CV885282

Overview
NameCV885282
Unique NameCV885282
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length845
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: AL1A3_MOUSE (Aldehyde dehydrogenase family 1 member A3 OS=Mus musculus GN=Aldh1a3 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.011e-19
Identity = 71/205 (34.63%), Postives = 105/205 (51.22%), Query Frame = -1
Query:  237 KGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATF-CQEYRRE--GNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVINL 839
            +G F   GQ CTA   V V E V             K  VG P +   +  P + +   + I  L+   K++GA   C     E  G  I P +  +V  +MRIA EE FGPV P+++  ++EE I   N++++GL   VFTK+++KA+ ++ A+E+GTV IN   A      PF GFK SG G +    ++   T+VK+  I L
Sbjct:  304 QGVFFNQGQCCTAASRVFVEEQVYGEFVRRSVEFAKKRPVGDPFDAKTEQGPQIDQKQFDKILELIESGKKEGAKLECGGSAMEDRGLFIKPTVFSDVTDNMRIAKEEIFGPVQPILKFKNLEEVIKRANSTDYGLTAAVFTKNLDKALKLAAALESGTVWINCYNAFYA-QAPFGGFKMSGNGRELGEYALAEYTEVKTVTIKL 507          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: ALDH2_HUMAN (Aldehyde dehydrogenase, mitochondrial OS=Homo sapiens GN=ALDH2 PE=1 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 3.932e-19
Identity = 65/203 (32.02%), Postives = 95/203 (46.80%), Query Frame = -1
Query:  234 FSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPPEES-CDITPVVSESSANFIEGLVMDAKQKGATFCQE---YRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVINLP 830
            F   GQ C A     V E + D              VG P +S  +  P V E+    I G +   KQ+GA            G  I P +  +V+  M IA EE FGPV+ +++  ++EE +   N S +GL   VFTKD++KA  +S A++ GTV +N     G    PF G+K SG G +     +   T+VK+  + +P
Sbjct:  312 FFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQS-PFGGYKMSGSGRELGEYGLQAYTEVKTVTVKVP 513          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: BETB_RHILW (Betaine aldehyde dehydrogenase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=betB PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.136e-19
Identity = 64/207 (30.92%), Postives = 97/207 (46.86%), Query Frame = -1
Query:  237 GGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFC------QEYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVINL 836
            G F  +GQ C+    V V + +              + +G P +E+  I P+VS +    +   +   K +GAT             EG  I P +  +V  DM IA EE FGPV+ V+     +E I   NAS FGL G VFT D+++A  + D +E GT+ IN A    P   PF G K SG G +    ++   +++K+  + +
Sbjct:  275 GNFYSTGQVCSNGTRVFVQKGIKTEFLKRLKARTEAMLIGDPLDEATQIGPMVSWAQREKVVAYIEKGKAEGATLVAGGGIPNNVSGEGYYIQPTVFADVTDDMTIAREEIFGPVMSVLDFDDEDEVIARANASEFGLSGGVFTADLSRAHRVVDRLEAGTLWIN-AYNLAPVEIPFGGSKQSGFGRENSLAALEHYSELKTVYVGM 480          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: ALDH2_PONAB (Aldehyde dehydrogenase, mitochondrial OS=Pongo abelii GN=ALDH2 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.136e-19
Identity = 65/203 (32.02%), Postives = 95/203 (46.80%), Query Frame = -1
Query:  234 FSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPPEES-CDITPVVSESSANFIEGLVMDAKQKGATFCQE---YRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVINLP 830
            F   GQ C A     V E + D              VG P +S  +  P V E+    I G +   KQ+GA            G  I P +  +V+  M IA EE FGPV+ +++  ++EE +   N S +GL   VFTKD++KA  +S A++ GTV +N     G    PF G+K SG G +     +   T+VK+  + +P
Sbjct:  312 FFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYNVFGAQS-PFGGYKMSGSGRELGEYGLQAYTEVKTVTVKVP 513          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: ALDH2_HORSE (Aldehyde dehydrogenase, mitochondrial OS=Equus caballus GN=ALDH2 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.136e-19
Identity = 66/203 (32.51%), Postives = 95/203 (46.80%), Query Frame = -1
