CV885282

Overview
NameCV885282
Unique NameCV885282
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length845
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: AL1B1_BOVIN (Aldehyde dehydrogenase X, mitochondrial (Fragment) OS=Bos taurus GN=ALDH1B1 PE=2 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 3.329e-18
Identity = 62/203 (30.54%), Postives = 97/203 (47.78%), Query Frame = -1
Query:  234 FSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPPEE-SCDITPVVSESSANFIEGLVMDAKQKGATFC---QEYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVINLP 830
            F   GQ C       + ES+ D           +  VG P +      P V       I G +   +++GA      + +R++   I P +   V+ DMRIA EE FGPV P+ +   +EE I   + + +GL   VFT+D++KAM  + A++TGTV +N+       H P  GFK+ G G +   + +   T+VK+  I +P
Sbjct:  306 FFNMGQCCCPGSWTFIEESIYDEFLERTVEKAKQRRVGNPFDLDTQQGPQVDRERFERILGYIQLGQKEGAKLLCGGEHFRQQCFFIKPTVFGGVQDDMRIAREEIFGPVQPLFKFKKIEEVIERADNTRYGLAAAVFTQDLDKAMYFTQALQTGTVWVNTYNV-VTCHTPLGGFKEPGNGRELGEDGLKAYTEVKTVTIKVP 507          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: MSC7_YEAST (Putative aldehyde dehydrogenase-like protein YHR039C OS=Saccharomyces cerevisiae GN=MSC7 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.348e-18
Identity = 63/213 (29.58%), Postives = 100/213 (46.95%), Query Frame = -1
Query:  252 IIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPPEESCDIT--------PVVSESSANFIEGLVMDAKQKGATFCQEYRR-------EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKS 845
            I++G F  SGQ C  ++ V+V +   D L          +T  P  +  DI          ++S++  + +E LV DA  KGA   Q   R       +G+   P LL +V P+M+IA  E FGP+L +++  + +  +   N++ FGL G VF  DI +   ++++++TG V IN          PF G   SG G  G    +  +   KS
Sbjct:  377 IMRGTFQSSGQNCIGIERVIVSKENYDDLVKILNDR---MTANPLRQGSDIDHLENVDMGAMISDNRFDELEALVKDAVAKGARLLQGGSRFKHPKYPQGHYFQPTLLVDVTPEMKIAQNEVFGPILVMMKAKNTDHCVQLANSAPFGLGGSVFGADIKECNYVANSLQTGNVAINDFATFYVCQLPFGGINGSGYGKFGGEEGLLGLCNAKS 586          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: IOLA_BACA2 (Methylmalonate semialdehyde dehydrogenase [acylating] OS=Bacillus amyloliquefaciens (strain FZB42) GN=iolA PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.348e-18
Identity = 60/215 (27.91%), Postives = 96/215 (44.65%), Query Frame = -1
Query:  222 IIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRR----EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVT--NSINMMTKVKSTVINLPSPSY 845
            II   F  +G+RC A  VV V E +AD            + +G   ++   + PV+ E +       +    ++GA    + R     +G  + P + DNV  DM I  +E F PVL VIR+ +++E +   N S F    C+FT + N      + ++ G + IN         FPF G+K S  G+      +S++  T+ K      PSP +
Sbjct:  272 IIGAAFGSAGERCMACAVVTVEEGIADEFMAKLQEKAADIKIGNGLDDGVFLGPVIREDNKKRTHSYIEKGIEEGARLLCDGRENATEDGYFVGPTIFDNVTTDMTIWKDEIFAPVLSVIRVKNLKEAVDIANQSEFANGACLFTSNANAIRYFRENIDAGMLGINLGVPAPMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKVVTARYPSPDF 486          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: IOLA3_BACCZ (Methylmalonate semialdehyde dehydrogenase [acylating] 3 OS=Bacillus cereus (strain ZK / E33L) GN=iolA3 PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.348e-18
Identity = 58/206 (28.16%), Postives = 96/206 (46.60%), Query Frame = -1
Query:  255 IIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRRE------GNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGS--QGVTNSINMMTKVK 845
            II   F  +G+RC A  VV V E +AD L         K+ +G   +E   + PV+ ++      G +    ++GAT  ++ R +      G  + P + D+V  +M+I  +E F PVL ++R+ S++E I   N S F    C++T          + +E+G + +N         FPF G+KDS  G      T+ +   T+ K
