CV885270

Overview
NameCV885270
Unique NameCV885270
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length395
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885270 vs. ExPASy Swiss-Prot
Match: METK_SYNJA (S-adenosylmethionine synthetase OS=Synechococcus sp. (strain JA-3-3Ab) GN=metK PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.141e-27
Identity = 58/113 (51.33%), Postives = 80/113 (70.80%), Query Frame = 1
Query:   49 LFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRAEE 387
            +F+SESV EGHPDK+CDQ+SDA++DA L  DP S+VA E    T MV++ GEIT++A+V++ ++VRD    IG+T    G  A+ C VLV  ++QSPDIAQGV+  L  R  +
Sbjct:    1 MFSSESVTEGHPDKICDQISDAIVDALLTADPLSRVAAEVVVNTGMVILTGEITSQAHVNFTRLVRDKVAEIGYTDAKNGFSAESCAVLVAFDEQSPDIAQGVNLALESRTSQ 113          
BLAST of CV885270 vs. ExPASy Swiss-Prot
Match: METK_STRZT (S-adenosylmethionine synthetase OS=Streptococcus pneumoniae (strain Taiwan19F-14) GN=metK PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.141e-27
Identity = 62/113 (54.87%), Postives = 80/113 (70.80%), Query Frame = 1
Query:   40 ETFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKR 378
            E  LFTSESV+EGHPDK+ DQ+SDA+LDA LA+DP++ VA ET   T  V VFGEI+T A VD  ++VRDT   IG+T+ + G  A+   V  ++ +QSPDIAQGV+  L  R
Sbjct:    3 ERKLFTSESVSEGHPDKIADQISDAILDAILAKDPEAHVAAETAVYTGSVHVFGEISTNAYVDINRVVRDTIAEIGYTNTEYGFSAETVGVHPSLVEQSPDIAQGVNEALEVR 115          
BLAST of CV885270 vs. ExPASy Swiss-Prot
Match: METK_STRZP (S-adenosylmethionine synthetase OS=Streptococcus pneumoniae (strain P1031) GN=metK PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.141e-27
Identity = 62/113 (54.87%), Postives = 80/113 (70.80%), Query Frame = 1
Query:   40 ETFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKR 378
            E  LFTSESV+EGHPDK+ DQ+SDA+LDA LA+DP++ VA ET   T  V VFGEI+T A VD  ++VRDT   IG+T+ + G  A+   V  ++ +QSPDIAQGV+  L  R
Sbjct:    3 ERKLFTSESVSEGHPDKIADQISDAILDAILAKDPEAHVAAETAVYTGSVHVFGEISTNAYVDINRVVRDTIAEIGYTNTEYGFSAETVGVHPSLVEQSPDIAQGVNEALEVR 115          
BLAST of CV885270 vs. ExPASy Swiss-Prot
Match: METK_STRZJ (S-adenosylmethionine synthetase OS=Streptococcus pneumoniae (strain JJA) GN=metK PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.141e-27
Identity = 62/113 (54.87%), Postives = 80/113 (70.80%), Query Frame = 1
Query:   40 ETFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKR 378
            E  LFTSESV+EGHPDK+ DQ+SDA+LDA LA+DP++ VA ET   T  V VFGEI+T A VD  ++VRDT   IG+T+ + G  A+   V  ++ +QSPDIAQGV+  L  R
Sbjct:    3 ERKLFTSESVSEGHPDKIADQISDAILDAILAKDPEAHVAAETAVYTGSVHVFGEISTNAYVDINRVVRDTIAEIGYTNTEYGFSAETVGVHPSLVEQSPDIAQGVNEALEVR 115          
BLAST of CV885270 vs. ExPASy Swiss-Prot
Match: METK_STRR6 (S-adenosylmethionine synthetase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=metK PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.141e-27
Identity = 62/113 (54.87%), Postives = 80/113 (70.80%), Query Frame = 1
Query:   40 ETFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKR 378
            E  LFTSESV+EGHPDK+ DQ+SDA+LDA LA+DP++ VA ET   T  V VFGEI+T A VD  ++VRDT   IG+T+ + G  A+   V  ++ +QSPDIAQGV+  L  R
Sbjct:    3 ERKLFTSESVSEGHPDKIADQISDAILDAILAKDPEAHVAAETAVYTGSVHVFGEISTNAYVDINRVVRDTIAEIGYTNTEYGFSAETVGVHPSLVEQSPDIAQGVNEALEVR 115          
BLAST of CV885270 vs. ExPASy Swiss-Prot
Match: METK_STRPZ (S-adenosylmethionine synthetase OS=Streptococcus pyogenes serotype M49 (strain NZ131) GN=metK PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.141e-27
Identity = 61/113 (53.98%), Postives = 79/113 (69.91%), Query Frame = 1
Query:   40 ETFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKR 378
            E  LFTSESV+EGHPDK+ DQ+SDA+LDA LA+DP++ VA ETC  T  V VFGEI+T A +D  ++VRDT   IG+T  + G  A+   V  ++ +QS DIAQGV+  L  R
Sbjct:    3 ERKLFTSESVSEGHPDKIADQISDAILDAILAEDPEAHVAAETCVYTGSVHVFGEISTTAYIDINRVVRDTIAEIGYTEAEYGFSAESVGVHPSLVEQSGDIAQGVNEALESR 115          
BLAST of CV885270 vs. ExPASy Swiss-Prot
Match: METK_STRPS (S-adenosylmethionine synthetase OS=Streptococcus pneumoniae (strain CGSP14) GN=metK PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.141e-27