Query:  234 FSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPPEES-CDITPVVSESSANFIEGLVMDAKQKGATFC---QEYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVINLP 830
            F   GQ C A     V E V                VG P +S  +  P V E+  N + G +   K++GA            G  I P +  +V+  M IA EE FGPV+ +++  ++EE +   N S +GL   VFTKD++KA  +S A++ GTV IN     G    PF G+K SG G +     +   T+VK+  I +P
Sbjct:  295 FFNQGQCCGAGSRTFVQEDVYAEFVERSVARAKSRVVGNPFDSQTEQGPQVDETQFNKVLGYIKSGKEEGAKLLCGGGAAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSKYGLAAAVFTKDLDKANYLSQALQAGTVWINCYDVFGAQS-PFGGYKMSGNGRELGEYGLQAYTEVKTVTIKVP 496          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: BETB_RHIL3 (Betaine aldehyde dehydrogenase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=betB PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.708e-19
Identity = 62/207 (29.95%), Postives = 99/207 (47.83%), Query Frame = -1
Query:  237 GGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFC------QEYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVINL 836
            G F  +GQ C+    V V +++ D            + +G P +E+  + P+VS +    +   +   K +GAT             EG  + P +  +V  DM IA EE FGPV+ V+   + +E I   NAS FGL G VFT D+ +A  + D +E GT+ IN+     P   PF G K SG G +    ++   +++K+  + +
Sbjct:  275 GNFYSTGQVCSNGTRVFVQKTIKDEFLKRLKVRTEAMLIGDPMDEATQVGPMVSWAQREKVISYIEKGKAEGATLIAGGGIPNNVSGEGYYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDAEDEVIARANASEFGLSGGVFTADLTRAHRVVDRLEAGTLWINTYNL-CPVEIPFGGSKQSGFGRENSLAALEHYSELKTVYVGM 480          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: YLX7_SCHPO (Putative aldehyde dehydrogenase-like protein C922.07c OS=Schizosaccharomyces pombe GN=SPAC922.07c PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 8.760e-19
Identity = 64/200 (32.00%), Postives = 101/200 (50.50%), Query Frame = -1
Query:  240 SGQRCTAVKVVLVMESVADS-LXXXXXXXXXKLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFCQEYR----REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVIN 821
            SGQ CT+   + V +SV D  +            VG P +++  + PVV+++  N I+  +   K++GA           ++G  I P +  +   +M I  EE FGPV+ + +  + +E I   N + +GL    FTKD+ +A  +SD +E G V INS         PF G K SGIG++  +N I M T++K+  IN
Sbjct:  293 SGQICTSNSRIYVQDSVYDKFIELFKKHVIQDYIVGMPFDDNTVVGPVVNKTQYNRIKNYIEQGKKEGAKLVLGDEPLPLKQGYFISPTIFADCSENMTIVKEEIFGPVVAISKFKTEDEAIEKANNTTYGLAAMCFTKDLERAHRVSDELEAGMVFINST-ENSDIQAPFGGIKMSGIGNELGSNGIEMYTQIKAVHIN 491          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: IOLA2_BACWK (Methylmalonate semialdehyde dehydrogenase [acylating] 2 OS=Bacillus weihenstephanensis (strain KBAB4) GN=iolA2 PE=3 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 8.760e-19
Identity = 57/189 (30.16%), Postives = 87/189 (46.03%), Query Frame = -1
Query:  300 IIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRRE------GNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIG 845
            I    F  +G+RC A  VV+V E VAD L          +T+G   EE   + PV+ E       G +    ++GAT  ++ R +      G  + P + DNV  +M+I  +E F PVL ++R+  + E IH  NAS F    C++T          + ++ G + +N         FPF G+K S  G
Sbjct:  272 ITSAAFGSAGERCMAAAVVVVEEDVADELVNRLLQEANAITIGNGLEEGVFLGPVIREGHKERTLGYIQSGVEQGATLIRDGREDDIANSQGYFVGPTIFDNVTQEMKIWQDEIFAPVLSIVRVKDLMEAIHVANASPFANGACLYTNSAKAIREFREEIDAGMLGVNLGVPAPMAFFPFSGYKKSFYG 460          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: BETB_RHISN (Betaine aldehyde dehydrogenase OS=Rhizobium sp. (strain NGR234) GN=betB PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 8.760e-19
Identity = 60/207 (28.99%), Postives = 97/207 (46.86%), Query Frame = -1
