CV885270

Overview
NameCV885270
Unique NameCV885270
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length395
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885270 vs. ExPASy Swiss-Prot
Match: METK2_CATRO (S-adenosylmethionine synthetase 2 OS=Catharanthus roseus GN=SAMS2 PE=1 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 1.577e-61
Identity = 112/119 (94.12%), Postives = 116/119 (97.48%), Query Frame = 1
Query:   37 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRAEEIG 393
            METFLFTSESVNEGHPDKLCDQ+SDAVLDACLAQDP+SKVACETCTKTNMVMVFGEITTKA VDYEKIVRDTCR+IGF SDDVGLDAD+CKVLVNIEQQSPDIAQGVHGHLTKR EEIG
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPESKVACETCTKTNMVMVFGEITTKAQVDYEKIVRDTCRAIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIG 119          
BLAST of CV885270 vs. ExPASy Swiss-Prot
Match: METK1_HORVU (S-adenosylmethionine synthetase 1 OS=Hordeum vulgare GN=SAM1 PE=2 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 1.577e-61
Identity = 112/118 (94.92%), Postives = 113/118 (95.76%), Query Frame = 1
Query:   40 ETFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRAEEIG 393
            ETFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKA VDYEKIVRDTCR IGF SDDVGLDADHCKVLVNIEQQSPDIAQGVHGH TKR EE+G
Sbjct:    4 ETFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKATVDYEKIVRDTCRDIGFISDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEEVG 121          
BLAST of CV885270 vs. ExPASy Swiss-Prot
Match: METK_WHEAT (S-adenosylmethionine synthetase OS=Triticum aestivum GN=SAMS PE=2 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 3.514e-61
Identity = 110/119 (92.44%), Postives = 115/119 (96.64%), Query Frame = 1
Query:   37 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRAEEIG 393
            ++TFLFTSESVNEGHPDKLCDQ+SDAVLDACLA+DPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCR IGF S+DVGLDADHCKVLVNIEQQSPDIAQGVHGH TKR EEIG
Sbjct:    4 VDTFLFTSESVNEGHPDKLCDQISDAVLDACLAEDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRGIGFVSNDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEEIG 122          
BLAST of CV885270 vs. ExPASy Swiss-Prot
Match: METK2_SUASA (S-adenosylmethionine synthetase 2 OS=Suaeda salsa GN=METK2 PE=2 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 3.514e-61
Identity = 111/119 (93.28%), Postives = 116/119 (97.48%), Query Frame = 1
Query:   37 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRAEEIG 393
            ME+FLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKAN+DYEKIVRDTCRSIGF S DVGLDAD+CKVLVNIEQQSPDIAQGVHGHLTKR E++G
Sbjct:    1 MESFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANIDYEKIVRDTCRSIGFVSADVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEDVG 119          
BLAST of CV885270 vs. ExPASy Swiss-Prot
Match: METK_PINBN (S-adenosylmethionine synthetase OS=Pinus banksiana GN=METK PE=2 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 5.994e-61
Identity = 111/119 (93.28%), Postives = 114/119 (95.80%), Query Frame = 1
Query:   37 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRAEEIG 393
            METFLFTSESVNEGHPDKLCDQ+SDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKA+VDYE+IVR TCR IGF SDDVGLDADHCKVLVNIEQQSPDIAQGVHGH TKR EEIG
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKADVDYEQIVRKTCREIGFISDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEEIG 119          
BLAST of CV885270 vs. ExPASy Swiss-Prot
Match: METK_MUSAC (S-adenosylmethionine synthetase OS=Musa acuminata GN=METK PE=2 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 5.994e-61
Identity = 109/118 (92.37%), Postives = 113/118 (95.76%), Query Frame = 1
Query:   40 ETFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRAEEIG 393
            +TFLFTSESVNEGHPDKLCDQ+SDAVLDACL QDPDSKVACETCTKTNMVMVFGEITTK N+DYEKIVRDTCR IGFTS+DVGLDADHCKVLVNIEQQSPDIAQGVHGH TKR EEIG
Sbjct:    3 DTFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKGNIDYEKIVRDTCRDIGFTSEDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEEIG 120          
BLAST of CV885270 vs. ExPASy Swiss-Prot
Match: METK2_TOBAC (S-adenosylmethionine synthetase 2 OS=Nicotiana tabacum GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 5.994e-61