Sbjct:  274 IISAAFGSAGERCMAASVVTVQEEIADQLVGRLVEEANKIVIGNGLDEDVFLGPVIRDNHKERTIGYIDSGVEQGATLVRDGREDTAVKGAGYFVGPTIFDHVTQEMKIWQDEIFAPVLSIVRVKSLDEAIEIANESRFANGACIYTDSGASVRQFRETIESGMLGVNVGVPAPMAFFPFSGWKDSFYGDLHANGTDGVEFYTRKK 479          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: ALDH_CLAHE (Aldehyde dehydrogenase OS=Cladosporium herbarum GN=CLAH10 PE=1 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 4.348e-18
Identity = 68/204 (33.33%), Postives = 100/204 (49.02%), Query Frame = -1
Query:  237 GGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPPEESCDIT-PVVSESSANFIEGLVMDAKQKGATFCQEYRREGN---LIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVINL 836
            G F   GQ C A   V V ES+ D           K  VG P  +     P VS+   + I   +   K  GAT     +R+G+    I P +  NV  DM+I  EE FGPV  + +  + E+ I   NAS +GL   V TK++N A+ +S+A++ GTV +N+         PF G+K+SGIG +   +++   T+ K+  I L
Sbjct:  288 GIFFNHGQCCCAGSRVYVQESIYDKFVQKFKERAQKNVVGDPFAADTFQGPQVSKVQFDRIMEYIQAGKDAGATVETGGKRKGDKGYFIEPTIFSNVTEDMKIVKEEIFGPVCSIAKFKTKEDAIKLGNASTYGLAAAVHTKNLNTAIEVSNALKAGTVWVNTYNTL-HHQMPFGGYKESGIGRELGEDALANYTQTKTVSIRL 490          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: AL1B1_MOUSE (Aldehyde dehydrogenase X, mitochondrial OS=Mus musculus GN=Aldh1b1 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.678e-18
Identity = 64/203 (31.53%), Postives = 96/203 (47.29%), Query Frame = -1
Query:  234 FSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPPEE-SCDITPVVSESSANFIEGLVMDAKQKGATFC---QEYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVINLP 830
            F   GQ C A     V ES+             +  VG P E      P V +     I G +   +++GA      +     G  I P +  +V+  MRIA EE FGPV P+ +   +EE I   N + +GL   VFT+D++KA+  + A++ GTV +N+       H PF GFK+SG G +   + +   T+VK+  I +P
Sbjct:  314 FFNMGQCCCAGSRTFVEESIYREFLERTVEKAKQRKVGNPFELDTQQGPQVDKEQFERILGYIRLGQKEGAKLLCGGERLGERGFFIKPTVFGDVQDGMRIAKEEIFGPVQPLFKFKKIEEVIQRANNTRYGLAAAVFTRDLDKAIYFTQALQAGTVWVNTYNI-VTCHTPFGGFKESGNGRELGEDGLRAYTEVKTVTIKVP 515          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: AL1A7_RAT (Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus GN=Aldh1a7 PE=1 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 5.678e-18
Identity = 64/205 (31.22%), Postives = 100/205 (48.78%), Query Frame = -1
Query:  237 KGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPPEES-CDITPVVSESSANFIEGLVMDAKQKGATFCQEYRREGN---LIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVINL 839
            +G F + GQ C A   + V ES+ D           K  +G P +S     P + +     I  L+   K++GA       R GN    + P +  NV  +MRIA EE FGPV  +++  S++E I   N + +GL   VFTKD+++A+ +S A++ GTV +N          PF GFK SG G +     +   T++K+  + +
Sbjct:  293 QGVFFHQGQICVAASRLFVEESIYDEFVRRSVERAKKYVLGNPLDSGISQGPQIDKEQHAKILDLIESGKKEGAKLECGGGRWGNKGFFVQPTVFSNVTDEMRIAKEEIFGPVQQIMKFKSIDEVIKRANNTPYGLAAGVFTKDLDRAITVSSALQAGTVWVNCYLTLSV-QCPFGGFKMSGNGREMGEQGVYEYTELKTVAMKI 496          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: AL1A1_HUMAN (Retinal dehydrogenase 1 OS=Homo sapiens GN=ALDH1A1 PE=1 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 5.678e-18
Identity = 65/204 (31.86%), Postives = 99/204 (48.53%), Query Frame = -1
Query:  237 GGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATF-CQ--EYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVINL 836
            G F + GQ C A   + V ES+ D           K  +G P        P + +   + I  L+   K++GA   C    +  +G  + P +  NV  +MRIA EE FGPV  +++  S+++ I   N + +GL   VFTKDI+KA+ IS A++ GTV +N          PF GFK SG G +      +  T+VK+  + +
Sbjct:  294 GVFYHQGQCCIAASRIFVEESIYDEFVRRSVERAKKYILGNPLTPGVTQGPQIDKEQYDKILDLIESGKKEGAKLECGGGPWGNKGYFVQPTVFSNVTDEMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGVFTKDIDKAITISSALQAGTVWVNCYGVVSA-QCPFGGFKMSGNGRELGEYGFHEYTEVKTVTVKI 496          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: IOLA2_BACHK (Methylmalonate semialdehyde dehydrogenase [acylating] 2 OS=Bacillus thuringiensis subsp. konkukian GN=iolA2 PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 7.416e-18
