CV885279

Overview
NameCV885279
Unique NameCV885279
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length632
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885279 vs. ExPASy Swiss-Prot
Match: METK4_HORVU (S-adenosylmethionine synthetase 4 OS=Hordeum vulgare GN=SAM4 PE=2 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 2.192e-65
Identity = 118/131 (90.08%), Postives = 126/131 (96.18%), Query Frame = -3
Query:  238 GAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 630
            GAHGGGAFSGKDPTKVDRSGAYI RQAAKSIVA+G+ARRCIVQVSYAIGVPEPLSVFVD+YGTGKIPDKEIL+IVKE+FDFRPGM+ INLDLKRGG+GR+LKTAAYGHFGRD  DFTWEVVKPLKWEKP A
Sbjct:  266 GAHGGGAFSGKDPTKVDRSGAYIARQAAKSIVASGIARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILEIVKENFDFRPGMIIINLDLKRGGSGRYLKTAAYGHFGRDGADFTWEVVKPLKWEKPSA 396          
BLAST of CV885279 vs. ExPASy Swiss-Prot
Match: METK2_ORYSJ (S-adenosylmethionine synthetase 2 OS=Oryza sativa subsp. japonica GN=SAM2 PE=2 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 3.740e-65
Identity = 121/128 (94.53%), Postives = 126/128 (98.44%), Query Frame = -3
Query:  247 GAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEK 630
            GAHGGGAFSGKDPTKVDRSGAYI RQAAKSIVA+GLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKE+FDFRPGMMTINLDLKRGGN RF+KTAAYGHFGR+DPDFTWEVVKPLK+EK
Sbjct:  265 GAHGGGAFSGKDPTKVDRSGAYIARQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMMTINLDLKRGGN-RFIKTAAYGHFGREDPDFTWEVVKPLKYEK 391          
BLAST of CV885279 vs. ExPASy Swiss-Prot
Match: METK4_ARATH (S-adenosylmethionine synthetase 4 OS=Arabidopsis thaliana GN=METK4 PE=1 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 6.379e-65
Identity = 122/131 (93.13%), Postives = 126/131 (96.18%), Query Frame = -3
Query:  238 GAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 630
            GAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVA+GLARR IVQVSYAIGVPEPLSVFVDSYGTGKIPDKEIL+IVKESFDFRPGM++INLDLKRGGNGRFLKTAAYGHFGRDD DFTWEVVKPLK  K QA
Sbjct:  263 GAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRVIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILEIVKESFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDADFTWEVVKPLKSNKVQA 393          
BLAST of CV885279 vs. ExPASy Swiss-Prot
Match: METK_WHEAT (S-adenosylmethionine synthetase OS=Triticum aestivum GN=SAMS PE=2 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 1.088e-64
Identity = 116/131 (88.55%), Postives = 125/131 (95.42%), Query Frame = -3
Query:  238 GAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 630
            GAHGGGAFSGKDPTKVDRSGAY+ RQAAKSIVA+G+ARRCIVQVSYAIGVPEPLSVFVD+YGTGKIPDKEIL+IVKE+FDFRPGM+ INLDLKRGG GR+LKTAAYGHFGR+  DFTWEVVKPLKWEKP A
Sbjct:  266 GAHGGGAFSGKDPTKVDRSGAYVARQAAKSIVASGIARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILEIVKENFDFRPGMIIINLDLKRGGKGRYLKTAAYGHFGREGADFTWEVVKPLKWEKPSA 396          
BLAST of CV885279 vs. ExPASy Swiss-Prot
Match: METK_CARPA (S-adenosylmethionine synthetase OS=Carica papaya GN=SAMS PE=2 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 1.088e-64
Identity = 118/123 (95.93%), Postives = 122/123 (99.19%), Query Frame = -3
Query:  262 GAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKP 630
            GAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSV+VD+YGTGKIPDKEILKIVKE+FDFRPGM+TINLDLKRGGN RFLKTAAYGHFGRDDPDFTWEVVKP
Sbjct:  263 GAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVYVDTYGTGKIPDKEILKIVKENFDFRPGMITINLDLKRGGNSRFLKTAAYGHFGRDDPDFTWEVVKP 385          
BLAST of CV885279 vs. ExPASy Swiss-Prot
Match: METK_MEDFA (S-adenosylmethionine synthetase OS=Medicago falcata GN=SAMS PE=2 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 1.421e-64
Identity = 120/128 (93.75%), Postives = 123/128 (96.09%), Query Frame = -3
Query:  247 GAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEK 630
            GAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEIL IVKE+FDFRPGM++INLDLKRGGN RFLKTAAYGHFGRDD DFTWEVVKPLK  K
Sbjct:  265 GAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILNIVKETFDFRPGMISINLDLKRGGNNRFLKTAAYGHFGRDDADFTWEVVKPLKGGK 392          
BLAST of CV885279 vs. ExPASy Swiss-Prot
Match: METK1_BETVU (S-adenosylmethionine synthetase 1 OS=Beta vulgaris GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 1.856e-64
Identity = 117/131 (89.31%), Postives = 127/131 (96.95%), Query Frame = -3