Identity = 62/113 (54.87%), Postives = 80/113 (70.80%), Query Frame = 1
Query:   40 ETFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKR 378
            E  LFTSESV+EGHPDK+ DQ+SDA+LDA LA+DP++ VA ET   T  V VFGEI+T A VD  ++VRDT   IG+T+ + G  A+   V  ++ +QSPDIAQGV+  L  R
Sbjct:    3 ERKLFTSESVSEGHPDKIADQISDAILDAILAKDPEAHVAAETAVYTGSVHVFGEISTNAYVDINRVVRDTIAEIGYTNTEYGFSAETVGVHPSLVEQSPDIAQGVNEALEVR 115          
BLAST of CV885270 vs. ExPASy Swiss-Prot
Match: METK_STRPN (S-adenosylmethionine synthetase OS=Streptococcus pneumoniae GN=metK PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.141e-27
Identity = 62/113 (54.87%), Postives = 80/113 (70.80%), Query Frame = 1
Query:   40 ETFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKR 378
            E  LFTSESV+EGHPDK+ DQ+SDA+LDA LA+DP++ VA ET   T  V VFGEI+T A VD  ++VRDT   IG+T+ + G  A+   V  ++ +QSPDIAQGV+  L  R
Sbjct:    3 ERKLFTSESVSEGHPDKIADQISDAILDAILAKDPEAHVAAETAVYTGSVHVFGEISTNAYVDINRVVRDTIAEIGYTNTEYGFSAETVGVHPSLVEQSPDIAQGVNEALEVR 115          
BLAST of CV885270 vs. ExPASy Swiss-Prot
Match: METK_STRPJ (S-adenosylmethionine synthetase OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=metK PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.141e-27
Identity = 62/113 (54.87%), Postives = 80/113 (70.80%), Query Frame = 1
Query:   40 ETFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKR 378
            E  LFTSESV+EGHPDK+ DQ+SDA+LDA LA+DP++ VA ET   T  V VFGEI+T A VD  ++VRDT   IG+T+ + G  A+   V  ++ +QSPDIAQGV+  L  R
Sbjct:    3 ERKLFTSESVSEGHPDKIADQISDAILDAILAKDPEAHVAAETAVYTGSVHVFGEISTNAYVDINRVVRDTIAEIGYTNTEYGFSAETVGVHPSLVEQSPDIAQGVNEALEVR 115          
BLAST of CV885270 vs. ExPASy Swiss-Prot
Match: METK_STRPI (S-adenosylmethionine synthetase OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=metK PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.141e-27
Identity = 62/113 (54.87%), Postives = 80/113 (70.80%), Query Frame = 1
Query:   40 ETFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKR 378
            E  LFTSESV+EGHPDK+ DQ+SDA+LDA LA+DP++ VA ET   T  V VFGEI+T A VD  ++VRDT   IG+T+ + G  A+   V  ++ +QSPDIAQGV+  L  R
Sbjct:    3 ERKLFTSESVSEGHPDKIADQISDAILDAILAKDPEAHVAAETAVYTGSVHVFGEISTNAYVDINRVVRDTIAEIGYTNTEYGFSAETVGVHPSLVEQSPDIAQGVNEALEVR 115          
The following BLAST results are available for this feature:
BLAST of CV885270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_SYNJA1.141e-2751.33S-adenosylmethionine synthetase OS=Synechococcus s... [more]
METK_STRZT1.141e-2754.87S-adenosylmethionine synthetase OS=Streptococcus p... [more]
METK_STRZP1.141e-2754.87S-adenosylmethionine synthetase OS=Streptococcus p... [more]
METK_STRZJ1.141e-2754.87S-adenosylmethionine synthetase OS=Streptococcus p... [more]
METK_STRR61.141e-2754.87S-adenosylmethionine synthetase OS=Streptococcus p... [more]
METK_STRPZ1.141e-2753.98S-adenosylmethionine synthetase OS=Streptococcus p... [more]
METK_STRPS1.141e-2754.87S-adenosylmethionine synthetase OS=Streptococcus p... [more]
METK_STRPN1.141e-2754.87S-adenosylmethionine synthetase OS=Streptococcus p... [more]
METK_STRPJ1.141e-2754.87S-adenosylmethionine synthetase OS=Streptococcus p... [more]
METK_STRPI1.141e-2754.87S-adenosylmethionine synthetase OS=Streptococcus p... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_013F10_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_013_T7_F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885270 ID=CV885270; Name=CV885270; organism=Citrus sinensis; type=EST; length=395bp
AGTAAACTGCAGCTTCGGTTAATCAAATTAAAGAAAATGGAAACATTTCT
TTTCACATCAGAATCAGTGAACGAGGGTCACCCGGACAAGCTGTGTGACC
AAGTTTCGGACGCAGTACTGGACGCGTGTTTGGCTCAGGATCCTGACAGC
AAAGTTGCATGTGAAACATGCACAAAGACCAACATGGTCATGGTTTTTGG
AGAAATTACAACCAAGGCCAATGTGGATTACGAGAAAATCGTGCGTGATA
CATGCAGATCGATTGGGTTCACATCGGACGATGTGGGGCTTGATGCTGAT
CACTGCAAAGTTCTTGTTAATATTGAGCAGCAGAGCCCTGACATTGCTCA
GGGTGTTCATGGGCATCTCACAAAGCGGGCTGAGGAGATTGGTGC
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