CV885282

Overview
NameCV885282
Unique NameCV885282
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length845
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: IOLA2_BACAN (Methylmalonate semialdehyde dehydrogenase [acylating] 2 OS=Bacillus anthracis GN=iolA2 PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 7.416e-18
Identity = 58/206 (28.16%), Postives = 96/206 (46.60%), Query Frame = -1
Query:  255 IIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRRE------GNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGS--QGVTNSINMMTKVK 845
            II   F  +G+RC A  VV V E +AD L         K+ +G   +E   + PV+ ++      G +    ++GAT  ++ R +      G  + P + D+V  +M+I  +E F PVL ++R+ S++E I   N S F    C++T          + +E+G + +N         FPF G+KDS  G      T+ +   T+ K
Sbjct:  274 IISAAFGSAGERCMAASVVTVEEEIADQLVERLVAEANKIVIGNGLDEDVFLGPVIRDNHKERTIGYIDSGVEQGATLVRDGREDTAVKGAGYFVGPTIFDHVTKEMKIWQDEIFAPVLSIVRVKSLDEAIEIANESRFANGACIYTDSGASVRQFRETIESGMLGVNVGVPAPMAFFPFSGWKDSFYGDLHANGTDGVEFYTRKK 479          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: IOLA2_BACAH (Methylmalonate semialdehyde dehydrogenase [acylating] 2 OS=Bacillus thuringiensis (strain Al Hakam) GN=iolA2 PE=3 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 7.416e-18
Identity = 58/206 (28.16%), Postives = 96/206 (46.60%), Query Frame = -1
Query:  255 IIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRRE------GNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGS--QGVTNSINMMTKVK 845
            II   F  +G+RC A  VV V E +AD L         K+ +G   +E   + PV+ ++      G +    ++GAT  ++ R +      G  + P + D+V  +M+I  +E F PVL ++R+ S++E I   N S F    C++T          + +E+G + +N         FPF G+KDS  G      T+ +   T+ K
Sbjct:  274 IISAAFGSAGERCMAASVVTVEEEIADQLVERLVEEANKIVIGNGLDEDVFLGPVIRDNHKERTIGYIDSGVEQGATLVRDGREDTAVKGAGYFVGPTIFDHVTKEMKIWQDEIFAPVLSIVRVKSLDEAIEIANESRFANGACIYTDSGASVRQFRETIESGMLGVNVGVPAPMAFFPFSGWKDSFYGDLHANGTDGVEFYTRKK 479          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: ALD1_STAES (Putative aldehyde dehydrogenase SE_1720 OS=Staphylococcus epidermidis (strain ATCC 12228) GN=SE_1720 PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 9.686e-18
Identity = 64/197 (32.49%), Postives = 98/197 (49.75%), Query Frame = -1
Query:  252 SGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFCQ------EYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKS 821
            +GQ CTA   VL+ ES+ +           K+ VG P EE   + P++S+   + ++  +     +GA          E   +G    P +  NV   M IA EE FGPV+ VI   +++E I   N + +GL G V  KD +    ++ ++E GT++IN A  R PD  PF G+K+SG+G +     I    +VKS
Sbjct:  275 TGQVCTAGTRVLIPESIKEDYLTAVKEAFSKVKVGQPREEGTQVGPIISKKQFDQVQDYIDKGINEGAELFYGGPGKPEGLDKGYFARPTIFINVDNHMTIAQEEIFGPVMSVITYNNLDEAIEIANDTKYGLAGYVIGKDKDTLRHVARSIEAGTIEINEA-GRKPD-LPFGGYKESGLGREWGDYGIEEFLEVKS 469          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: ALD1_STAEQ (Putative aldehyde dehydrogenase SERP1729 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=SERP1729 PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 9.686e-18
Identity = 64/197 (32.49%), Postives = 98/197 (49.75%), Query Frame = -1
Query:  252 SGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFCQ------EYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKS 821
            +GQ CTA   VL+ ES+ +           K+ VG P EE   + P++S+   + ++  +     +GA          E   +G    P +  NV   M IA EE FGPV+ VI   +++E I   N + +GL G V  KD +    ++ ++E GT++IN A  R PD  PF G+K+SG+G +     I    +VKS
