CV885282

Overview
NameCV885282
Unique NameCV885282
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length845
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: ROCA_GEOTN (1-pyrroline-5-carboxylate dehydrogenase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=rocA PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.018e-11
Identity = 50/188 (26.60%), Postives = 84/188 (44.68%), Query Frame = -1
Query:  294 IIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGA--TFCQEYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQIN-SAPARGPDHFPFQGFKDSGIGSQ 845
            I+   F +SGQ+C+A    +++E V D +         +L VG P E++  + PV+ + + N I   +   KQ+G   T  +    +G  I P +  +V P+ RI  EE FGPV+   +    +  +   N + +GL G V +++             G +  N         + PF GF  SG  S+
Sbjct:  308 IVASAFGFSGQKCSACSRAIIVEDVYDQVLNRVVELTKQLNVGDPAEQATFMGPVIDQGAYNKIMEYIEIGKQEGRLMTGGEGDDSKGFFIQPTVFADVDPNARIMQEEIFGPVVAFAKARDFDHALEIANNTQYGLTGAVISRNRANLEKARHEFHVGNLYFNRGCTGAIVGYQPFGGFNMSGTDSK 495          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: BETB_XANC5 (Betaine aldehyde dehydrogenase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=betB PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.941e-11
Identity = 53/206 (25.73%), Postives = 87/206 (42.23%), Query Frame = -1
Query:  237 FSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRR-------EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVINL 830
            F  SGQ CT    V V  ++  +          ++ +G P +E     P+VS +    +   +   K +GA       R       +G  + P +  +    M I  EE FGPVL ++     +E +   NA+ +GL   V T D+ +A  +   +E G   +N+     P   P  G+K SG+G +    ++   T+ KS  I L
Sbjct:  279 FYSSGQVCTNGTRVFVPRALRHAFEARLLARVQRIHIGDPLDERTTFGPLVSAAHMQRVLEHIEQGKAEGARLLCGGERLQDGALAQGYYVAPTIFSDCTDVMTIVREEIFGPVLSLLTYDDEDEAVTRANATTYGLAAGVVTPDLARAHRLIHRLEAGICWVNTW-GESPAPMPVGGYKQSGVGRENGLATLQAYTRTKSVQIEL 483          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: ALDH_VIBCH (Aldehyde dehydrogenase OS=Vibrio cholerae GN=aldA PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.941e-11
Identity = 57/206 (27.67%), Postives = 90/206 (43.69%), Query Frame = -1
Query:  240 FSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFC--------QEYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVIN 830
            F   G+ CT    +LV ES+ +            +  G P +    I   VS+   + I G +   K +GA           + Y   G  I P L       M I  EE FGPV+ + +     E +H  N + +GL   V+T+DIN A  ++  ++ G V +N   A  P H  F G+K SGIG +    +++    +K+ +I+
Sbjct:  294 FFNQGEVCTCPSRILVHESIYEKFIAKIIERVALIKQGNPLDTETQIGAQVSKEQYDKILGYIQIGKDEGAELIFGGHPNNQENYLSGGYYIKPTLFFG-HNQMHIFQEEIFGPVIAITKFKDEIEALHLANDTVYGLGAGVWTRDINIAHRMAKNIKAGRVWVNCYHAY-PAHAAFGGYKKSGIGRETHKLTLSHYQNIKNVLIS 497          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: ALDH_VIBC3 (Aldehyde dehydrogenase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=aldA PE=3 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 3.941e-11
Identity = 57/206 (27.67%), Postives = 90/206 (43.69%), Query Frame = -1
Query:  240 FSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFC--------QEYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVIN 830
            F   G+ CT    +LV ES+ +            +  G P +    I   VS+   + I G +   K +GA           + Y   G  I P L       M I  EE FGPV+ + +     E +H  N + +GL   V+T+DIN A  ++  ++ G V +N   A  P H  F G+K SGIG +    +++    +K+ +I+
