CV885282

Overview
NameCV885282
Unique NameCV885282
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length845
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: BETB_XANCP (Betaine aldehyde dehydrogenase OS=Xanthomonas campestris pv. campestris GN=betB PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.730e-12
Identity = 57/206 (27.67%), Postives = 92/206 (44.66%), Query Frame = -1
Query:  237 FSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGAT--FCQEYRREGNL-----IWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVINL 830
            F  SGQ CT    V V  ++  +          ++ +G P +E     P+VS +    +   +   K +GA   F  E  R+G L     + P +  +    M I  EE FGPVL ++     +E I   NA+++GL   V T D+++A  +   +E G   IN+     P   P  G+K SG+G +    ++   T+ KS  + L
Sbjct:  279 FYSSGQVCTNGTRVFVPRALRTAFEARLLARVQRIHIGDPLDERTTFGPMVSAAHMQRVLEHIEQGKAEGARLLFGGERLRDGALAQGCYVAPTIFSDCTDVMTIVREEIFGPVLSLLTYDDEDEAITRANATSYGLAAGVVTPDLSRAHRLIHRLEAGICWINTW-GESPAPMPVGGYKQSGVGRENGLATLQAYTRTKSVQVEL 483          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: GABD2_MYCUA (Putative succinate-semialdehyde dehydrogenase [NADP+] 2 OS=Mycobacterium ulcerans (strain Agy99) GN=gabD2 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.565e-12
Identity = 57/212 (26.89%), Postives = 93/212 (43.87%), Query Frame = -1
Query:  228 FSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPPEE-SCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRRE---GNLIW-PLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINS--APARGPDHFPFQGFKDSGI----GSQGVTNSINMMTKVKSTVINLPSP 830
            FS +GQ C +++ + V + +AD            + +G   + S D+  ++SE     + G V DA  KGA      +     G L + P +L +V  +M  A  E FGP++ +  +  VEE +   N + +GL   V+     +   I+  + +GTV +N   A A G    P  G   SG+    G +G+       T   + V NL  P
Sbjct:  281 FSNAGQLCISIERIYVEKDIADEFTRKFGDAVRSMKLGTAYDFSVDMGSLISEGQLKTVSGHVDDATAKGAKVIAGGKARPDVGPLFYEPTVLTDVTHEMECADNETFGPLVSIYPVADVEEAVEKANDTEYGLNASVWAGSTPEGEKIAARLRSGTVNVNEGYAFAWGSLSAPMGGMGISGVGRRHGPEGLLKYTESQTIATARVFNLDPP 492          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: BETB_VIBSL (Betaine aldehyde dehydrogenase OS=Vibrio splendidus (strain LGP32) GN=betB PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.565e-12
Identity = 54/206 (26.21%), Postives = 92/206 (44.66%), Query Frame = -1
Query:  237 FSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPPEE-SCDITPVVSESSANFIEGLVMDAKQKGATFC-------QEYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVINL 830
            F   G+ CT    V V ES+ +           KL +G P +    I  ++S+   + +   +  AKQ GAT               GN + P +  +   DM    +E FGPV+ V++    ++ I   N + +GL   VFT+++++A  +   M+ G   +N+     P   P  G+K SG+G +    ++   T+ KS +I L
Sbjct:  274 FYTQGEVCTNGTRVYVHESIYNDFIDQLKTRTEKLIIGNPMDMETQIGALISKEHLSKVLEAIELAKQSGATLLTGGYQVTDNGLANGNFVIPTVFTDCHDDMPHVQQEIFGPVMSVLKFTDEDDVIRRANDTQYGLAAGVFTQNLSRAHRVIHQMQAGICWVNTW-GDSPAEMPVGGYKLSGVGRENGPETLLHYTQTKSILIEL 478          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: BETB_PSEAB (Betaine aldehyde dehydrogenase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=betB PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.565e-12
Identity = 55/210 (26.19%), Postives = 88/210 (41.90%), Query Frame = -1
Query:  237 IKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPPE-ESCDITPVVSESSANFIEGLVMDAK-QKGATFCQEYR------REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVINL 842
            +   F  SGQ CT    V +  S              ++ +G P+ E+ +  P+VS      + G +   K QK    C   R        G  + P +  +   DM I  EE FGPV+ ++     +E I   N + +GL   V T+D+ +A      +E G   IN+     P   P  G+K SG+G +    ++   T++KS  + L
Sbjct:  275 VMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGNGAYVAPTVFTDCSDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTW-GESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQVEL 483          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: BETB_PSEA7 (Betaine aldehyde dehydrogenase OS=Pseudomonas aeruginosa (strain PA7) GN=betB PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.565e-12
