AL1A2_TAEGU (Retinal dehydrogenase 2 OS=Taeniopygia guttata GN=ALDH1A2 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.597e-20
Identity = 73/206 (35.44%), Postives = 103/206 (50.00%), Query Frame = -1
Query:  234 KGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATF-C--QEYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVINLP 839
            +G F   GQ CTA   + V ES+ +           +  VG P + + +  P + +   N I  L+     +GA   C  +   R+G  I P +  NV  DMRIA EE FGPV  ++R  +++E I   N S+FGL   VFT DINKA+ +S AM+ GTV IN   A      PF G K SG G +     +   ++VK+  I +P
Sbjct:  310 QGVFFNQGQCCTAGSRIYVEESIYEEFVRKSVKRAKRKIVGSPFDPTTEQGPQIDKKQYNKILELIQSGITEGAKLECGGKGLGRKGFFIEPTVFSNVTDDMRIAKEEIFGPVQEILRFKTMDEVIERANNSDFGLVAAVFTNDINKALTVSSAMQAGTVWINCYNALNAQS-PFGGSK-SGNGREMGECGLREYSEVKTVTIKIP 513          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: AL1A3_HUMAN (Aldehyde dehydrogenase family 1 member A3 OS=Homo sapiens GN=ALDH1A3 PE=1 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 4.645e-20
Identity = 72/205 (35.12%), Postives = 104/205 (50.73%), Query Frame = -1
Query:  237 KGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATF-CQEYRRE--GNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVINL 839
            +G F   GQ CTA   V V E V             K  VG P +   +  P + +   + I  L+   K++GA   C     E  G  I P +   V  +MRIA EE FGPV P+++  S+EE I   N++++GL   VFTK+++KA+ ++ A+E+GTV IN   A      PF GFK SG G +    ++   T+VK+  I L
Sbjct:  304 QGVFFNQGQCCTAASRVFVEEQVYSEFVRRSVEYAKKRPVGDPFDVKTEQGPQIDQKQFDKILELIESGKKEGAKLECGGSAMEDKGLFIKPTVFSEVTDNMRIAKEEIFGPVQPILKFKSIEEVIKRANSTDYGLTAAVFTKNLDKALKLASALESGTVWINCYNALYA-QAPFGGFKMSGNGRELGEYALAEYTEVKTVTIKL 507          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: AL1B1_PONAB (Aldehyde dehydrogenase X, mitochondrial OS=Pongo abelii GN=ALDH1B1 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.067e-20
Identity = 65/203 (32.02%), Postives = 98/203 (48.28%), Query Frame = -1
Query:  234 FSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPPEE-SCDITPVVSESSANFIEGLVMDAKQKGATFC---QEYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVINLP 830
            F   GQ C A     V ES+ +           +  VG P E      P V +     + G +   +++GA      + +   G  I P +   V+ DMRIA EE FGPV P+ +   +EE I   N + +GL   VFT+D++KAM  + A++ GTV +N+       H PF GFK+SG G +   + +   T+VK+  I +P
Sbjct:  312 FFNMGQCCCAGSRTFVEESIYNEFLERTVEKAKQRKVGNPFELDTQQGPQVDKEQFERVLGYIQLGQKEGAKLLCGGERFGERGFFIKPTVFGGVQDDMRIAKEEIFGPVQPLFKFKKMEEVIERANTTRYGLAAAVFTRDLDKAMYFTQALQAGTVWVNTYNI-VTCHTPFGGFKESGNGRELGEDGLKAYTEVKTVTIKVP 513          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: AL1B1_HUMAN (Aldehyde dehydrogenase X, mitochondrial OS=Homo sapiens GN=ALDH1B1 PE=1 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 7.923e-20
Identity = 64/203 (31.53%), Postives = 98/203 (48.28%), Query Frame = -1
Query:  234 FSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPPEE-SCDITPVVSESSANFIEGLVMDAKQKGATFC---QEYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVINLP 830