Sbjct:  294 FFNQGEVCTCPSRILVHESIYEKFIAKIIERVALIKQGNPLDTETQIGAQVSKEQYDKILGYIQIGKDEGAELIFGGHPNNQENYLSGGYYIKPTLFFG-HNQMHIFQEEIFGPVIAITKFKDEIEALHLANDTVYGLGAGVWTRDINIAHRMAKNIKAGRVWVNCYHAY-PAHAAFGGYKKSGIGRETHKLTLSHYQNIKNVLIS 497          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: ALDH_PSEOL (Aldehyde dehydrogenase OS=Pseudomonas oleovorans GN=alkH PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.941e-11
Identity = 57/189 (30.16%), Postives = 83/189 (43.92%), Query Frame = -1
Query:  297 IIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKL---TVGPPEESCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRREGN--LIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARG-PDHFPFQGFKDSGIGS 845
            I+ G FS +GQ C A   V V   +A            ++          S D   +V++   N I  L+ DAK KGA   Q  + +    L+ P +L NV   M I  EE FGP+LP+I    ++  I   N  +  L   VF++D      I     +G+V +N +       + PF G  +SGIGS
Sbjct:  248 IVWGKFSNNGQTCIAPDHVFVHRCIAQKFNEILVKEIVRVYGKDFAAQRRSADYCRIVNDQHFNRINKLLTDAKAKGAKILQGGQVDATERLVVPTVLSNVTAAMDINHEEIFGPLLPIIEYDDIDSVIKRVNDGDKPLALYVFSEDKQFVNNIVARTSSGSVGVNLSVVHFLHPNLPFGGVNNSGIGS 436          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: AL8A1_DANRE (Aldehyde dehydrogenase family 8 member A1 OS=Danio rerio GN=aldh8a1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.941e-11
Identity = 54/211 (25.59%), Postives = 88/211 (41.71%), Query Frame = -1
Query:  243 IKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPPEE-SCDITPVVSESSANFIEGLVMDAKQKGA-TFCQE---------YRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVI 842
            ++  FS  G+ C     + V  SV             +   G P + S D   ++S+     ++G +  A  +GA   C E             G  + P ++  V+    +  EE FGPV  V      EE I   N   +GL   V+++D+ +   ++  ++ G V  N    R   + PF G K SGIG +G  +S +  T+VKS  +
Sbjct:  276 VRSSFSNQGEICLCTSRIFVERSVYPEFLTRFVEATRRWKTGVPSDPSNDNGALISKEHLQKVKGYITLALAEGAQVHCGEGVDKLALPQQNIGGYFMLPTIISGVKDSSALMQEEIFGPVTCVTPFDEEEEVISRANNVRYGLSATVWSRDVGRVHRVARKLQAGLVWTNCWLVRDL-NLPFGGMKHSGIGREGGKDSYHFFTEVKSVTV 485          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: MMSA_ARATH (Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Arabidopsis thaliana GN=ALDH6B2 PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 5.148e-11
Identity = 59/210 (28.10%), Postives = 88/210 (41.90%), Query Frame = -1
Query:  252 IIKGGFSYSGQRCTAVKVVLVM---ESVADSLXXXXXXXXXKLTVGPPEESCDITPVVSESSANFIEGLVMDAKQKGATFCQEYR-------REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTN--SINMMTKVKS 845
            ++  GF  +GQRC A+  V+ +   +S  D L          +T G  E   D+ PV+S+ +   I  L+      GA    + R        +GN I P +L  V PDM    EE FGPVL  ++  S +E I   N + +G    +FT     A      +E G + IN         F F G K S  G         ++  T++K+
Sbjct:  379 LLAAGFGAAGQRCMALSTVVFVGDAKSWEDKLVERAKALK--VTCGS-EPDADLGPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYEKGNFIGPTILSGVTPDMECYKEEIFGPVLVCMQANSFDEAISIINKNKYGNGAAIFTSSGAAARKFQMDIEAGQIGINVPIPVPLPFFSFTGNKASFAGDLNFYGKAGVDFFTQIKT 585          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: AL8A1_HUMAN (Aldehyde dehydrogenase family 8 member A1 OS=Homo sapiens GN=ALDH8A1 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.723e-11
Identity = 50/211 (23.70%), Postives = 93/211 (44.08%), Query Frame = -1
Query:  243 IKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPPEESC-DITPVVSESSANFIEGLVMDAKQKGAT-FCQE---------YRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVI 842