Sbjct:  275 TGQVCTAGTRVLIPESIKEDYLTAVKEAFSKVKVGQPREEGTQVGPIISKKQFDQVQDYIDKGINEGAELFYGGPGKPEGLDKGYFARPTIFINVDNHMTIAQEEIFGPVMSVITYNNLDEAIEIANDTKYGLAGYVIGKDKDTLRHVARSIEAGTIEINEA-GRKPD-LPFGGYKESGLGREWGDYGIEEFLEVKS 469          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: AL1A1_RAT (Retinal dehydrogenase 1 OS=Rattus norvegicus GN=Aldh1a1 PE=1 SV=3)

HSP 1 Score: 90.8929 bits (224), Expect = 9.686e-18
Identity = 62/204 (30.39%), Postives = 100/204 (49.02%), Query Frame = -1
Query:  237 GGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRREGN---LIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVINL 836
            G F + GQ C A   + V ESV D           K  +G P  +  +  P + +   + I  L+   K++GA       R GN    + P +  NV  +MRIA EE FGPV  +++  S+++ I   N + +GL   VFTKD+++A+ +S A++ G V +N          PF GFK SG G +   + +   T++K+  + +
Sbjct:  294 GVFYHQGQCCVAASRIFVEESVYDEFVRKSVERAKKYVLGNPLTQGINQGPQIDKEQHDKILDLIESGKKEGAKLECGGGRWGNKGFFVQPTVFSNVTDEMRIAKEEIFGPVQQIMKFKSIDDVIKRANNTTYGLAAGVFTKDLDRAITVSSALQAGVVWVNCYMILSA-QCPFGGFKMSGNGRELGEHGLYEYTELKTVAMKI 496          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: ALD1_STAAW (Putative aldehyde dehydrogenase MW2046 OS=Staphylococcus aureus (strain MW2) GN=MW2046 PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.265e-17
Identity = 63/197 (31.98%), Postives = 96/197 (48.73%), Query Frame = -1
Query:  252 SGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFCQ------EYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKS 821
            +GQ CTA   VLV + + D+          ++ VG P E+   + P++S+   + ++  +    ++GA          E   +G    P +  NV   M IA EE FGPV+ VI    ++E I   N + +GL G V  KD      ++ ++E GTV+IN A  R PD  PF G+K SG+G +     I    +VKS
Sbjct:  275 TGQVCTAGTRVLVPKKIKDAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINEA-GRKPD-LPFGGYKQSGLGREWGDYGIEEFLEVKS 469          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: ALD1_STAAS (Putative aldehyde dehydrogenase SAS2025 OS=Staphylococcus aureus (strain MSSA476) GN=SAS2025 PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.265e-17
Identity = 63/197 (31.98%), Postives = 96/197 (48.73%), Query Frame = -1
Query:  252 SGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFCQ------EYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKS 821
            +GQ CTA   VLV + + D+          ++ VG P E+   + P++S+   + ++  +    ++GA          E   +G    P +  NV   M IA EE FGPV+ VI    ++E I   N + +GL G V  KD      ++ ++E GTV+IN A  R PD  PF G+K SG+G +     I    +VKS
Sbjct:  275 TGQVCTAGTRVLVPKKIKDAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINEA-GRKPD-LPFGGYKQSGLGREWGDYGIEEFLEVKS 469          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: SSDH_RAT (Succinate-semialdehyde dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Aldh5a1 PE=1 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.652e-17
Identity = 65/197 (32.99%), Postives = 92/197 (46.70%), Query Frame = -1
Query:  255 FSYSGQRCTAVKVVLVMESVADS-LXXXXXXXXXKLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRRE---GNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVK 830
            F  +GQ C      LV   + DS +          L VG   EE     P+++E +   +E  V DA  KGAT     +R    GN   P LL NV  DM    EE FGPV PVI+    EE +   NA++ GL G  +++D  +   +++ +E G V +N       +  PF G K SG+G +G    I+   +VK
Sbjct:  321 FRNAGQTCVCSNRFLVQRGIHDSFVTKFAEAMKKSLRVGNGFEEGTTQGPLINEKAVEKVEKHVNDAVAKGATVVTGGKRHQSGGNFFEPTLLSNVTRDMLCITEETFGPVAPVIKFDKEEEAVAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVE-CPFGGVKQSGLGREGSKYGIDEYLEVK 516          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: IOLA1_GEOTN (Methylmalonate semialdehyde dehydrogenase [acylating] 1 OS=Geobacillus thermodenitrificans (strain NG80-2) GN=iolA1 PE=3 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.652e-17
Identity = 55/189 (29.10%), Postives = 90/189 (47.62%), Query Frame = -1