            F   GQ C A     V ES+ +           +  VG P E      P V +     + G +   +++GA      + +   G  I P +   V+ DMRIA EE FGPV P+ +   +EE +   N + +GL   VFT+D++KAM  + A++ GTV +N+       H PF GFK+SG G +   + +   T+VK+  I +P
Sbjct:  312 FFNMGQCCCAGSRTFVEESIYNEFLERTVEKAKQRKVGNPFELDTQQGPQVDKEQFERVLGYIQLGQKEGAKLLCGGERFGERGFFIKPTVFGGVQDDMRIAKEEIFGPVQPLFKFKKIEEVVERANNTRYGLAAAVFTRDLDKAMYFTQALQAGTVWVNTYNI-VTCHTPFGGFKESGNGRELGEDGLKAYTEVKTVTIKVP 513          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: AL1A1_CHICK (Retinal dehydrogenase 1 OS=Gallus gallus GN=ALDH1A1 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 7.923e-20
Identity = 68/205 (33.17%), Postives = 99/205 (48.29%), Query Frame = -1
Query:  234 GGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPPE-ESCDITPVVSESSANFIEGLVMDAKQKGATF-CQ--EYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVINLP 836
            G F + GQ C A   + V E + D           K T+G P        P + +     I  L+   K++GA   C    +  +G  I P +  NV  DMRIA EE FGPV  +++  +++E I   N + +GL   VFTKDI+KA+  + A++ GTV +N   A      PF GFK SG G +     +   T+VK+  I +P
Sbjct:  302 GLFYHQGQCCIAGSRIFVEEPIYDEFVRRSIERAKKYTLGDPLLPGVQQGPQIDKEQFQKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSNVTDDMRIAKEEIFGPVQQIMKFKTIDEVIKRANNTTYGLAAAVFTKDIDKALTFASALQAGTVWVNCYSAFSA-QCPFGGFKMSGNGRELGEYGLQEYTEVKTVTIKIP 505          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: Y4UC_RHISN (Putative aldehyde-dehydrogenase-like protein y4uC OS=Rhizobium sp. (strain NGR234) GN=NGR_a01370 PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.035e-19
Identity = 61/202 (30.20%), Postives = 97/202 (48.02%), Query Frame = -1
Query:  240 IKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVIN 842
            + G F  +GQ C   + +L+   +             KL  G P +E  D+ P++S+  A   E  V +A + GAT      REG+L  P +L+      R+  EE F PV+ +    ++++GI   N  ++ L   +FT D+N A+  ++ +E G V IN +     D  PF GFK   +G +GV  +   MT+ K   IN
Sbjct:  309 VSGAFWAAGQNCIGAQRILIQSELYGRFRDAFVAATKKLKAGDPLQEDTDVGPMISKQVAERTEAAVNEAIKAGATLLCGNYREGSLYHPTVLEGTPLTCRLWHEEVFAPVVMLAPFDTLDKGIEMANDPDYSLHAGIFTNDLNVALEAANRIEVGGVMINDSSDYRFDAMPFGGFKYGSMGREGVRFAYEDMTQPKVVCIN 510          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: AL1A7_MOUSE (Aldehyde dehydrogenase, cytosolic 1 OS=Mus musculus GN=Aldh1a7 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.035e-19
Identity = 67/205 (32.68%), Postives = 104/205 (50.73%), Query Frame = -1
Query:  237 KGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPPEES-CDITPVVSESSANFIEGLVMDAKQKGATFCQEYRREGN---LIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVINL 839
            +G F + GQ C A   + V ES+ D           K  +G P  S  +  P + +   N I GL+   K++GA       R GN    + P +  NV  +MRIA EE FGPV  +++  S+++ I   N + +GL   VFTKD++KA+ +S A++ G V +N   A  P   PF GFK SG G +   + +   T++K+  + +
Sbjct:  293 QGVFFHQGQICVAASRLFVEESIYDEFVRRSVERAKKYILGNPLNSGINQGPQIDKEQHNKILGLIESGKKEGAKLECGGGRWGNKGFFVQPTVFSNVTDEMRIAKEEIFGPVQQIMKFKSMDDVIKRANNTTYGLAAGVFTKDLDKAITVSSALQAGMVWVNCYLA-VPVQCPFGGFKMSGNGRELGEHGLYEYTELKTVAMQI 496          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: ALDH2_MOUSE (Aldehyde dehydrogenase, mitochondrial OS=Mus musculus GN=Aldh2 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.352e-19