Identity = 58/206 (28.16%), Postives = 96/206 (46.60%), Query Frame = -1
Query:  255 IIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRRE------GNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGS--QGVTNSINMMTKVK 845
            II   F  +G+RC A  VV V E +AD L         K+ +G   +E   + PV+ ++      G +    ++GAT  ++ R +      G  + P + D+V  +M+I  +E F PVL ++R+ S++E I   N S F    C++T          + +E+G + +N         FPF G+KDS  G      T+ +   T+ K
Sbjct:  274 IISAAFGSAGERCMAASVVTVEEEIADQLVERLVAEANKIVIGNGLDEDVFLGPVIRDNHKERTIGYIDSGVEQGATLVRDGREDTAVKGAGYFVGPTIFDHVTKEMKIWQDEIFAPVLSIVRVKSLDEAIEIANESRFANGACIYTDSGASVRQFRETIESGMLGVNVGVPAPMAFFPFSGWKDSFYGDLHANGTDGVEFYTRKK 479          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: IOLA2_BACCZ (Methylmalonate semialdehyde dehydrogenase [acylating] 2 OS=Bacillus cereus (strain ZK / E33L) GN=iolA2 PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 7.416e-18
Identity = 58/206 (28.16%), Postives = 96/206 (46.60%), Query Frame = -1
Query:  255 IIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRRE------GNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGS--QGVTNSINMMTKVK 845
            II   F  +G+RC A  VV V E +AD L         K+ +G   +E   + PV+ ++      G +    ++GAT  ++ R +      G  + P + D+V  +M+I  +E F PVL ++R+ S++E I   N S F    C++T          + +E+G + +N         FPF G+KDS  G      T+ +   T+ K
Sbjct:  275 IISAAFGSAGERCMAASVVTVEEEIADQLVGRLVEEANKIVIGNGLDEDVFLGPVIRDNHKERTIGYIDSGVEQGATLVRDGREDTAVKGAGYFVGPTIFDHVTKEMKIWQDEIFAPVLSIVRVKSLDEAIEIANESRFANGACIYTDSGASVRQFRETIESGMLGVNVGVPAPMAFFPFSGWKDSFYGDLHANGTDGVEFYTRKK 480          
The following BLAST results are available for this feature:
BLAST of CV885282 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 339
Match NameE-valueIdentityDescription
AL1B1_BOVIN3.329e-1830.54Aldehyde dehydrogenase X, mitochondrial (Fragment)... [more]
MSC7_YEAST4.348e-1829.58Putative aldehyde dehydrogenase-like protein YHR03... [more]
IOLA_BACA24.348e-1827.91Methylmalonate semialdehyde dehydrogenase [acylati... [more]
IOLA3_BACCZ4.348e-1828.16Methylmalonate semialdehyde dehydrogenase [acylati... [more]
ALDH_CLAHE4.348e-1833.33Aldehyde dehydrogenase OS=Cladosporium herbarum GN... [more]
AL1B1_MOUSE5.678e-1831.53Aldehyde dehydrogenase X, mitochondrial OS=Mus mus... [more]
AL1A7_RAT5.678e-1831.22Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norv... [more]
AL1A1_HUMAN5.678e-1831.86Retinal dehydrogenase 1 OS=Homo sapiens GN=ALDH1A1... [more]
IOLA2_BACHK7.416e-1828.16Methylmalonate semialdehyde dehydrogenase [acylati... [more]
IOLA2_BACCZ7.416e-1828.16Methylmalonate semialdehyde dehydrogenase [acylati... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_013G05_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_013_T3_G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885282 ID=CV885282; Name=CV885282; organism=Citrus sinensis; type=EST; length=845bp
GAAACTATTGCGTTCTGTCTCACATATTACATATATGTTGATGCACATAT
CTCCATTATTTATCATCTGCAAAGCGTGAAGTACTAGAAAGGCAGATACA
TAATACAATTCTGCAGATAAAACTCGTCCCTCTTCATCGCTAGTTATTAT
ACCTAAACTAAAATACCGTTCGTTCTTAACTGTTTCCTAATGGCTTAATT
ATACTTGAATTAACCCATGGTATAAGAAGGACTTGGCAAATTGATAACAG
TGCTTTTGACCTTAGTCATCATGTTGATGCTGTTGGTAACACCTTGTGAG
CCAATTCCACTGTCCTTAAAACCCTGGAAAGGAAAATGATCTGGTCCACG
AGCTGGGGCAGAGTTGATCTGGACGGTTCCTGTCTCCATTGCATCGCTGA
TCAACATTGCTTTGTTAATGTCCTTTGTAAATACACAGCCCTGAAGTCCA
AAGTTGCTAGCATTGCAGTGGTGAATACCTTCCTCAACAGAGCCAATCCT
GATAACAGGCAGAACCGGTCCGAATGGCTCCTCCCATGCGATCCTCATAT
CGGGCCTAACATTGTCAAGCAACAAGGGCCAGATGAGGTTGCCTTCTCTC
CTGTACTCTTGACAGAATGTTGCTCCTTTCTGTTTGGCATCCATAACCAG
CCCTTCAATGAAATTTGCAGATGATTCCGACACAACTGGAGTGATATCAC
AGCTTTCTTCAGGAGGGCCAACTGTCAGTTTCACCACTTTAGCCTTAACC
TTCTCGACCAGGGAATCTGCTACAGATTCCATCACCAAGACAACCTTAAC
TGCAGTGCATCTTTGACCACTGTAAGAAAATCCTCCTTTTATTAT
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