CV885282

Overview
NameCV885282
Unique NameCV885282
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length845
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: ALDH_EMENI (Aldehyde dehydrogenase OS=Emericella nidulans GN=aldA PE=3 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.652e-17
Identity = 66/199 (33.17%), Postives = 99/199 (49.75%), Query Frame = -1
Query:  252 GGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRREGN---LIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKS 836
            G F   GQ C A   +LV E + D           K  VG P E+     P VS+   + I   +   K+ GAT      R GN    I P +  +V  DM+IA EE FGPV+ + +     E I   N++++GL   V TK++N A+ +S+A++ GTV IN+         PF GFK SG+G +  + ++   T++K+
Sbjct:  289 GIFFNHGQCCCAGSRILVQEGIYDKFVARFKERAQKNKVGNPFEQDTFQGPQVSQLQFDRIMEYINHGKKAGATVATGGDRHGNEGYFIQPTVFTDVTSDMKIAQEEIFGPVVTIQKFKDEAEAIKIGNSTDYGLAAAVHTKNVNTAIRVSNALKAGTVWINNYNMIS-YQAPFGGFKQSGLGRELGSYALENYTQIKT 486          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: ALDH_ASPNG (Aldehyde dehydrogenase OS=Aspergillus niger GN=aldA PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.652e-17
Identity = 64/199 (32.16%), Postives = 97/199 (48.74%), Query Frame = -1
Query:  252 GGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPPEESCDIT-PVVSESSANFIEGLVMDAKQKGATFC---QEYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKS 836
            G F   GQ C A   +LV E + D           +  VG P        P VS+   + I   +   K  GAT     + +  EG  I P +  +V  DM+I  EE FGPV+ V +   VE+ I   N++++GL   + TKD+  A+ +S+A+  GTV +NS         PF GFK+SGIG +  + ++   T++K+
Sbjct:  290 GIFYNHGQCCCAGSRILVQEGIYDKFIARLKERALQNKVGDPFAKDTFQGPQVSQLQFDRIMEYIQHGKDAGATVAVGGERHGTEGYFIQPTVFTDVTSDMKINQEEIFGPVVTVQKFKDVEDAIKIGNSTSYGLAAGIHTKDVTTAIRVSNALRAGTVWVNSYNLI-QYQVPFGGFKESGIGRELGSYALENYTQIKA 487          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: ALD1_STAAR (Putative aldehyde dehydrogenase SAR2210 OS=Staphylococcus aureus (strain MRSA252) GN=SAR2210 PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.652e-17
Identity = 63/197 (31.98%), Postives = 95/197 (48.22%), Query Frame = -1
Query:  252 SGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFCQ------EYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKS 821
            +GQ CTA   VLV   + D+          ++ VG P E+   + P++S+   + ++  +    ++GA          E   +G    P +  NV   M IA EE FGPV+ VI    ++E I   N + +GL G V  KD      ++ ++E GTV+IN A  R PD  PF G+K SG+G +     I    +VKS
Sbjct:  275 TGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINEA-GRKPD-LPFGGYKQSGLGREWGDYGIEEFLEVKS 469          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: ALD1_STAAN (Putative aldehyde dehydrogenase SA1924 OS=Staphylococcus aureus (strain N315) GN=SA1924 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.652e-17
Identity = 63/197 (31.98%), Postives = 95/197 (48.22%), Query Frame = -1
Query:  252 SGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFCQ------EYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKS 821
            +GQ CTA   VLV   + D+          ++ VG P E+   + P++S+   + ++  +    ++GA          E   +G    P +  NV   M IA EE FGPV+ VI    ++E I   N + +GL G V  KD      ++ ++E GTV+IN A  R PD  PF G+K SG+G +     I    +VKS
Sbjct:  275 TGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINEA-GRKPD-LPFGGYKQSGLGREWGDYGIEEFLEVKS 469          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: ALD1_STAAM (Putative aldehyde dehydrogenase SAV2122 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=SAV2122 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.652e-17
