CV885282

Overview
NameCV885282
Unique NameCV885282
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length845
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: AL221_ARATH (Aldehyde dehydrogenase 22A1 OS=Arabidopsis thaliana GN=ALDH22A1 PE=2 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 6.081e-12
Identity = 57/209 (27.27%), Postives = 89/209 (42.58%), Query Frame = -1
Query:  246 IKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPPEES-CDITPVVSESSANFIEGLVMDAKQKGATFCQEYRREGNL--------IWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINS-APARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTV 842
            ++G    SGQ C   +   V + +  +           ++ GPP     D+  +  +  +  ++ LV DA  KGA         G+L          P +L NV  +M+I  EE FGP++P+++  + EE I   N S + L   VF+   ++A  I+  ++ G   IN  A        PF G KDSG G       +     VKS V
Sbjct:  321 VRGTLQSSGQNCAGAERFYVHKDIYTAFIGQVTKIVKSVSAGPPLTGRYDMGAICLQEHSEHLQSLVNDALDKGAEIAVR-GSFGHLGEDAVDQYFPPTVLINVNHNMKIMKEEAFGPIMPIMQFSTDEEVIKLANDSRYALGCAVFSGSKHRAKQIASQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGIEGLRACCLVKSVV 528          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: XYLG_PSEPU (2-hydroxymuconic semialdehyde dehydrogenase OS=Pseudomonas putida GN=xylG PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.942e-12
Identity = 51/211 (24.17%), Postives = 88/211 (41.71%), Query Frame = -1
Query:  237 IKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPPEE-SCDITPVVSESSANFIEGLVMDAKQKGATFCQ--------EYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVINL 842
            ++  F+  GQ C   + V V   + D+           L +G P +   +  P++S      +      A   GAT            +   G  + P +   +  D  +  EE FGP   +    S EE I   N+  +GL   ++T+++ +A  ++  +E G V +NS   R      F G K SGIG +G  +S+   T++K+  + L
Sbjct:  277 LRSAFANCGQVCLGTERVYVERPIFDAFVARLKAGAEALKIGEPNDPEANFGPLISHKPREKVPSYYQQAVDDGATVVTGGGVPEMPAHLAGGAWVQPTIWTGLADDSAVVTEEIFGPCCHIRPFDSEEEAIELANSLPYGLASAIWTENVRRAHRVAGQIEAGIVWVNSWFLRDL-RTAFGGSKQSGIGREGGVHSLEFYTELKNICVKL 486          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: ROCA_BACLD (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=rocA PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.942e-12
Identity = 52/189 (27.51%), Postives = 85/189 (44.97%), Query Frame = -1
Query:  294 IIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPPEESCDIT--PVVSESSANFIEGLVMDAKQKGATFC--QEYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQIN-SAPARGPDHFPFQGFKDSGIGSQ 845
            I    F ++GQ+C+A    +V E V D +            VG P+ S D+   PV+ ++S N I   +   K++G      +    +G  I P +  ++ P  R+  EE FGPV+   ++ S +E +   N + +GL G V TK+ +           G +  N +       + PF GFK SG  S+
Sbjct:  309 IFTSAFGFAGQKCSAGSRAVVHEKVYDEVLKRVIEITESKKVGEPD-SADVYMGPVIDQASFNKIMDYIEIGKEEGRLVSGGKGDDSKGYFIEPTIFADLDPKARLMQEEIFGPVVAFSKVSSFDEALEVANNTEYGLTGAVITKNRDHINRAKQEFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSK 496          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: BETB_XANCB (Betaine aldehyde dehydrogenase OS=Xanthomonas campestris pv. campestris (strain B100) GN=betB PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.942e-12
Identity = 56/206 (27.18%), Postives = 91/206 (44.17%), Query Frame = -1
Query:  237 FSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFC--QEYRREGNL-----IWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVINL 830
            F  SGQ CT    V V  ++  +          ++ +G P +E     P+VS +    +   +   K +GA      E  R+G L     + P +  +    M I  EE FGPVL ++     +E I   NA+++GL   V T D+++A  +   +E G   IN+     P   P  G+K SG+G +    ++   T+ KS  + L