            ++  F+  G+ C     + V +S+             K  VG P +    I  ++S++    +   V  A  +GA  +C E           + G  + P ++ +++ +     EE FGPV  V+   S EE I   N   +GL   V++ ++ +   ++  +++G V  N    R   + PF G K SGIG +G  +S +  T++K+  +
Sbjct:  276 VRSSFANQGEICLCTSRIFVQKSIYSEFLKRFVEATRKWKVGIPSDPLVSIGALISKAHLEKVRSYVKRALAEGAQIWCGEGVDKLSLPARNQAGYFMLPTVITDIKDESCCMTEEIFGPVTCVVPFDSEEEVIERANNVKYGLAATVWSSNVGRVHRVAKKLQSGLVWTNCWLIR-ELNLPFGGMKSSGIGREGAKDSYDFFTEIKTITV 485          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: YNEI_ECOLI (Aldehyde dehydrogenase-like protein yneI OS=Escherichia coli (strain K12) GN=yneI PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 8.781e-11
Identity = 56/207 (27.05%), Postives = 85/207 (41.06%), Query Frame = -1
Query:  246 IKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFC---QEYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQ----GVTNSINMMTKVKSTV 842
            + G +  +GQ C A K  ++ E +A +           L +G P +E   + P+      + +   V     +GA      ++    GN   P +L NV P+M    EE FGPV  +      E  +   N S FGL   +FT D  +A  ++  +E G V IN   A       F G K SG G +    G+    N+ T  K  +
Sbjct:  257 VAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDPRDEENALGPMARFDLRDELHHQVEKTLAQGARLLLGGEKMAGAGNYYPPTVLANVTPEMTAFREEMFGPVAAITIAKDAEHALELANDSEFGLSATIFTTDETQARQMAARLECGGVFINGYCA-SDARVAFGGVKKSGFGRELSHFGLHEFCNIQTVWKDRI 462          
The following BLAST results are available for this feature:
BLAST of CV885282 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 339
Match NameE-valueIdentityDescription
ROCA_GEOTN3.018e-1126.601-pyrroline-5-carboxylate dehydrogenase OS=Geobaci... [more]
BETB_XANC53.941e-1125.73Betaine aldehyde dehydrogenase OS=Xanthomonas camp... [more]
ALDH_VIBCH3.941e-1127.67Aldehyde dehydrogenase OS=Vibrio cholerae GN=aldA ... [more]
ALDH_VIBC33.941e-1127.67Aldehyde dehydrogenase OS=Vibrio cholerae serotype... [more]
ALDH_PSEOL3.941e-1130.16Aldehyde dehydrogenase OS=Pseudomonas oleovorans G... [more]
AL8A1_DANRE3.941e-1125.59Aldehyde dehydrogenase family 8 member A1 OS=Danio... [more]
MMSA_ARATH5.148e-1128.10Methylmalonate-semialdehyde dehydrogenase [acylati... [more]
AL8A1_HUMAN6.723e-1123.70Aldehyde dehydrogenase family 8 member A1 OS=Homo ... [more]
YNEI_ECOLI8.781e-1127.05Aldehyde dehydrogenase-like protein yneI OS=Escher... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_013G05_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_013_T3_G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885282 ID=CV885282; Name=CV885282; organism=Citrus sinensis; type=EST; length=845bp
GAAACTATTGCGTTCTGTCTCACATATTACATATATGTTGATGCACATAT
CTCCATTATTTATCATCTGCAAAGCGTGAAGTACTAGAAAGGCAGATACA
TAATACAATTCTGCAGATAAAACTCGTCCCTCTTCATCGCTAGTTATTAT
ACCTAAACTAAAATACCGTTCGTTCTTAACTGTTTCCTAATGGCTTAATT
ATACTTGAATTAACCCATGGTATAAGAAGGACTTGGCAAATTGATAACAG
TGCTTTTGACCTTAGTCATCATGTTGATGCTGTTGGTAACACCTTGTGAG
CCAATTCCACTGTCCTTAAAACCCTGGAAAGGAAAATGATCTGGTCCACG
AGCTGGGGCAGAGTTGATCTGGACGGTTCCTGTCTCCATTGCATCGCTGA
TCAACATTGCTTTGTTAATGTCCTTTGTAAATACACAGCCCTGAAGTCCA
AAGTTGCTAGCATTGCAGTGGTGAATACCTTCCTCAACAGAGCCAATCCT
GATAACAGGCAGAACCGGTCCGAATGGCTCCTCCCATGCGATCCTCATAT
CGGGCCTAACATTGTCAAGCAACAAGGGCCAGATGAGGTTGCCTTCTCTC
CTGTACTCTTGACAGAATGTTGCTCCTTTCTGTTTGGCATCCATAACCAG
CCCTTCAATGAAATTTGCAGATGATTCCGACACAACTGGAGTGATATCAC
AGCTTTCTTCAGGAGGGCCAACTGTCAGTTTCACCACTTTAGCCTTAACC
TTCTCGACCAGGGAATCTGCTACAGATTCCATCACCAAGACAACCTTAAC
TGCAGTGCATCTTTGACCACTGTAAGAAAATCCTCCTTTTATTAT
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