Identity = 63/197 (31.98%), Postives = 95/197 (48.22%), Query Frame = -1
Query:  252 SGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFCQ------EYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKS 821
            +GQ CTA   VLV   + D+          ++ VG P E+   + P++S+   + ++  +    ++GA          E   +G    P +  NV   M IA EE FGPV+ VI    ++E I   N + +GL G V  KD      ++ ++E GTV+IN A  R PD  PF G+K SG+G +     I    +VKS
Sbjct:  275 TGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINEA-GRKPD-LPFGGYKQSGLGREWGDYGIEEFLEVKS 469          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: ALD1_STAAC (Putative aldehyde dehydrogenase SACOL2114 OS=Staphylococcus aureus (strain COL) GN=SACOL2114 PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.652e-17
Identity = 63/197 (31.98%), Postives = 95/197 (48.22%), Query Frame = -1
Query:  252 SGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFCQ------EYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKS 821
            +GQ CTA   VLV   + D+          ++ VG P E+   + P++S+   + ++  +    ++GA          E   +G    P +  NV   M IA EE FGPV+ VI    ++E I   N + +GL G V  KD      ++ ++E GTV+IN A  R PD  PF G+K SG+G +     I    +VKS
Sbjct:  275 TGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINEA-GRKPD-LPFGGYKQSGLGREWGDYGIEEFLEVKS 469          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: ALD1_STAA8 (Putative aldehyde dehydrogenase SAOUHSC_02363 OS=Staphylococcus aureus (strain NCTC 8325) GN=SAOUHSC_02363 PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.652e-17
Identity = 63/197 (31.98%), Postives = 95/197 (48.22%), Query Frame = -1
Query:  252 SGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFCQ------EYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKS 821
            +GQ CTA   VLV   + D+          ++ VG P E+   + P++S+   + ++  +    ++GA          E   +G    P +  NV   M IA EE FGPV+ VI    ++E I   N + +GL G V  KD      ++ ++E GTV+IN A  R PD  PF G+K SG+G +     I    +VKS
Sbjct:  275 TGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINEA-GRKPD-LPFGGYKQSGLGREWGDYGIEEFLEVKS 469          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: ALD1_STAA3 (Putative aldehyde dehydrogenase SAUSA300_2076 OS=Staphylococcus aureus (strain USA300) GN=SAUSA300_2076 PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.652e-17
Identity = 63/197 (31.98%), Postives = 95/197 (48.22%), Query Frame = -1
Query:  252 SGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFCQ------EYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKS 821
            +GQ CTA   VLV   + D+          ++ VG P E+   + P++S+   + ++  +    ++GA          E   +G    P +  NV   M IA EE FGPV+ VI    ++E I   N + +GL G V  KD      ++ ++E GTV+IN A  R PD  PF G+K SG+G +     I    +VKS
Sbjct:  275 TGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINEA-GRKPD-LPFGGYKQSGLGREWGDYGIEEFLEVKS 469          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: AL1A1_SHEEP (Retinal dehydrogenase 1 OS=Ovis aries GN=ALDH1A1 PE=1 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.652e-17
Identity = 64/205 (31.22%), Postives = 99/205 (48.29%), Query Frame = -1
Query:  237 KGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATF-CQ--EYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVINL 839