Sbjct:  279 FYSSGQVCTNGTRVFVPRALRTAFEARLLARVQRIHIGDPLDERTTFGPMVSAAHMQRVLEHIEQGKAEGARLLCGGERLRDGALAQGCYVAPTIFSDCTDVMTIVREEIFGPVLSLLTYDDEDEAITRANATSYGLAAGVVTPDLSRAHRLIHRLEAGICWINTW-GESPAPMPVGGYKQSGVGRENGLATLQAYTRTKSVQVEL 483          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: BETB_XANC8 (Betaine aldehyde dehydrogenase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=betB PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.942e-12
Identity = 56/206 (27.18%), Postives = 91/206 (44.17%), Query Frame = -1
Query:  237 FSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFC--QEYRREGNL-----IWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVINL 830
            F  SGQ CT    V V  ++  +          ++ +G P +E     P+VS +    +   +   K +GA      E  R+G L     + P +  +    M I  EE FGPVL ++     +E I   NA+++GL   V T D+++A  +   +E G   IN+     P   P  G+K SG+G +    ++   T+ KS  + L
Sbjct:  279 FYSSGQVCTNGTRVFVPRALRTAFEARLLARVQRIHIGDPLDERTTFGPMVSAAHMQRVLEHIEQGKAEGARLLCGGERLRDGALAQGCYVAPTIFSDCTDVMTIVREEIFGPVLSLLTYDDEDEAITRANATSYGLAAGVVTPDLSRAHRLIHRLEAGICWINTW-GESPAPMPVGGYKQSGVGRENGLATLQAYTRTKSVQVEL 483          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: BETB_BACSU (Betaine aldehyde dehydrogenase OS=Bacillus subtilis GN=gbsA PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.942e-12
Identity = 59/205 (28.78%), Postives = 89/205 (43.41%), Query Frame = -1
Query:  240 FSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRR-------EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVIN 830
            F ++GQ C+A   +LV +++ D           ++ +G       +  P++S      +E  V    ++GA      +R        G    P +  N   DMRI  EE FGPVL V    S EE I   N + +GL G V++KDI K   ++  +  GTV IN          P+ G+K SG G +     +   T+VK    N
Sbjct:  276 FFHAGQVCSAGSRLLVEDAIHDQFLAELVKRAKRIKLGNGFHAETESGPLISAEHRAKVEKYVEIGIEEGAKLETGGKRPEDPELQNGFFYEPTIFSNCNSDMRIVQEEVFGPVLTVETFSSEEEVIELANDTIYGLAGAVWSKDIEKCERVAARLRMGTVWINDFHPYFA-QAPWGGYKQSGFGRELGKIGLEEYTEVKHVYRN 479          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: ROCA_OCEIH (1-pyrroline-5-carboxylate dehydrogenase OS=Oceanobacillus iheyensis GN=rocA PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.037e-11
Identity = 52/188 (27.66%), Postives = 85/188 (45.21%), Query Frame = -1
Query:  294 IIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVG-PPEESCDITPVVSESSANFIEGLVMDAKQKGATFC--QEYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQIN-SAPARGPDHFPFQGFKDSGIGSQ 845
            I+   F +SGQ+C+A    ++ ESV D +          LTVG P E++  +  VV++   + I+  +   KQ+G      +    +G  + P +  ++ P  RI  EE FGPV+   +  S +E +   N + +GL G V + +             G +  N    A    + PF GFK SG  S+
Sbjct:  308 IVHSAFGFSGQKCSACSRAVIHESVYDEVIEKSVELAKTLTVGNPTEDNVYMASVVNQKQFDKIKDYIEVGKQEGELVFGGETDDNKGFFVHPTIFKDLDPKARIMQEEIFGPVVAFSKAKSFDELLDIANNTEYGLTGAVISNNRENLNRAQTEFLVGNLYFNRGCTAAIVGYQPFGGFKMSGTDSK 495          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: BETB_SERP5 (Betaine aldehyde dehydrogenase OS=Serratia proteamaculans (strain 568) GN=betB PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.037e-11
Identity = 53/206 (25.73%), Postives = 87/206 (42.23%), Query Frame = -1
Query:  237 FSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPPEE-SCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRR-------EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVINL 830
            F  SGQ CT    V V  ++             ++ +G P +   +  P+VS +    +   +   K  GA       R       +G  + P +  + R +M I  EE FGPV+ ++   S EE +   N + FGL   V T D+ +A  +   +E G   IN+         P  G+K SG+G +    ++   T++KS  + L
Sbjct:  279 FYSSGQVCTNGTRVFVPAALQAQFEAKILERVKRIRLGDPTDPQTNFGPLVSFAHMESVLRFIESGKNSGARLLCGGERVTEGEFAKGAYVAPTVFTDCRDEMEIVREEIFGPVMSILSYQSEEEVVRRANDTTFGLAAGVVTNDLTRAHRVIHQLEAGICWINTW-GESAAEMPVGGYKQSGVGRENGLMTLEHYTQIKSVQVEL 483          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: ROCA_STAAW (1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus aureus (strain MW2) GN=rocA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.355e-11