Identity = 55/210 (26.19%), Postives = 88/210 (41.90%), Query Frame = -1
Query:  237 IKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPPE-ESCDITPVVSESSANFIEGLVMDAK-QKGATFCQEYR------REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVINL 842
            +   F  SGQ CT    V +  S              ++ +G P+ E+ +  P+VS      + G +   K QK    C   R        G  + P +  +   DM I  EE FGPV+ ++     +E I   N + +GL   V T+D+ +A      +E G   IN+     P   P  G+K SG+G +    ++   T++KS  + L
Sbjct:  275 VMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTEGAFGNGAYVAPTVFTDCSDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTW-GESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQVEL 483          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: MMSA_DICDI (Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Dictyostelium discoideum GN=mmsdh PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.656e-12
Identity = 56/208 (26.92%), Postives = 88/208 (42.31%), Query Frame = -1
Query:  240 FSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPPEESCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRR--------EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGS---QGVTNSINMMTKVKSTVIN 830
            F  SGQRC A+   + +    + +             G      D+ PV+S +S   I  L+     +GA    + R         +GN + P +L +V+P MR   EE FGPVL  + + +V++ I   NA+ +G    VFT     A      ++ G V IN         F F G + S +G+    G T  +   T++K+   N
Sbjct:  300 FGASGQRCMALSAAVFVGESKNWIPELAERAKKLKVAGGAAPGADLGPVISAASKQRIHELIQSGIDEGAKCILDGRNVVVDPEFSKGNFVGPTILTDVKPHMRCYKEEIFGPVLVCLNVDTVDQAIQLINANPYGNGTAVFTSSGAVARKYQREIDVGQVGINLPIPVPLPFFSFTGSRGSFVGAGHFYGKT-GVQFFTQIKTITSN 506          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: AMNC_PSESP (2-aminomuconic 6-semialdehyde dehydrogenase OS=Pseudomonas sp. GN=amnC PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.656e-12
Identity = 55/211 (26.07%), Postives = 93/211 (44.08%), Query Frame = -1
Query:  225 FSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPPEES-CDITPVVSESSANFIEGLVMDAKQKGATFCQ--------EYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVINLPSPS 830
            F  SGQ C   + V V   + D            L V  P E+   + P++S    + +      A+Q+GATF          + R  G  + P ++  +  D R+  EE FGP+  V    S  E I   N + +GL   ++T ++++A  +S+ M  G   +N+   R     PF G   SGIG +G  +S+N  +++ +  + +   S
Sbjct:  279 FLNSGQVCLCSERVYVERPIFDRFCVALAERIKALKVDWPHETDTQMGPLISSKHRDKVLSYFELARQEGATFLAGGGVPRFGDERDNGAWVEPTVIAGLSDDARVVREEIFGPICHVTPFDSESEVIRRANDTRYGLAATIWTTNLSRAHRVSELMRVGISWVNTWFLRDL-RTPFGGAGLSGIGREGGMHSLNFYSELTNVCVRIDKES 488          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: AL8A1_BOVIN (Aldehyde dehydrogenase family 8 member A1 OS=Bos taurus GN=ALDH8A1 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.656e-12
Identity = 50/211 (23.70%), Postives = 92/211 (43.60%), Query Frame = -1
Query:  243 IKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVG-PPEESCDITPVVSESSANFIEGLVMDAKQKGATF-CQE---------YRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVI 842
            ++  F+  G+ C     + V  S+                VG P + S D+  ++S++    +   +  A+ +GA   C E           + G  + P ++ +V+ +     EE FGPV  V+   S EE I   N   +GL   V++ ++ +   ++  +++G V  N    R   + PF G K SG+G +G  +S    T+VK+  +
Sbjct:  276 VRSSFANQGEICLCTSRIFVQRSIYSEFLKRFVEAARMWKVGIPSDPSADMGALISKAHLEKVRSYIKKARMEGAQILCGEGVDKLNLPPRNQAGYFMLPTVITDVKDESCCMKEEIFGPVTCVVPFDSEEEVIQRANNVKYGLAATVWSGNVGRVHRVAKKLQSGLVWTNCWLIR-ELNLPFGGMKSSGVGREGAKDSYEFFTEVKTITV 485          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: ROCA_ANOFW (1-pyrroline-5-carboxylate dehydrogenase OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=rocA PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.081e-12