Query:  238 GAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 630
            GAHGGGAFSGKDPTKVDRSGAYI RQAAKSIVA+GLARRCIVQ+SYAIGVPEPLSVFVD+YGTGKIPDK+ILKIVKE+FDFRPGM+ INLDL +GG+ R+LKTAAYGHFGRDDPDFTWEVVKPLKW+KPQA
Sbjct:  267 GAHGGGAFSGKDPTKVDRSGAYIARQAAKSIVASGLARRCIVQISYAIGVPEPLSVFVDTYGTGKIPDKDILKIVKETFDFRPGMIAINLDLLKGGS-RYLKTAAYGHFGRDDPDFTWEVVKPLKWDKPQA 396          
BLAST of CV885279 vs. ExPASy Swiss-Prot
Match: METK2_PINCO (S-adenosylmethionine synthetase 2 OS=Pinus contorta GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 7.053e-64
Identity = 117/131 (89.31%), Postives = 122/131 (93.13%), Query Frame = -3
Query:  238 GAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 630
            GAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVA GLARRC+VQVSYAIGV   LS+FVDSYGTG IPDKEIL+I+KE FDFRPGM+TINLDLKRGGNGRF KTAAYGHFGRDDPDFTWE VKPLKWEK QA
Sbjct:  263 GAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVAAGLARRCLVQVSYAIGVRGALSIFVDSYGTGSIPDKEILEIIKEHFDFRPGMITINLDLKRGGNGRFQKTAAYGHFGRDDPDFTWETVKPLKWEKAQA 393          
BLAST of CV885279 vs. ExPASy Swiss-Prot
Match: METK3_ATRNU (S-adenosylmethionine synthetase 3 OS=Atriplex nummularia GN=SAMS3 PE=1 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 9.211e-64
Identity = 118/131 (90.08%), Postives = 124/131 (94.66%), Query Frame = -3
Query:  238 GAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 630
            GAHGGGAFSGKDPTKVDRSGAYI RQAAKSIVA GLARRCIVQ+SYAIGVPEPLSVFVD+YGTGKIPDKEILKIVKESFDFRPGM+ INLDL +GG+ R+LKTAAYGHFGRDD DFTWE VKPLKWEKPQA
Sbjct:  267 GAHGGGAFSGKDPTKVDRSGAYIARQAAKSIVAAGLARRCIVQISYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKESFDFRPGMIAINLDLLKGGS-RYLKTAAYGHFGRDDADFTWETVKPLKWEKPQA 396          
BLAST of CV885279 vs. ExPASy Swiss-Prot
Match: METK4_ATRNU (S-adenosylmethionine synthetase 4 OS=Atriplex nummularia GN=SAMS4 PE=1 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 2.052e-63
Identity = 117/131 (89.31%), Postives = 124/131 (94.66%), Query Frame = -3
Query:  238 GAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 630
            GAHGGGAFSGKDPTKVDRSGAYI RQAAKSIVA GLARRCIVQ+SYAIGVPEPLSVFVD+YGTGKIPDKEILKIVKE+FDFRPGM+ INLDL +GG+ R+LKTAAYGHFGRDD DFTWE VKPLKWEKPQA
Sbjct:  267 GAHGGGAFSGKDPTKVDRSGAYIARQAAKSIVAAGLARRCIVQISYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKETFDFRPGMIAINLDLLKGGS-RYLKTAAYGHFGRDDADFTWETVKPLKWEKPQA 396          
The following BLAST results are available for this feature:
BLAST of CV885279 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK4_HORVU2.192e-6590.08S-adenosylmethionine synthetase 4 OS=Hordeum vulga... [more]
METK2_ORYSJ3.740e-6594.53S-adenosylmethionine synthetase 2 OS=Oryza sativa ... [more]
METK4_ARATH6.379e-6593.13S-adenosylmethionine synthetase 4 OS=Arabidopsis t... [more]
METK_WHEAT1.088e-6488.55S-adenosylmethionine synthetase OS=Triticum aestiv... [more]
METK_CARPA1.088e-6495.93S-adenosylmethionine synthetase OS=Carica papaya G... [more]
METK_MEDFA1.421e-6493.75S-adenosylmethionine synthetase OS=Medicago falcat... [more]
METK1_BETVU1.856e-6489.31S-adenosylmethionine synthetase 1 OS=Beta vulgaris... [more]
METK2_PINCO7.053e-6489.31S-adenosylmethionine synthetase 2 OS=Pinus contort... [more]
METK3_ATRNU9.211e-6490.08S-adenosylmethionine synthetase 3 OS=Atriplex numm... [more]
METK4_ATRNU2.052e-6389.31S-adenosylmethionine synthetase 4 OS=Atriplex numm... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_013G03_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_013_T3_G03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885279 ID=CV885279; Name=CV885279; organism=Citrus sinensis; type=EST; length=632bp
CTCAATCGATATCACTACACAACAGTGGTGACATGGTACATTAAACCAAA
ACCAAAAAAGAAGTGGGGAAAGAAGAAAAAGAAAGGAATTGAATGGGGAA
CATGTATGAGTTCTGAACACAGGAGATTTGCTTAGTATTACAAAGCAGCA
GCAAGATAATATTCAAATTATTCATCCACTACCAATAGAAGCAAACTTGA
ACAGCAGGGATAGTTTTCACTTTTCAACTCAAATTTAAGCTTGAGGCTTT
TCCCACTTGAGGGGCTTCACAACTTCCCAAGTGAAGTCTGGGTCATCCCT
GCCAAAGTGTCCATAGGCAGCAGTCTTCAAGAACCTGCCATTACCGCCCC
TTTTGAGATCCAAATTGATGGTCATCATTCCTGGCCTGAAATCAAAGCTT
TCCTTCACAATTTTGAGGATCTCCTTGTCAGGAATCTTGCCGGTTCCATA
TGAGTCCACAAAAACAGACAATGGCTCAGGCACACCAATGGCATAGGAGA
CTTGGACAATGCACCTGCGAGCAAGCCCGTTTGCAACAATGCTCTTAGCA
GCCTGCCTAACAATGTATGCACCACTCCTATCCACCTTAGTAGGGTCTTT
TCCAGAGAAAGCACCGCCACCATGGGCTCCCC
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