Identity = 111/119 (93.28%), Postives = 114/119 (95.80%), Query Frame = 1
Query:   37 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRAEEIG 393
            METFLFTSESVNEGHPDKLCDQVSDA+LDACL QDP+SKVACETCTKTNMVMVFGEITTKA VDYEKIVRDTCR IGFTS DVGLDADHCKVLVNIEQQSPDIAQGVHGHLTK+ EEIG
Sbjct:    1 METFLFTSESVNEGHPDKLCDQVSDAILDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRGIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKKPEEIG 119          
BLAST of CV885270 vs. ExPASy Swiss-Prot
Match: METK2_POPTR (S-adenosylmethionine synthetase 2 OS=Populus trichocarpa GN=METK2 PE=2 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 5.994e-61
Identity = 112/119 (94.12%), Postives = 113/119 (94.96%), Query Frame = 1
Query:   37 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRAEEIG 393
            METFLFTSESVNEGHPDKLCDQVSDA+LDACL QDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVR TCRSIGF SDDVGLDAD C VLVNIEQQSPDIAQGVHGHLTKR EEIG
Sbjct:    1 METFLFTSESVNEGHPDKLCDQVSDAILDACLEQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRSTCRSIGFVSDDVGLDADKCNVLVNIEQQSPDIAQGVHGHLTKRPEEIG 119          
BLAST of CV885270 vs. ExPASy Swiss-Prot
Match: METK1_PETHY (S-adenosylmethionine synthetase 1 OS=Petunia hybrida GN=SAM1 PE=2 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 5.994e-61
Identity = 111/119 (93.28%), Postives = 114/119 (95.80%), Query Frame = 1
Query:   37 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRAEEIG 393
            METFLFTSESVNEGHPDKLCDQVSDA+LDACL QDP+SKVACETCTKTNMVMVFGEITTKA VDYEKIVRDTCR IGFTS DVGLDADHCKVLVNIEQQSPDIAQGVHGHLTK+ EEIG
Sbjct:    1 METFLFTSESVNEGHPDKLCDQVSDAILDACLEQDPESKVACETCTKTNMVMVFGEITTKATVDYEKIVRDTCRGIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKKPEEIG 119          
BLAST of CV885270 vs. ExPASy Swiss-Prot
Match: METK2_ORYSJ (S-adenosylmethionine synthetase 2 OS=Oryza sativa subsp. japonica GN=SAM2 PE=2 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 7.828e-61
Identity = 112/118 (94.92%), Postives = 112/118 (94.92%), Query Frame = 1
Query:   40 ETFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRAEEIG 393
            ETFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKA VDYEKIVRDTCR IGF SDDVGLDAD CKVLVNIEQQSPDIAQGVHGH TKR EEIG
Sbjct:    4 ETFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKATVDYEKIVRDTCRGIGFVSDDVGLDADRCKVLVNIEQQSPDIAQGVHGHFTKRPEEIG 121          
The following BLAST results are available for this feature:
BLAST of CV885270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK2_CATRO1.577e-6194.12S-adenosylmethionine synthetase 2 OS=Catharanthus ... [more]
METK1_HORVU1.577e-6194.92S-adenosylmethionine synthetase 1 OS=Hordeum vulga... [more]
METK_WHEAT3.514e-6192.44S-adenosylmethionine synthetase OS=Triticum aestiv... [more]
METK2_SUASA3.514e-6193.28S-adenosylmethionine synthetase 2 OS=Suaeda salsa ... [more]
METK_PINBN5.994e-6193.28S-adenosylmethionine synthetase OS=Pinus banksiana... [more]
METK_MUSAC5.994e-6192.37S-adenosylmethionine synthetase OS=Musa acuminata ... [more]
METK2_TOBAC5.994e-6193.28S-adenosylmethionine synthetase 2 OS=Nicotiana tab... [more]
METK2_POPTR5.994e-6194.12S-adenosylmethionine synthetase 2 OS=Populus trich... [more]
METK1_PETHY5.994e-6193.28S-adenosylmethionine synthetase 1 OS=Petunia hybri... [more]
METK2_ORYSJ7.828e-6194.92S-adenosylmethionine synthetase 2 OS=Oryza sativa ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_013F10_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_013_T7_F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885270 ID=CV885270; Name=CV885270; organism=Citrus sinensis; type=EST; length=395bp
AGTAAACTGCAGCTTCGGTTAATCAAATTAAAGAAAATGGAAACATTTCT
TTTCACATCAGAATCAGTGAACGAGGGTCACCCGGACAAGCTGTGTGACC
AAGTTTCGGACGCAGTACTGGACGCGTGTTTGGCTCAGGATCCTGACAGC
AAAGTTGCATGTGAAACATGCACAAAGACCAACATGGTCATGGTTTTTGG
AGAAATTACAACCAAGGCCAATGTGGATTACGAGAAAATCGTGCGTGATA
CATGCAGATCGATTGGGTTCACATCGGACGATGTGGGGCTTGATGCTGAT
CACTGCAAAGTTCTTGTTAATATTGAGCAGCAGAGCCCTGACATTGCTCA
GGGTGTTCATGGGCATCTCACAAAGCGGGCTGAGGAGATTGGTGC
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