CV885270

Overview
NameCV885270
Unique NameCV885270
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length395
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885270 vs. ExPASy Swiss-Prot
Match: METK2_SOLLC (S-adenosylmethionine synthetase 2 OS=Solanum lycopersicum GN=SAM2 PE=2 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 1.335e-60
Identity = 110/119 (92.44%), Postives = 115/119 (96.64%), Query Frame = 1
Query:   37 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRAEEIG 393
            METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDP+SKVACETCTKTN+VMVFGEITTKAN+DYEKIVRDTCR IGF S DVGLDAD+C+VLVNIEQQSPDIAQGVHGHLTKR EEIG
Sbjct:    1 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPESKVACETCTKTNLVMVFGEITTKANIDYEKIVRDTCREIGFVSPDVGLDADNCRVLVNIEQQSPDIAQGVHGHLTKRPEEIG 119          
BLAST of CV885270 vs. ExPASy Swiss-Prot
Match: METK1_BRAJU (S-adenosylmethionine synthetase 1 OS=Brassica juncea GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 1.335e-60
Identity = 111/119 (93.28%), Postives = 113/119 (94.96%), Query Frame = 1
Query:   37 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRAEEIG 393
            METFLFTSESVNEGHPDKLCDQ+SDAVLDACL QDPDSKVACETCTKTNMVMVFGEITTKA VDYEKIVRDTCRSIGF SDDVGLDAD CKVLVNIEQQSPDIAQGVHGH TKR E+IG
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKATVDYEKIVRDTCRSIGFISDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEDIG 119          
BLAST of CV885270 vs. ExPASy Swiss-Prot
Match: METK3_PICSI (S-adenosylmethionine synthetase 3 OS=Picea sitchensis GN=METK3 PE=2 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 1.744e-60
Identity = 110/119 (92.44%), Postives = 113/119 (94.96%), Query Frame = 1
Query:   37 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRAEEIG 393
            METFLFTSESVNEGHPDKLCDQ+SDAVLDACL QDPDSKVACETCTKTNMVMVFGEITTKA+VDYE+IVR TCR IGF SDDVGLDADHCKVLVNIEQQSPDIAQGVHGH TKR EEIG
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLTQDPDSKVACETCTKTNMVMVFGEITTKADVDYEQIVRKTCREIGFISDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEEIG 119          
BLAST of CV885270 vs. ExPASy Swiss-Prot
Match: METK3_ORYSJ (S-adenosylmethionine synthetase 3 OS=Oryza sativa subsp. japonica GN=METK3 PE=2 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 1.744e-60
Identity = 108/122 (88.52%), Postives = 117/122 (95.90%), Query Frame = 1
Query:   28 LKKMETFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRAEEIG 393
            + +++TFLFTSESVNEGHPDKLCDQ+SDAVLDACLA+DP+SKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCR IGF S+DVGLDA+HCKVLVNIEQQSPDIAQGVHGH TKR EEIG
Sbjct:    1 MAEVDTFLFTSESVNEGHPDKLCDQISDAVLDACLAEDPESKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRGIGFVSNDVGLDAEHCKVLVNIEQQSPDIAQGVHGHFTKRPEEIG 122          
BLAST of CV885270 vs. ExPASy Swiss-Prot
Match: METK2_PINCO (S-adenosylmethionine synthetase 2 OS=Pinus contorta GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 1.744e-60
Identity = 110/119 (92.44%), Postives = 113/119 (94.96%), Query Frame = 1
Query:   37 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRAEEIG 393
            METFLFTSESVNEGHPDKLCDQ+SDAVLDACL QDPDSKVACETCTKTNMVMVFGEITTKA+VDYE+IVR TCR IGF SDDVGLDADHCKVLVNIEQQSPDIAQGVHGH TKR EEIG
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLTQDPDSKVACETCTKTNMVMVFGEITTKADVDYEQIVRKTCREIGFISDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEEIG 119          
BLAST of CV885270 vs. ExPASy Swiss-Prot
Match: METK2_ARATH (S-adenosylmethionine synthetase 2 OS=Arabidopsis thaliana GN=SAM2 PE=1 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 1.744e-60
Identity = 110/119 (92.44%), Postives = 113/119 (94.96%), Query Frame = 1
Query:   37 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRAEEIG 393
            METFLFTSESVNEGHPDKLCDQ+SDAVLDACL QDPDSKVACETCTKTNMVMVFGEITTKA +DYEKIVRDTCRSIGF SDDVGLDAD CKVLVNIEQQSPDIAQGVHGH TKR E+IG
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKATIDYEKIVRDTCRSIGFISDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEDIG 119          
BLAST of CV885270 vs. ExPASy Swiss-Prot
Match: METK_DENCR (S-adenosylmethionine synthetase OS=Dendrobium crumenatum GN=SAMS PE=2 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 2.278e-60