Query:  237 GGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFC------QEYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVINL 836
            G F  +GQ C+    V V   + D+           + +G P +E+  + P+VS++  + +   +   K +GA              EG  I P +  +V  +M IA EE FGPV+ V+      E +   NA+ FGL   VFT D+ +A  + D +E GT+ IN+     P   PF G K SG G +    ++N  T++K+  + +
Sbjct:  275 GNFYSTGQVCSNGTRVFVQRKIKDAFLARLKERTEAIVIGDPMDEATQLGPMVSKAQRDKVLSYIEQGKAEGARLVTGGGIPNAVNTEGTYIQPTVFADVTDEMTIAREEIFGPVMCVLDFDDEAEVVARANATEFGLSAGVFTADLTRAHRVVDQLEAGTLWINTYNL-APVEIPFGGSKQSGFGRENSVAALNHYTELKTVYVGM 480          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: BADH_ATRHO (Betaine aldehyde dehydrogenase, chloroplastic OS=Atriplex hortensis PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 8.760e-19
Identity = 64/200 (32.00%), Postives = 101/200 (50.50%), Query Frame = -1
Query:  270 GGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFC-----QEYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQIN-SAPARGPDHFPFQGFKDSGIGSQ----GVTNSINM 836
            G F  +GQ C+A   +LV ES+A             + +  P EE C + PV+S+   + I   +  AK +GAT        E+ ++G  I P ++ ++   M+I  EE FGPV+ V    + +E I   N + +GL G VF+KD+ +   ++ A+E G V +N S P     H P+ G K SG G +    G+ N +N+
Sbjct:  287 GVFWTNGQICSATSRLLVHESIAAEFVDRMVKWTKNIKISDPFEEGCRLGPVISKGQYDKIMKFISTAKSEGATILCGGSRPEHLKKGYYIEPTIITDITTSMQIWKEEVFGPVICVKTFKTEDEAIELANDTEYGLAGAVFSKDLERCERVTKALEVGAVWVNCSQPCF--VHAPWGGVKRSGFGRELGEWGIENYLNI 484          
The following BLAST results are available for this feature:
BLAST of CV885282 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 339
Match NameE-valueIdentityDescription
AL1A3_MOUSE3.011e-1934.63Aldehyde dehydrogenase family 1 member A3 OS=Mus m... [more]
ALDH2_HUMAN3.932e-1932.02Aldehyde dehydrogenase, mitochondrial OS=Homo sapi... [more]
BETB_RHILW5.136e-1930.92Betaine aldehyde dehydrogenase OS=Rhizobium legumi... [more]
ALDH2_PONAB5.136e-1932.02Aldehyde dehydrogenase, mitochondrial OS=Pongo abe... [more]
ALDH2_HORSE5.136e-1932.51Aldehyde dehydrogenase, mitochondrial OS=Equus cab... [more]
BETB_RHIL36.708e-1929.95Betaine aldehyde dehydrogenase OS=Rhizobium legumi... [more]
YLX7_SCHPO8.760e-1932.00Putative aldehyde dehydrogenase-like protein C922.... [more]
IOLA2_BACWK8.760e-1930.16Methylmalonate semialdehyde dehydrogenase [acylati... [more]
BETB_RHISN8.760e-1928.99Betaine aldehyde dehydrogenase OS=Rhizobium sp. (s... [more]
BADH_ATRHO8.760e-1932.00Betaine aldehyde dehydrogenase, chloroplastic OS=A... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_013G05_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_013_T3_G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885282 ID=CV885282; Name=CV885282; organism=Citrus sinensis; type=EST; length=845bp
GAAACTATTGCGTTCTGTCTCACATATTACATATATGTTGATGCACATAT
CTCCATTATTTATCATCTGCAAAGCGTGAAGTACTAGAAAGGCAGATACA
TAATACAATTCTGCAGATAAAACTCGTCCCTCTTCATCGCTAGTTATTAT
ACCTAAACTAAAATACCGTTCGTTCTTAACTGTTTCCTAATGGCTTAATT
ATACTTGAATTAACCCATGGTATAAGAAGGACTTGGCAAATTGATAACAG
TGCTTTTGACCTTAGTCATCATGTTGATGCTGTTGGTAACACCTTGTGAG
CCAATTCCACTGTCCTTAAAACCCTGGAAAGGAAAATGATCTGGTCCACG
AGCTGGGGCAGAGTTGATCTGGACGGTTCCTGTCTCCATTGCATCGCTGA
TCAACATTGCTTTGTTAATGTCCTTTGTAAATACACAGCCCTGAAGTCCA
AAGTTGCTAGCATTGCAGTGGTGAATACCTTCCTCAACAGAGCCAATCCT
GATAACAGGCAGAACCGGTCCGAATGGCTCCTCCCATGCGATCCTCATAT
CGGGCCTAACATTGTCAAGCAACAAGGGCCAGATGAGGTTGCCTTCTCTC
CTGTACTCTTGACAGAATGTTGCTCCTTTCTGTTTGGCATCCATAACCAG
CCCTTCAATGAAATTTGCAGATGATTCCGACACAACTGGAGTGATATCAC
AGCTTTCTTCAGGAGGGCCAACTGTCAGTTTCACCACTTTAGCCTTAACC
TTCTCGACCAGGGAATCTGCTACAGATTCCATCACCAAGACAACCTTAAC
TGCAGTGCATCTTTGACCACTGTAAGAAAATCCTCCTTTTATTAT
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