Identity = 53/188 (28.19%), Postives = 84/188 (44.68%), Query Frame = -1
Query:  294 IIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPPEE-SCDITPVVSESSANFIEGLVMDAKQKG--ATFCQEYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQIN-SAPARGPDHFPFQGFKDSGIGSQ 845
            I+   F +SGQ+C+A   V+ +E V D +         +L VG PEE S  + PV+ +S+ N I   +   KQ+G   T  +    +G  I P +  ++ P  RI  EE FGPV+   +    +  +   N + +GL G V + +        +    G +  N         + PF GF  SG  S+
Sbjct:  308 IVASAFGFSGQKCSACSRVVALEDVYDQVLNRVVELTKQLKVGNPEEQSTFMGPVIDQSAYNKIMEYIEIGKQEGKLMTGGEGDDSKGFFIQPTVFADLDPKARIMQEEIFGPVVAFTKAKDFDHALEIANNTEYGLTGAVISNNRFNLEKAREEFHVGNLYFNRGCTGAIVGYHPFGGFNMSGTDSK 495          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: GABD1_MYCLE (Succinate-semialdehyde dehydrogenase [NADP+] OS=Mycobacterium leprae GN=gabD1 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.081e-12
Identity = 55/204 (26.96%), Postives = 87/204 (42.65%), Query Frame = -1
Query:  243 IKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPPEE-SCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRREGNLIW---PLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVI 842
            + G    +GQ C A K  +    + D            L VG P +   D+ P+ +ES    +E  V  A   GA      +R     W   P ++ ++  DM +  +E FGPV  V    ++++ I   NA+ FGL    +T++ ++     D +  G V IN      P+  PF G K SG G +  T+ I     +K+  I
Sbjct:  254 VTGRVQNNGQSCIAAKRFIAHADIYDEFVEKFVARMETLRVGDPTDPDTDVGPLATESGRAQVEQQVDAAAAAGAVIRCGGKRPDRPGWFYPPTVITDITKDMALYTDEVFGPVASVYCATNIDDAIEIANATPFGLGSNAWTQNESEQRHFIDNIVAGQVFINGMTVSYPE-LPFGGIKRSGYGRELSTHGIREFCNIKTVWI 456          
The following BLAST results are available for this feature:
BLAST of CV885282 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 339
Match NameE-valueIdentityDescription
BETB_XANCP2.730e-1227.67Betaine aldehyde dehydrogenase OS=Xanthomonas camp... [more]
GABD2_MYCUA3.565e-1226.89Putative succinate-semialdehyde dehydrogenase [NAD... [more]
BETB_VIBSL3.565e-1226.21Betaine aldehyde dehydrogenase OS=Vibrio splendidu... [more]
BETB_PSEAB3.565e-1226.19Betaine aldehyde dehydrogenase OS=Pseudomonas aeru... [more]
BETB_PSEA73.565e-1226.19Betaine aldehyde dehydrogenase OS=Pseudomonas aeru... [more]
MMSA_DICDI4.656e-1226.92Probable methylmalonate-semialdehyde dehydrogenase... [more]
AMNC_PSESP4.656e-1226.072-aminomuconic 6-semialdehyde dehydrogenase OS=Pse... [more]
AL8A1_BOVIN4.656e-1223.70Aldehyde dehydrogenase family 8 member A1 OS=Bos t... [more]
ROCA_ANOFW6.081e-1228.191-pyrroline-5-carboxylate dehydrogenase OS=Anoxyba... [more]
GABD1_MYCLE6.081e-1226.96Succinate-semialdehyde dehydrogenase [NADP+] OS=My... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_013G05_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_013_T3_G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885282 ID=CV885282; Name=CV885282; organism=Citrus sinensis; type=EST; length=845bp
GAAACTATTGCGTTCTGTCTCACATATTACATATATGTTGATGCACATAT
CTCCATTATTTATCATCTGCAAAGCGTGAAGTACTAGAAAGGCAGATACA
TAATACAATTCTGCAGATAAAACTCGTCCCTCTTCATCGCTAGTTATTAT
ACCTAAACTAAAATACCGTTCGTTCTTAACTGTTTCCTAATGGCTTAATT
ATACTTGAATTAACCCATGGTATAAGAAGGACTTGGCAAATTGATAACAG
TGCTTTTGACCTTAGTCATCATGTTGATGCTGTTGGTAACACCTTGTGAG
CCAATTCCACTGTCCTTAAAACCCTGGAAAGGAAAATGATCTGGTCCACG
AGCTGGGGCAGAGTTGATCTGGACGGTTCCTGTCTCCATTGCATCGCTGA
TCAACATTGCTTTGTTAATGTCCTTTGTAAATACACAGCCCTGAAGTCCA
AAGTTGCTAGCATTGCAGTGGTGAATACCTTCCTCAACAGAGCCAATCCT
GATAACAGGCAGAACCGGTCCGAATGGCTCCTCCCATGCGATCCTCATAT
CGGGCCTAACATTGTCAAGCAACAAGGGCCAGATGAGGTTGCCTTCTCTC
CTGTACTCTTGACAGAATGTTGCTCCTTTCTGTTTGGCATCCATAACCAG
CCCTTCAATGAAATTTGCAGATGATTCCGACACAACTGGAGTGATATCAC
AGCTTTCTTCAGGAGGGCCAACTGTCAGTTTCACCACTTTAGCCTTAACC
TTCTCGACCAGGGAATCTGCTACAGATTCCATCACCAAGACAACCTTAAC
TGCAGTGCATCTTTGACCACTGTAAGAAAATCCTCCTTTTATTAT
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