Identity = 107/122 (87.70%), Postives = 117/122 (95.90%), Query Frame = 1
Query:   28 LKKMETFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRAEEIG 393
            + +++TFLFTSESVNEGHPDKLCDQ+SDA+LDACL QDPDSKVACETC+KTNMVM+FGEITTKANVDYEKIVRDTCR+IGF SDDVGLDAD+CKVLVNIEQQSPDIAQGVHGH TKR EEIG
Sbjct:    1 MAEVDTFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCSKTNMVMIFGEITTKANVDYEKIVRDTCRAIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHFTKRPEEIG 122          
BLAST of CV885270 vs. ExPASy Swiss-Prot
Match: METK4_VITVI (S-adenosylmethionine synthetase 4 OS=Vitis vinifera GN=METK4 PE=3 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 2.278e-60
Identity = 107/119 (89.92%), Postives = 116/119 (97.48%), Query Frame = 1
Query:   37 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRAEEIG 393
            M+TFLFTSESVNEGHPDKLCDQ+SDAVLDACL QDPDSKVACETCTKTN+VM+FGEITTKAN+DYEKIVRDTCR++GF S+DVGLDAD+CKVLVNIEQQSPDIAQGVHGHLTKR EEIG
Sbjct:    1 MDTFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNLVMIFGEITTKANLDYEKIVRDTCRAVGFVSEDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIG 119          
BLAST of CV885270 vs. ExPASy Swiss-Prot
Match: METK2_PETHY (S-adenosylmethionine synthetase 2 OS=Petunia hybrida GN=SAM2 PE=2 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 2.278e-60
Identity = 110/119 (92.44%), Postives = 114/119 (95.80%), Query Frame = 1
Query:   37 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRAEEIG 393
            METFLFTSESVNEGHPDKLCDQVSDA+LDACL QDP+SKVACETCTKT+MVMVFGEITTKA VDYEKIVRDTCR IGFTS DVGLDADHCKVLVNIEQQSPDIAQGVHGHLTK+ EEIG
Sbjct:    1 METFLFTSESVNEGHPDKLCDQVSDAILDACLEQDPESKVACETCTKTSMVMVFGEITTKATVDYEKIVRDTCRGIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKKPEEIG 119          
BLAST of CV885270 vs. ExPASy Swiss-Prot
Match: METK_POPDE (S-adenosylmethionine synthetase OS=Populus deltoides GN=METK PE=2 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 2.975e-60
Identity = 110/118 (93.22%), Postives = 115/118 (97.46%), Query Frame = 1
Query:   40 ETFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRAEEIG 393
            ETFLFTSESVNEGHPDKLCDQ+SDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKA+VDYEKIVRDTCR+IGFTS DVGLDAD+CKVLVNIEQQSPDIAQGVHGH +KR EEIG
Sbjct:    3 ETFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKADVDYEKIVRDTCRNIGFTSADVGLDADNCKVLVNIEQQSPDIAQGVHGHFSKRPEEIG 120          
The following BLAST results are available for this feature:
BLAST of CV885270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK2_SOLLC1.335e-6092.44S-adenosylmethionine synthetase 2 OS=Solanum lycop... [more]
METK1_BRAJU1.335e-6093.28S-adenosylmethionine synthetase 1 OS=Brassica junc... [more]
METK3_PICSI1.744e-6092.44S-adenosylmethionine synthetase 3 OS=Picea sitchen... [more]
METK3_ORYSJ1.744e-6088.52S-adenosylmethionine synthetase 3 OS=Oryza sativa ... [more]
METK2_PINCO1.744e-6092.44S-adenosylmethionine synthetase 2 OS=Pinus contort... [more]
METK2_ARATH1.744e-6092.44S-adenosylmethionine synthetase 2 OS=Arabidopsis t... [more]
METK_DENCR2.278e-6087.70S-adenosylmethionine synthetase OS=Dendrobium crum... [more]
METK4_VITVI2.278e-6089.92S-adenosylmethionine synthetase 4 OS=Vitis vinifer... [more]
METK2_PETHY2.278e-6092.44S-adenosylmethionine synthetase 2 OS=Petunia hybri... [more]
METK_POPDE2.975e-6093.22S-adenosylmethionine synthetase OS=Populus deltoid... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_013F10_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_013_T7_F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885270 ID=CV885270; Name=CV885270; organism=Citrus sinensis; type=EST; length=395bp
AGTAAACTGCAGCTTCGGTTAATCAAATTAAAGAAAATGGAAACATTTCT
TTTCACATCAGAATCAGTGAACGAGGGTCACCCGGACAAGCTGTGTGACC
AAGTTTCGGACGCAGTACTGGACGCGTGTTTGGCTCAGGATCCTGACAGC
AAAGTTGCATGTGAAACATGCACAAAGACCAACATGGTCATGGTTTTTGG
AGAAATTACAACCAAGGCCAATGTGGATTACGAGAAAATCGTGCGTGATA
CATGCAGATCGATTGGGTTCACATCGGACGATGTGGGGCTTGATGCTGAT
CACTGCAAAGTTCTTGTTAATATTGAGCAGCAGAGCCCTGACATTGCTCA
GGGTGTTCATGGGCATCTCACAAAGCGGGCTGAGGAGATTGGTGC
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