CV885282

Overview
NameCV885282
Unique NameCV885282
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length845
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: AL1A1_BOVIN (Retinal dehydrogenase 1 OS=Bos taurus GN=ALDH1A1 PE=2 SV=3)

HSP 1 Score: 90.1225 bits (222), Expect = 1.652e-17
Identity = 64/205 (31.22%), Postives = 99/205 (48.29%), Query Frame = -1
Query:  237 KGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATF-CQ--EYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVINL 839
            +G F + GQ C A   + V ES+ D           K  +G P        P + +     I  L+   K++GA   C    +  +G  I P +  +V  DMRIA EE FGPV  +++  S+++ I   N + +GL   +FT DI+KA+ +S A+++GTV +N          PF GFK SG G +      +  T+VK+  I +
Sbjct:  293 QGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSA-QCPFGGFKMSGNGRELGEYGFHEYTEVKTVTIKI 496          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: BADH_SPIOL (Betaine aldehyde dehydrogenase, chloroplastic OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.158e-17
Identity = 65/202 (32.18%), Postives = 99/202 (49.01%), Query Frame = -1
Query:  270 IKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFCQ-----EYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQIN-SAPARGPDHFPFQGFKDSGIGSQ----GVTNSINM 842
            I G F  +GQ C+A   +LV ES+A             + +  P EE C + PV+S+   + I   +  AK +GAT        E+ ++G  I P ++ ++   M+I  EE FGPVL V    S +E I   N + +GL   VF+ D+ +   I+ A+E G V +N S P       P+ G K SG G +    G+ N +N+
Sbjct:  280 IFGCFWTNGQICSATSRLLVHESIAAEFVDKLVKWTKNIKISDPFEEGCRLGPVISKGQYDKIMKFISTAKSEGATILYGGSRPEHLKKGYYIEPTIVTDISTSMQIWKEEVFGPVLCVKTFSSEDEAIALANDTEYGLAAAVFSNDLERCERITKALEVGAVWVNCSQPCF--VQAPWGGIKRSGFGRELGEWGIQNYLNI 479          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: IOLA_BACHD (Methylmalonate semialdehyde dehydrogenase [acylating] OS=Bacillus halodurans GN=iolA PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.818e-17
Identity = 58/205 (28.29%), Postives = 99/205 (48.29%), Query Frame = -1
Query:  255 IIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRRE-----GNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGS--QGVTNSINMMTKVK 845
            I+   +  +G+RC A  VV+ +  VA+ L         ++T+G   ++   + PV+ ES     E  +   +++GAT  ++ R++     G  + P L DNV  +M I  EE F PVL V+R+ S++E I   N S F    C++T + +      + ++ G + IN         FPF G+K+S  G      T+ +   T+ K
Sbjct:  275 IVNAAYGSAGERCMAAAVVVAVGEVAEPLMEKLQKAVNEITIGNGLDDDVFLGPVIRESHKQKTENYIELGEKEGATLVRDGRKDNVSKDGYFLGPTLFDNVTTEMTIWKEEIFAPVLSVVRVESLDEAIQLTNQSEFANGACLYTTNGSSVRKFREEIDAGMLGINLGVPAPMAFFPFSGWKNSFYGDLHANGTDGVEFYTRKK 479          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: ALD1_STAAB (Putative aldehyde dehydrogenase SAB2006c OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=SAB2006c PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.818e-17
Identity = 63/197 (31.98%), Postives = 95/197 (48.22%), Query Frame = -1
Query:  252 SGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFCQ------EYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKS 821
            +GQ CTA   VLV   + D+          ++ VG P E+   + P++S+   + ++  +    ++GA          E   +G    P +  NV   M IA EE FGPV+ VI    ++E I   N + +GL G V  KD      ++ ++E GTV+IN A  R PD  PF G+K SG+G +     I    +VKS
Sbjct:  275 TGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPREDGTQVGPMISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINEA-GRKPD-LPFGGYKQSGLGREWGDYGIEEFLEVKS 469          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: AL1A1_MACFA (Retinal dehydrogenase 1 OS=Macaca fascicularis GN=ALDH1A1 PE=2 SV=3)

HSP 1 Score: 89.3521 bits (220), Expect = 2.818e-17
Identity = 64/204 (31.37%), Postives = 98/204 (48.04%), Query Frame = -1