Query:  300 IIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRR------EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIG 845
            II   F  +G+RC A  VV+ +  +AD L         ++ +G   EES  + PV+ E+        +   +++GA   ++ R+      EG  I P + D V  DM I  +E F PVL ++R+ +++E I   N S F    C++T+D        D ++ G + +N         FPF G+K+S  G
Sbjct:  273 IINAAFGSAGERCMAASVVVAVGDIADELVERLVAAANEIKIGNGLEESVFLGPVIREAHKQRTVNYIELGEKEGAILVRDGRKDAAVQGEGYFIGPTIFDRVTTDMTIWKDEIFAPVLSIVRVSTLDEAIEVANKSPFANGACIYTRDGGNVRKFRDEIDAGMLGVNLGVPAPMAFFPFSGWKNSFYG 461          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: BETB_SINMW (Betaine aldehyde dehydrogenase OS=Sinorhizobium medicae (strain WSM419) GN=betB PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.652e-17
Identity = 59/207 (28.50%), Postives = 95/207 (45.89%), Query Frame = -1
Query:  237 GGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFC------QEYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVINL 836
            G F  +GQ C+    V V + +  S           + +G P +E+  + P+VS +  + +   +   K +GA              EG  I P +  +V  +M IA EE FGPV+ V+      E +   NA+ FGL   VFT D+ +A  + D +E GT+ IN+     P   PF G K SG G +    ++   T++K+  + +
Sbjct:  275 GNFYSTGQVCSNGTRVFVQKKIKQSFLARLKERTDAIVIGDPMDEATQLGPMVSTAQRDKVFSYIEKGKSEGARLVTGGGIPNNVSAEGTYIQPTVFADVTDEMTIAREEIFGPVMCVLDFDDEAEVVARANATEFGLSAGVFTADLTRAHRVVDRLEAGTLWINTYNL-CPVEIPFGGSKQSGFGRENSAEALKHYTELKTVYVGM 480          
The following BLAST results are available for this feature:
BLAST of CV885282 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 339
Match NameE-valueIdentityDescription
IOLA2_BACAN7.416e-1828.16Methylmalonate semialdehyde dehydrogenase [acylati... [more]
IOLA2_BACAH7.416e-1828.16Methylmalonate semialdehyde dehydrogenase [acylati... [more]
ALD1_STAES9.686e-1832.49Putative aldehyde dehydrogenase SE_1720 OS=Staphyl... [more]
ALD1_STAEQ9.686e-1832.49Putative aldehyde dehydrogenase SERP1729 OS=Staphy... [more]
AL1A1_RAT9.686e-1830.39Retinal dehydrogenase 1 OS=Rattus norvegicus GN=Al... [more]
ALD1_STAAW1.265e-1731.98Putative aldehyde dehydrogenase MW2046 OS=Staphylo... [more]
ALD1_STAAS1.265e-1731.98Putative aldehyde dehydrogenase SAS2025 OS=Staphyl... [more]
SSDH_RAT1.652e-1732.99Succinate-semialdehyde dehydrogenase, mitochondria... [more]
IOLA1_GEOTN1.652e-1729.10Methylmalonate semialdehyde dehydrogenase [acylati... [more]
BETB_SINMW1.652e-1728.50Betaine aldehyde dehydrogenase OS=Sinorhizobium me... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_013G05_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_013_T3_G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885282 ID=CV885282; Name=CV885282; organism=Citrus sinensis; type=EST; length=845bp
GAAACTATTGCGTTCTGTCTCACATATTACATATATGTTGATGCACATAT
CTCCATTATTTATCATCTGCAAAGCGTGAAGTACTAGAAAGGCAGATACA
TAATACAATTCTGCAGATAAAACTCGTCCCTCTTCATCGCTAGTTATTAT
ACCTAAACTAAAATACCGTTCGTTCTTAACTGTTTCCTAATGGCTTAATT
ATACTTGAATTAACCCATGGTATAAGAAGGACTTGGCAAATTGATAACAG
TGCTTTTGACCTTAGTCATCATGTTGATGCTGTTGGTAACACCTTGTGAG
CCAATTCCACTGTCCTTAAAACCCTGGAAAGGAAAATGATCTGGTCCACG
AGCTGGGGCAGAGTTGATCTGGACGGTTCCTGTCTCCATTGCATCGCTGA
TCAACATTGCTTTGTTAATGTCCTTTGTAAATACACAGCCCTGAAGTCCA
AAGTTGCTAGCATTGCAGTGGTGAATACCTTCCTCAACAGAGCCAATCCT
GATAACAGGCAGAACCGGTCCGAATGGCTCCTCCCATGCGATCCTCATAT
CGGGCCTAACATTGTCAAGCAACAAGGGCCAGATGAGGTTGCCTTCTCTC
CTGTACTCTTGACAGAATGTTGCTCCTTTCTGTTTGGCATCCATAACCAG
CCCTTCAATGAAATTTGCAGATGATTCCGACACAACTGGAGTGATATCAC
AGCTTTCTTCAGGAGGGCCAACTGTCAGTTTCACCACTTTAGCCTTAACC
TTCTCGACCAGGGAATCTGCTACAGATTCCATCACCAAGACAACCTTAAC
TGCAGTGCATCTTTGACCACTGTAAGAAAATCCTCCTTTTATTAT
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