CV885282

Overview
NameCV885282
Unique NameCV885282
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length845
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: BETB_BRUMB (Betaine aldehyde dehydrogenase OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=betB PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.497e-14
Identity = 56/209 (26.79%), Postives = 99/209 (47.37%), Query Frame = -1
Query:  237 GGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFC--------QEYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVINL 836
            G F  +GQ C+    V V +++ +           K+ +G P +E+  + P++S +  + +   +   K +GAT          Q + + G  I P +  +V   M IA EE FGPV+ V+     +E I   N S FGL   VFT D+++   +   ++ GT  IN+      +  PF G+K SGIG +    ++   +++K+  + +
Sbjct:  274 GNFYSTGQVCSNGTRVFVHKNIRERFIERLVERTRKIRIGDPFDEATQMGPLISAAQRDKVLSYIKKGKAEGATLACGGGVPKLQGFDK-GFFIEPTVFADVTDTMTIAREEIFGPVMSVLEFSDEDEVIARANDSEFGLAAGVFTADLSRGHHVIGQIKAGTCWINAYNLTSVE-VPFGGYKQSGIGRENGIAALAHYSQIKTVYVEM 480          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: ALDH2_YEAST (Aldehyde dehydrogenase [NAD(P)+] 1 OS=Saccharomyces cerevisiae GN=ALD2 PE=1 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 6.497e-14
Identity = 61/214 (28.50%), Postives = 98/214 (45.79%), Query Frame = -1
Query:  237 IIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKL-----TVGPPEESCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRR------EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVINL 845
            I  G F  SGQ CTA   V V  S+ D           K         P +E C + PV+S +  + I+  +   K++      +         +G  I P +  +V    ++  +E FGPV+ V +  + ++ +   N + +GL   VFTKD+ KA + +  ++ GTV INS+        PF GFK SGIG +   + ++   + K+  INL
Sbjct:  290 IAAGIFYNSGQNCTANSRVYVQSSIYDKFVEKFKETAKKEWDVAGKFDPFDEKCIVGPVISSTQYDRIKSYIERGKREEKLDMFQTSEFPIGGAKGYFIPPTIFTDVPQTSKLLQDEIFGPVVVVSKFTNYDDALKLANDTCYGLASAVFTKDVKKAHMFARDIKAGTVWINSSNDEDVT-VPFGGFKMSGIGRELGQSGVDTYLQTKAVHINL 502          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: ALDA_ECOLI (Lactaldehyde dehydrogenase OS=Escherichia coli (strain K12) GN=aldA PE=1 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 6.497e-14
Identity = 54/179 (30.17%), Postives = 85/179 (47.49%), Query Frame = -1
Query:  300 SGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPPEESCDIT--PVVSESSANFIEGLVMDAKQKGATFC---QEYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIG 821
            SGQ C   + V V + + D            +  G P E  DI   P+++ ++   +E  V  A ++GA      +    +G    P LL +VR +M I  EE FGPVLPV+   ++E+ I   N S++GL   ++T+++N AM     ++ G   IN         F   G++ SGIG
Sbjct:  281 SGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGF-HAGWRKSGIG 458          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: GABD1_MYCUA (Succinate-semialdehyde dehydrogenase [NADP+] 1 OS=Mycobacterium ulcerans (strain Agy99) GN=gabD1 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 8.485e-14
Identity = 57/201 (28.36%), Postives = 86/201 (42.79%), Query Frame = -1
Query:  252 IKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPPEE-SCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRREGNLIW---PLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKS 842
            + G    +GQ C A K  +    + D+           LTVG P +    + P+ +E S + I   V DA   GA      +      W   P ++ ++  DM +  EE FGPV  V R   ++E I   NA+ FGL    +T+D  +     + +E G V IN      P+  PF G K SG G +   + I     +K+
Sbjct:  255 VTGRVQNNGQSCIAAKRFIAHADIYDAFVDKFVEQMSALTVGDPTDPQTQVGPLATEQSRDEIAQQVDDAAAAGAVIRCGGKPLAGPGWYYPPTVITDITKDMNLYTEEVFGPVASVYRAADIDEAIEIANATTFGLGSNAWTQDEAEQRRFINDIEAGQVFINGMTVSYPE-LPFGGIKRSGYGRELAGHGIREFCNIKT 454          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: BETB_ERWCT (Betaine aldehyde dehydrogenase OS=Erwinia carotovora subsp. atroseptica GN=betB PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 8.485e-14