Query:  237 GGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATF-CQ--EYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVINL 836
            G F + GQ C A   + V ES+ D           K  +G P        P + +   + I  L+   K++GA   C    +  +G  + P +  NV  +MRIA EE FGPV  +++  S+++ I   N + +GL   VFT DI+KA+ IS A++ GTV +N          PF GFK SG G +      +  T+VK+  + +
Sbjct:  294 GVFYHQGQCCIAASRIFVEESIYDEFVRRSVERAKKYILGNPLTPGATQGPQIDKEQYDKILDLIESGKKEGAKLECGGGPWGNKGYFVQPTVFSNVTDEMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGVFTNDIDKAVTISSALQAGTVWVNCYGV-VTAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTVKI 496          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: SSDH_MOUSE (Succinate-semialdehyde dehydrogenase, mitochondrial OS=Mus musculus GN=Aldh5a1 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.681e-17
Identity = 64/197 (32.49%), Postives = 91/197 (46.19%), Query Frame = -1
Query:  255 FSYSGQRCTAVKVVLVMESVADS-LXXXXXXXXXKLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRRE---GNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVK 830
            F  +GQ C      LV   + DS +          L VG   EE     P+++E +   +E  V DA  KGAT     +R    GN   P LL NV  DM    EE FGP+ PVI+    EE +   NA+  GL G  +++D  +   +++ +E G V +N       +  PF G K SG+G +G    I+   +VK
Sbjct:  321 FRNAGQTCVCSNRFLVQRGIHDSFVTKFAEAMKKSLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVAKGATVVTGGKRHQSGGNFFEPTLLSNVTRDMLCITEETFGPLAPVIKFDKEEEAVAIANAAEVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVE-CPFGGVKQSGLGREGSKYGIDEYLEVK 516          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: IOLA_BACNA (Methylmalonate semialdehyde dehydrogenase [acylating] OS=Bacillus subtilis subsp. natto GN=iolA PE=3 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 3.681e-17
Identity = 58/215 (26.98%), Postives = 96/215 (44.65%), Query Frame = -1
Query:  222 IIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRR----EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVT--NSINMMTKVKSTVINLPSPSY 845
            I+   F  +G+RC A  VV V E +AD            + +G   ++   + PV+ E +       +    ++GA    + R     +G  + P + DNV  +M I  +E F PVL VIR+ +++E I   N S F    C+FT + N      + ++ G + IN         FPF G+K S  G+      +S++  T+ K      P+P +
Sbjct:  272 IVGAAFGSAGERCMACAVVTVEEGIADEFMAKLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAIRYFRENIDAGMLGINLGVPAPMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKVVTARFPAPDF 486          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: IOLA1_GEOKA (Methylmalonate semialdehyde dehydrogenase [acylating] 1 OS=Geobacillus kaustophilus GN=iolA1 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.681e-17
Identity = 55/205 (26.83%), Postives = 91/205 (44.39%), Query Frame = -1
Query:  255 IIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPPEESCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRRE------GNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVT--NSINMMTKVK 845
            +I   F  +GQRC A   V+++      +          +     +    +TPV+ +S    + G +    ++GA   ++ R+E      GN + P + D V PDM IA EE F PVL ++R   ++E + +   S +G    ++TKD        +  + G + IN         FPF G+KDS  G   V   + +N  T+ K
Sbjct:  276 VISSAFGSAGQRCMACSAVVIVGENETFVRRLKQKADELIIGNGMDPEVLLTPVIRQSHREKVLGYIQKGIEEGAVLLRDGRKEMDDRPEGNFLGPTIFDYVTPDMTIAKEEIFAPVLSLLRANDLDEALSYIRKSRYGNGATIYTKDAKAVRKFREEADAGMLGINVGVPATMAFFPFSGWKDSFYGDLHVNGKDGVNFYTRKK 480          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: BETB_BURP1 (Betaine aldehyde dehydrogenase OS=Burkholderia pseudomallei (strain 1710b) GN=betB PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.681e-17
Identity = 56/210 (26.67%), Postives = 99/210 (47.14%), Query Frame = -1