Identity = 45/183 (24.59%), Postives = 87/183 (47.54%), Query Frame = -1
Query:  306 IIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPPEESCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRRE--GNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQIN-SAPARGPDHFPFQGFKDSG 845
            I+   F +SGQ+C+A    +V + V D +         +LT+G   ++  + PV+++   + I+  +   K++G         +  G  + P ++  ++   RI  EE FGPV+  +++   +E I   N +++GL G V T +    +   +  + G + +N    +    + PF GFK SG
Sbjct:  308 IVTSAFGFSGQKCSACSRAIVHKDVYDEVLEKSIKLTKELTLGNTVDNTYMGPVINKKQFDKIKNYIEIGKEEGKLEQGGGTDDSKGYFVEPTIISGLKSKDRIMQEEIFGPVVGFVKVNDFDEAIEVANDTDYGLTGAVITNNREHWIKAVNEFDVGNLYLNRGCTSAVVGYHPFGGFKMSG 490          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: ROCA_STAAT (1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=rocA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.355e-11
Identity = 45/183 (24.59%), Postives = 87/183 (47.54%), Query Frame = -1
Query:  306 IIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPPEESCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRRE--GNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQIN-SAPARGPDHFPFQGFKDSG 845
            I+   F +SGQ+C+A    +V + V D +         +LT+G   ++  + PV+++   + I+  +   K++G         +  G  + P ++  ++   RI  EE FGPV+  +++   +E I   N +++GL G V T +    +   +  + G + +N    +    + PF GFK SG
Sbjct:  308 IVTSAFGFSGQKCSACSRAIVHKDVYDEVLEKSIKLTKELTLGNTVDNTYMGPVINKKQFDKIKNYIEIGKEEGKLEQGGGTDDSKGYFVEPTIISGLKSKDRIMQEEIFGPVVGFVKVNDFDEAIEVANDTDYGLTGAVITNNREHWIKAVNEFDVGNLYLNRGCTSAVVGYHPFGGFKMSG 490          
The following BLAST results are available for this feature:
BLAST of CV885282 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 339
Match NameE-valueIdentityDescription
AL221_ARATH6.081e-1227.27Aldehyde dehydrogenase 22A1 OS=Arabidopsis thalian... [more]
XYLG_PSEPU7.942e-1224.172-hydroxymuconic semialdehyde dehydrogenase OS=Pse... [more]
ROCA_BACLD7.942e-1227.511-pyrroline-5-carboxylate dehydrogenase OS=Bacillu... [more]
BETB_XANCB7.942e-1227.18Betaine aldehyde dehydrogenase OS=Xanthomonas camp... [more]
BETB_XANC87.942e-1227.18Betaine aldehyde dehydrogenase OS=Xanthomonas camp... [more]
BETB_BACSU7.942e-1228.78Betaine aldehyde dehydrogenase OS=Bacillus subtili... [more]
ROCA_OCEIH1.037e-1127.661-pyrroline-5-carboxylate dehydrogenase OS=Oceanob... [more]
BETB_SERP51.037e-1125.73Betaine aldehyde dehydrogenase OS=Serratia proteam... [more]
ROCA_STAAW1.355e-1124.591-pyrroline-5-carboxylate dehydrogenase OS=Staphyl... [more]
ROCA_STAAT1.355e-1124.591-pyrroline-5-carboxylate dehydrogenase OS=Staphyl... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_013G05_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_013_T3_G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885282 ID=CV885282; Name=CV885282; organism=Citrus sinensis; type=EST; length=845bp
GAAACTATTGCGTTCTGTCTCACATATTACATATATGTTGATGCACATAT
CTCCATTATTTATCATCTGCAAAGCGTGAAGTACTAGAAAGGCAGATACA
TAATACAATTCTGCAGATAAAACTCGTCCCTCTTCATCGCTAGTTATTAT
ACCTAAACTAAAATACCGTTCGTTCTTAACTGTTTCCTAATGGCTTAATT
ATACTTGAATTAACCCATGGTATAAGAAGGACTTGGCAAATTGATAACAG
TGCTTTTGACCTTAGTCATCATGTTGATGCTGTTGGTAACACCTTGTGAG
CCAATTCCACTGTCCTTAAAACCCTGGAAAGGAAAATGATCTGGTCCACG
AGCTGGGGCAGAGTTGATCTGGACGGTTCCTGTCTCCATTGCATCGCTGA
TCAACATTGCTTTGTTAATGTCCTTTGTAAATACACAGCCCTGAAGTCCA
AAGTTGCTAGCATTGCAGTGGTGAATACCTTCCTCAACAGAGCCAATCCT
GATAACAGGCAGAACCGGTCCGAATGGCTCCTCCCATGCGATCCTCATAT
CGGGCCTAACATTGTCAAGCAACAAGGGCCAGATGAGGTTGCCTTCTCTC
CTGTACTCTTGACAGAATGTTGCTCCTTTCTGTTTGGCATCCATAACCAG
CCCTTCAATGAAATTTGCAGATGATTCCGACACAACTGGAGTGATATCAC
AGCTTTCTTCAGGAGGGCCAACTGTCAGTTTCACCACTTTAGCCTTAACC
TTCTCGACCAGGGAATCTGCTACAGATTCCATCACCAAGACAACCTTAAC
TGCAGTGCATCTTTGACCACTGTAAGAAAATCCTCCTTTTATTAT
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