Identity = 55/207 (26.57%), Postives = 94/207 (45.41%), Query Frame = -1
Query:  237 FSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFCQ--------EYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVINL 830
            F  SGQ CT    V V +++             ++  G P +ES +  P+VS      +   +   K++GA            +Y  +G  + P +  + R DM+I  +E FGPV+ ++     +E I   N S +GL   + T+D+N+A  +   +E G   IN+     P   P  G+K SG+G +    ++   T++KS  + L
Sbjct:  279 FFSSGQVCTNGTRVFVPKALQAQFEEKILACVQRIRAGDPTDESVNFGPLVSFPHRESVLRYIESGKREGARVLVGGEPMTDGDYA-QGAYVAPTVFTDCRDDMKIVRKEIFGPVMSILTYQDEDEVIRRANDSEYGLAAGIVTRDLNRAHRVIHQLEAGICWINTW-GESPAEMPVGGYKHSGVGRENGVTTLEHYTQIKSIQVEL 483          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: BETB_CHRSD (Betaine aldehyde dehydrogenase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=betB PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 8.485e-14
Identity = 56/206 (27.18%), Postives = 90/206 (43.69%), Query Frame = -1
Query:  237 FSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRREGNLIW-------PLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVINL 830
            F  SGQ CT    V V  S  ++          ++  G P + S +  P+VS      +   +   K++GA          +  W       P +  +   +MR+  EE FGPV+ V+     EE I   N + +GL   VF++ +N+A  +   +E G   IN+     P   P  G+K+SGIG +    ++N  T+ KS  I +
Sbjct:  278 FYSSGQICTNGTRVFVERSAKEAFEAKLVERVARIKAGDPMDPSVNFGPLVSFEHQEKVLSYIALGKEQGARVLAGGDAWNSGEWAKGAWAAPTVFTDCTDEMRVVKEEIFGPVMSVLAFDDEEEVIRRANNTKYGLAAGVFSESLNRAHRVIHQLEAGICWINTW-GESPSEMPVGGYKESGIGRENGVETLNHYTQTKSVQIEM 482          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: IOLA_BACCN (Methylmalonate semialdehyde dehydrogenase [acylating] OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=iolA PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.108e-13
Identity = 55/208 (26.44%), Postives = 86/208 (41.35%), Query Frame = -1
Query:  243 IIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRR------EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVI 845
            +I   F  SG+RC A  VV V++ +AD           KL VG    E   + P++ ES    + G +      GA+   + R+       G  +   + D V  +M+I  +E F PVL ++R+  +EEGI   N S F     ++T     A    D ++ G + +N         F F G K S  G  G      +    +  V+
Sbjct:  274 VIGSAFGSSGERCMACSVVAVLDEIADEFIDALVSETRKLKVGDGFHEENYVGPLIRESHKERVIGYINSGVADGASLLVDGRQIKEDVEGGYFVGATIFDGVNQNMKIWQDEIFAPVLSIVRVRDLEEGIQLTNQSKFANGAVIYTSSGKHAQTFRDHIDAGMIGVNVNVPAPMAFFAFAGNKASFYGDLGTNGKDGVQFYTRKKVV 481          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: BETB_PSEU5 (Betaine aldehyde dehydrogenase OS=Pseudomonas stutzeri (strain A1501) GN=betB PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.108e-13
Identity = 60/211 (28.44%), Postives = 91/211 (43.13%), Query Frame = -1
Query:  237 IKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPPE-ESCDITPVVSESSANFIEGLVMDAKQKGATFC--------QEYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVINL 842
            +   F  SGQ CT    V +   +  S          ++ +G P+ E+ +  P+VS +  + +   +   K  GA            EY R G  + P +  +   DM I  EE FGPVL ++     +E I   N + +GL   V T D+ +A  I   +E G   IN+     P   P  G+K SGIG +    S+   T+VKS  + L
Sbjct:  275 VMANFFSSGQVCTNGTRVFIPAGLKASFEAKLLERVQRVRLGDPQQEATNFGPLVSFAHMDKVLDYIAQGKAAGARILCGGERVTEGEYAR-GAFVAPTIFSDCSDDMSIVREEIFGPVLSLLEYQGEDEAIRRANDTEYGLAAGVVTPDLARAHRIIHRLEAGICWINTW-GESPAQMPVGGYKQSGIGRENGIASLAHYTRVKSVQVEL 483          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: ALDA_STAHJ (Putative aldehyde dehydrogenase aldA OS=Staphylococcus haemolyticus (strain JCSC1435) GN=aldA PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.108e-13