Query:  237 IKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPPEES-CDITPVVSESSANFIEGLVMDAKQKGATFC-------QEYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVINL 842
            +   F  +GQ CT    V V ++V D+          ++ VG P +S  +  P+ S +  + + G +   K +GA           ++   G  + P +  + R DMRI  EE FGPV+ ++   + +E I   NA+++GL   V T+++++A      +E G   IN+     P   P  G+K SG+G +    ++   T++KS  + L
Sbjct:  274 VTANFFSAGQVCTNGTRVFVQQAVKDAFVERVLARVARIRVGKPSDSDTNFGPLASAAQLDKVLGYIDSGKAEGAKLLAGGARLVNDHFASGQYVAPTVFGDCRDDMRIVREEIFGPVMSILSFETEDEAIARANATDYGLAAGVVTENLSRAHRAIHRLEAGICWINTW-GESPAEMPVGGYKQSGVGRENGITTLEHYTRIKSVQVEL 482          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: BETB_BURP0 (Betaine aldehyde dehydrogenase OS=Burkholderia pseudomallei (strain 1106a) GN=betB PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.681e-17
Identity = 56/210 (26.67%), Postives = 99/210 (47.14%), Query Frame = -1
Query:  237 IKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPPEES-CDITPVVSESSANFIEGLVMDAKQKGATFC-------QEYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVINL 842
            +   F  +GQ CT    V V ++V D+          ++ VG P +S  +  P+ S +  + + G +   K +GA           ++   G  + P +  + R DMRI  EE FGPV+ ++   + +E I   NA+++GL   V T+++++A      +E G   IN+     P   P  G+K SG+G +    ++   T++KS  + L
Sbjct:  274 VTANFFSAGQVCTNGTRVFVQQAVKDAFVERVLARVARIRVGKPSDSDTNFGPLASAAQLDKVLGYIDSGKAEGAKLLAGGARLVNDHFASGQYVAPTVFGDCRDDMRIVREEIFGPVMSILSFETEDEAIARANATDYGLAAGVVTENLSRAHRAIHRLEAGICWINTW-GESPAEMPVGGYKQSGVGRENGITTLEHYTRIKSVQVEL 482          
The following BLAST results are available for this feature:
BLAST of CV885282 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 339
Match NameE-valueIdentityDescription
AL1A1_BOVIN1.652e-1731.22Retinal dehydrogenase 1 OS=Bos taurus GN=ALDH1A1 P... [more]
BADH_SPIOL2.158e-1732.18Betaine aldehyde dehydrogenase, chloroplastic OS=S... [more]
IOLA_BACHD2.818e-1728.29Methylmalonate semialdehyde dehydrogenase [acylati... [more]
ALD1_STAAB2.818e-1731.98Putative aldehyde dehydrogenase SAB2006c OS=Staphy... [more]
AL1A1_MACFA2.818e-1731.37Retinal dehydrogenase 1 OS=Macaca fascicularis GN=... [more]
SSDH_MOUSE3.681e-1732.49Succinate-semialdehyde dehydrogenase, mitochondria... [more]
IOLA_BACNA3.681e-1726.98Methylmalonate semialdehyde dehydrogenase [acylati... [more]
IOLA1_GEOKA3.681e-1726.83Methylmalonate semialdehyde dehydrogenase [acylati... [more]
BETB_BURP13.681e-1726.67Betaine aldehyde dehydrogenase OS=Burkholderia pse... [more]
BETB_BURP03.681e-1726.67Betaine aldehyde dehydrogenase OS=Burkholderia pse... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_013G05_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_013_T3_G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885282 ID=CV885282; Name=CV885282; organism=Citrus sinensis; type=EST; length=845bp
GAAACTATTGCGTTCTGTCTCACATATTACATATATGTTGATGCACATAT
CTCCATTATTTATCATCTGCAAAGCGTGAAGTACTAGAAAGGCAGATACA
TAATACAATTCTGCAGATAAAACTCGTCCCTCTTCATCGCTAGTTATTAT
ACCTAAACTAAAATACCGTTCGTTCTTAACTGTTTCCTAATGGCTTAATT
ATACTTGAATTAACCCATGGTATAAGAAGGACTTGGCAAATTGATAACAG
TGCTTTTGACCTTAGTCATCATGTTGATGCTGTTGGTAACACCTTGTGAG
CCAATTCCACTGTCCTTAAAACCCTGGAAAGGAAAATGATCTGGTCCACG
AGCTGGGGCAGAGTTGATCTGGACGGTTCCTGTCTCCATTGCATCGCTGA
TCAACATTGCTTTGTTAATGTCCTTTGTAAATACACAGCCCTGAAGTCCA
AAGTTGCTAGCATTGCAGTGGTGAATACCTTCCTCAACAGAGCCAATCCT
GATAACAGGCAGAACCGGTCCGAATGGCTCCTCCCATGCGATCCTCATAT
CGGGCCTAACATTGTCAAGCAACAAGGGCCAGATGAGGTTGCCTTCTCTC
CTGTACTCTTGACAGAATGTTGCTCCTTTCTGTTTGGCATCCATAACCAG
CCCTTCAATGAAATTTGCAGATGATTCCGACACAACTGGAGTGATATCAC
AGCTTTCTTCAGGAGGGCCAACTGTCAGTTTCACCACTTTAGCCTTAACC
TTCTCGACCAGGGAATCTGCTACAGATTCCATCACCAAGACAACCTTAAC
TGCAGTGCATCTTTGACCACTGTAAGAAAATCCTCCTTTTATTAT
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