Identity = 66/203 (32.51%), Postives = 96/203 (47.29%), Query Frame = -1
Query:  234 FSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPPEES-CDITPVVSESSANFIEGLVMDAKQKGATFC---QEYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVINLP 830
            F   GQ C A     V E+V D              VG P +S  +  P V E+    I G +   +Q+GA            G  I P +  +V+  M IA EE FGPV+ +++  ++EE +   N S +GL   VFTKD++KA  +S A++ GTV IN     G    PF G+K SG G +     +   T+VK+  + +P
Sbjct:  314 FFNQGQCCCAGSRTFVQENVYDEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKILGYIKSGQQEGAKLLCGGGAAADRGYFIQPTVFGDVKDGMTIAKEEIFGPVMQILKFKTIEEVVGRANDSKYGLAAAVFTKDLDKANYLSQALQAGTVWINCYDVFGAQS-PFGGYKMSGSGRELGEYGLQAYTEVKTVTVKVP 515          
The following BLAST results are available for this feature:
BLAST of CV885282 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 339
Match NameE-valueIdentityDescription
NAHF_PSEPU1.306e-2234.18Salicylaldehyde dehydrogenase OS=Pseudomonas putid... [more]
GABD_DEIRA8.465e-2234.59Succinate-semialdehyde dehydrogenase [NADP+] OS=De... [more]
AL1A2_TAEGU1.597e-2035.44Retinal dehydrogenase 2 OS=Taeniopygia guttata GN=... [more]
AL1A3_HUMAN4.645e-2035.12Aldehyde dehydrogenase family 1 member A3 OS=Homo ... [more]
AL1B1_PONAB6.067e-2032.02Aldehyde dehydrogenase X, mitochondrial OS=Pongo a... [more]
AL1B1_HUMAN7.923e-2031.53Aldehyde dehydrogenase X, mitochondrial OS=Homo sa... [more]
AL1A1_CHICK7.923e-2033.17Retinal dehydrogenase 1 OS=Gallus gallus GN=ALDH1A... [more]
Y4UC_RHISN1.035e-1930.20Putative aldehyde-dehydrogenase-like protein y4uC ... [more]
AL1A7_MOUSE1.035e-1932.68Aldehyde dehydrogenase, cytosolic 1 OS=Mus musculu... [more]
ALDH2_MOUSE1.352e-1932.51Aldehyde dehydrogenase, mitochondrial OS=Mus muscu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_013G05_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_013_T3_G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885282 ID=CV885282; Name=CV885282; organism=Citrus sinensis; type=EST; length=845bp
GAAACTATTGCGTTCTGTCTCACATATTACATATATGTTGATGCACATAT
CTCCATTATTTATCATCTGCAAAGCGTGAAGTACTAGAAAGGCAGATACA
TAATACAATTCTGCAGATAAAACTCGTCCCTCTTCATCGCTAGTTATTAT
ACCTAAACTAAAATACCGTTCGTTCTTAACTGTTTCCTAATGGCTTAATT
ATACTTGAATTAACCCATGGTATAAGAAGGACTTGGCAAATTGATAACAG
TGCTTTTGACCTTAGTCATCATGTTGATGCTGTTGGTAACACCTTGTGAG
CCAATTCCACTGTCCTTAAAACCCTGGAAAGGAAAATGATCTGGTCCACG
AGCTGGGGCAGAGTTGATCTGGACGGTTCCTGTCTCCATTGCATCGCTGA
TCAACATTGCTTTGTTAATGTCCTTTGTAAATACACAGCCCTGAAGTCCA
AAGTTGCTAGCATTGCAGTGGTGAATACCTTCCTCAACAGAGCCAATCCT
GATAACAGGCAGAACCGGTCCGAATGGCTCCTCCCATGCGATCCTCATAT
CGGGCCTAACATTGTCAAGCAACAAGGGCCAGATGAGGTTGCCTTCTCTC
CTGTACTCTTGACAGAATGTTGCTCCTTTCTGTTTGGCATCCATAACCAG
CCCTTCAATGAAATTTGCAGATGATTCCGACACAACTGGAGTGATATCAC
AGCTTTCTTCAGGAGGGCCAACTGTCAGTTTCACCACTTTAGCCTTAACC
TTCTCGACCAGGGAATCTGCTACAGATTCCATCACCAAGACAACCTTAAC
TGCAGTGCATCTTTGACCACTGTAAGAAAATCCTCCTTTTATTAT
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