Identity = 58/202 (28.71%), Postives = 94/202 (46.53%), Query Frame = -1
Query:  240 GQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQK--------GATFCQEYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVIN 818
            G+ C+A   +LV  S+ D +          + VG P +E   ++          IE  V  A++         G       R +G    P +++      ++A EE FGPV+ V +     E I   N S +GL G +FT +IN+A+ ++ AM TG + IN+   + P   PF G+K SGIG +   ++I    +VK+  I+
Sbjct:  288 GEVCSAGSRLLVQSSIYDKVMPKLKEAFENIKVGDPFDEDVKMSAQTGPEQLEKIESYVKIAEEDSNANILTGGHRLTDNGRDKGYFFEPTIIEIKDNSHQLAQEEIFGPVVVVEKFEDEAEAIKIANDSEYGLAGGIFTTNINRALNVAKAMRTGRIWINTY-NQFPAGAPFGGYKKSGIGREIYKDAIKNYQQVKNIFID 488          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: ALDA_STAES (Putative aldehyde dehydrogenase aldA OS=Staphylococcus epidermidis (strain ATCC 12228) GN=aldA PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.447e-13
Identity = 57/202 (28.22%), Postives = 95/202 (47.03%), Query Frame = -1
Query:  240 GQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQK--------GATFCQEYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVIN 818
            G+ C+A   +LV  S+ D L          + VG P +E   ++        + IE  +  A++         G         +G    P +++      ++A EE FGPV+ V +    +E I   N S +GL G +FT DI++A+ ++ AM TG + IN+   + P   PF G+K SGIG +   ++I    +VK+  I+
Sbjct:  288 GEVCSAGSRLLVQSSIYDELLPKLKEAFENIKVGDPFDEDTKMSAQTGPEQLDKIESYIKIAEEDDKANILTGGHRITDNGLDKGYFFEPTIIEINDNKHQLAQEEIFGPVVVVEKFDDEQEAIEIANDSEYGLAGGIFTTDIHRALNVAKAMRTGRIWINTY-NQIPAGAPFGGYKKSGIGREVYKDAIKNYQQVKNIFID 488          
The following BLAST results are available for this feature:
BLAST of CV885282 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 339
Match NameE-valueIdentityDescription
BETB_BRUMB6.497e-1426.79Betaine aldehyde dehydrogenase OS=Brucella meliten... [more]
ALDH2_YEAST6.497e-1428.50Aldehyde dehydrogenase [NAD(P)+] 1 OS=Saccharomyce... [more]
ALDA_ECOLI6.497e-1430.17Lactaldehyde dehydrogenase OS=Escherichia coli (st... [more]
GABD1_MYCUA8.485e-1428.36Succinate-semialdehyde dehydrogenase [NADP+] 1 OS=... [more]
BETB_ERWCT8.485e-1426.57Betaine aldehyde dehydrogenase OS=Erwinia carotovo... [more]
BETB_CHRSD8.485e-1427.18Betaine aldehyde dehydrogenase OS=Chromohalobacter... [more]
IOLA_BACCN1.108e-1326.44Methylmalonate semialdehyde dehydrogenase [acylati... [more]
BETB_PSEU51.108e-1328.44Betaine aldehyde dehydrogenase OS=Pseudomonas stut... [more]
ALDA_STAHJ1.108e-1328.71Putative aldehyde dehydrogenase aldA OS=Staphyloco... [more]
ALDA_STAES1.447e-1328.22Putative aldehyde dehydrogenase aldA OS=Staphyloco... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_013G05_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_013_T3_G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885282 ID=CV885282; Name=CV885282; organism=Citrus sinensis; type=EST; length=845bp
GAAACTATTGCGTTCTGTCTCACATATTACATATATGTTGATGCACATAT
CTCCATTATTTATCATCTGCAAAGCGTGAAGTACTAGAAAGGCAGATACA
TAATACAATTCTGCAGATAAAACTCGTCCCTCTTCATCGCTAGTTATTAT
ACCTAAACTAAAATACCGTTCGTTCTTAACTGTTTCCTAATGGCTTAATT
ATACTTGAATTAACCCATGGTATAAGAAGGACTTGGCAAATTGATAACAG
TGCTTTTGACCTTAGTCATCATGTTGATGCTGTTGGTAACACCTTGTGAG
CCAATTCCACTGTCCTTAAAACCCTGGAAAGGAAAATGATCTGGTCCACG
AGCTGGGGCAGAGTTGATCTGGACGGTTCCTGTCTCCATTGCATCGCTGA
TCAACATTGCTTTGTTAATGTCCTTTGTAAATACACAGCCCTGAAGTCCA
AAGTTGCTAGCATTGCAGTGGTGAATACCTTCCTCAACAGAGCCAATCCT
GATAACAGGCAGAACCGGTCCGAATGGCTCCTCCCATGCGATCCTCATAT
CGGGCCTAACATTGTCAAGCAACAAGGGCCAGATGAGGTTGCCTTCTCTC
CTGTACTCTTGACAGAATGTTGCTCCTTTCTGTTTGGCATCCATAACCAG
CCCTTCAATGAAATTTGCAGATGATTCCGACACAACTGGAGTGATATCAC
AGCTTTCTTCAGGAGGGCCAACTGTCAGTTTCACCACTTTAGCCTTAACC
TTCTCGACCAGGGAATCTGCTACAGATTCCATCACCAAGACAACCTTAAC
TGCAGTGCATCTTTGACCACTGTAAGAAAATCCTCCTTTTATTAT
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