            +G F + GQ C A   + V ES+ D           K  +G P        P + +     I  L+   K++GA   C    +  +G  I P +  +V  DMRIA EE FGPV  +++  S+++ I   N + +GL   +FT DI+KA+ +S A+++GTV +N          PF GFK SG G +      +  T+VK+  I +
Sbjct:  293 QGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSA-QCPFGGFKMSGNGRELGEYGFHEYTEVKTVTIKI 496          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: AL1A1_MOUSE (Retinal dehydrogenase 1 OS=Mus musculus GN=Aldh1a1 PE=1 SV=5)

HSP 1 Score: 90.1225 bits (222), Expect = 1.652e-17
Identity = 63/204 (30.88%), Postives = 99/204 (48.53%), Query Frame = -1
Query:  237 GGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRREGN---LIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVINL 836
            G F + GQ C A   + V ESV D           K  +G P     +  P + +   + I  L+   K++GA       R GN    + P +  NV  +MRIA EE FGPV  +++  SV++ I   N + +GL   +FTKD++KA+ +S A++ G V +N          PF GFK SG G +   + +   T++K+  + +
Sbjct:  294 GVFYHQGQCCVAASRIFVEESVYDEFVKRSVERAKKYVLGNPLTPGINQGPQIDKEQHDKILDLIESGKKEGAKLECGGGRWGNKGFFVQPTVFSNVTDEMRIAKEEIFGPVQQIMKFKSVDDVIKRANNTTYGLAAGLFTKDLDKAITVSSALQAGVVWVNCYMMLSA-QCPFGGFKMSGNGRELGEHGLYEYTELKTVAMKI 496          
The following BLAST results are available for this feature:
BLAST of CV885282 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 339
Match NameE-valueIdentityDescription
ALDH_EMENI1.652e-1733.17Aldehyde dehydrogenase OS=Emericella nidulans GN=a... [more]
ALDH_ASPNG1.652e-1732.16Aldehyde dehydrogenase OS=Aspergillus niger GN=ald... [more]
ALD1_STAAR1.652e-1731.98Putative aldehyde dehydrogenase SAR2210 OS=Staphyl... [more]
ALD1_STAAN1.652e-1731.98Putative aldehyde dehydrogenase SA1924 OS=Staphylo... [more]
ALD1_STAAM1.652e-1731.98Putative aldehyde dehydrogenase SAV2122 OS=Staphyl... [more]
ALD1_STAAC1.652e-1731.98Putative aldehyde dehydrogenase SACOL2114 OS=Staph... [more]
ALD1_STAA81.652e-1731.98Putative aldehyde dehydrogenase SAOUHSC_02363 OS=S... [more]
ALD1_STAA31.652e-1731.98Putative aldehyde dehydrogenase SAUSA300_2076 OS=S... [more]
AL1A1_SHEEP1.652e-1731.22Retinal dehydrogenase 1 OS=Ovis aries GN=ALDH1A1 P... [more]
AL1A1_MOUSE1.652e-1730.88Retinal dehydrogenase 1 OS=Mus musculus GN=Aldh1a1... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_013G05_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_013_T3_G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885282 ID=CV885282; Name=CV885282; organism=Citrus sinensis; type=EST; length=845bp
GAAACTATTGCGTTCTGTCTCACATATTACATATATGTTGATGCACATAT
CTCCATTATTTATCATCTGCAAAGCGTGAAGTACTAGAAAGGCAGATACA
TAATACAATTCTGCAGATAAAACTCGTCCCTCTTCATCGCTAGTTATTAT
ACCTAAACTAAAATACCGTTCGTTCTTAACTGTTTCCTAATGGCTTAATT
ATACTTGAATTAACCCATGGTATAAGAAGGACTTGGCAAATTGATAACAG
TGCTTTTGACCTTAGTCATCATGTTGATGCTGTTGGTAACACCTTGTGAG
CCAATTCCACTGTCCTTAAAACCCTGGAAAGGAAAATGATCTGGTCCACG
AGCTGGGGCAGAGTTGATCTGGACGGTTCCTGTCTCCATTGCATCGCTGA
TCAACATTGCTTTGTTAATGTCCTTTGTAAATACACAGCCCTGAAGTCCA
AAGTTGCTAGCATTGCAGTGGTGAATACCTTCCTCAACAGAGCCAATCCT
GATAACAGGCAGAACCGGTCCGAATGGCTCCTCCCATGCGATCCTCATAT
CGGGCCTAACATTGTCAAGCAACAAGGGCCAGATGAGGTTGCCTTCTCTC
CTGTACTCTTGACAGAATGTTGCTCCTTTCTGTTTGGCATCCATAACCAG
CCCTTCAATGAAATTTGCAGATGATTCCGACACAACTGGAGTGATATCAC
AGCTTTCTTCAGGAGGGCCAACTGTCAGTTTCACCACTTTAGCCTTAACC
TTCTCGACCAGGGAATCTGCTACAGATTCCATCACCAAGACAACCTTAAC
TGCAGTGCATCTTTGACCACTGTAAGAAAATCCTCCTTTTATTAT
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