CV885270

Overview
NameCV885270
Unique NameCV885270
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length395
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885270 vs. ExPASy Swiss-Prot
Match: METK_MESCR (S-adenosylmethionine synthetase OS=Mesembryanthemum crystallinum GN=METK PE=2 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 3.289e-59
Identity = 108/119 (90.76%), Postives = 114/119 (95.80%), Query Frame = 1
Query:   37 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRAEEIG 393
            M+TFLFTSESVNEGHPDKLCDQ+SDAVLDACLAQD +SKVACETCTKTN+VMVFGEITTKANVDYEKI RDTCR+IGF SDDVGLDAD+CKVLV IEQQSPDIAQGVHGHLTKR EEIG
Sbjct:    1 MDTFLFTSESVNEGHPDKLCDQISDAVLDACLAQDAESKVACETCTKTNLVMVFGEITTKANVDYEKIARDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLTKRPEEIG 119          
BLAST of CV885270 vs. ExPASy Swiss-Prot
Match: METK3_ATRNU (S-adenosylmethionine synthetase 3 OS=Atriplex nummularia GN=SAMS3 PE=1 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 5.610e-59
Identity = 107/119 (89.92%), Postives = 114/119 (95.80%), Query Frame = 1
Query:   37 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRAEEIG 393
            ++TFLFTSESVNEGHPDKLCDQ+SDAVLDACLAQDP+SKVACETCTKTN+VMVFGEITTKANVDYEKIVR TCR IGF S DVGLDAD+CKVLVNIEQQSPDIAQGVHGHLT+R EEIG
Sbjct:    5 VDTFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPESKVACETCTKTNLVMVFGEITTKANVDYEKIVRQTCRDIGFVSADVGLDADNCKVLVNIEQQSPDIAQGVHGHLTRRPEEIG 123          
BLAST of CV885270 vs. ExPASy Swiss-Prot
Match: METK1_VITVI (S-adenosylmethionine synthetase 1 OS=Vitis vinifera GN=METK1 PE=3 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 1.250e-58
Identity = 107/119 (89.92%), Postives = 113/119 (94.96%), Query Frame = 1
Query:   37 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRAEEIG 393
            M+TFLFTSESVNEGHPDKLCDQVSDA+LDACL QDP+SKVACETCTKTNMVMVFGEITTKA V+YEKIVRDTCR IGF S DVGLDAD+CKVLVNIEQQSPDIAQGVHGHLTK+ EEIG
Sbjct:    1 MDTFLFTSESVNEGHPDKLCDQVSDAILDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVNYEKIVRDTCRGIGFVSADVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKKPEEIG 119          
BLAST of CV885270 vs. ExPASy Swiss-Prot
Match: METK1_DAUCA (S-adenosylmethionine synthetase 1 OS=Daucus carota GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 2.132e-58
Identity = 106/119 (89.08%), Postives = 112/119 (94.12%), Query Frame = 1
Query:   37 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRAEEIG 393
            M+TFL+TSESVNEGHPDKLCDQ+SDAVLDACL QDPDSKVACETC+KTNMVMVFGEITTKANVDYEKIV  TCR IGF SDDVGLDAD+CKVLV IEQQSPDIAQGVHGHLTKR E+IG
Sbjct:    1 MDTFLYTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCSKTNMVMVFGEITTKANVDYEKIVHKTCRDIGFVSDDVGLDADNCKVLVQIEQQSPDIAQGVHGHLTKRPEDIG 119          
BLAST of CV885270 vs. ExPASy Swiss-Prot
Match: METK4_ARATH (S-adenosylmethionine synthetase 4 OS=Arabidopsis thaliana GN=METK4 PE=1 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 2.784e-58
Identity = 105/119 (88.24%), Postives = 113/119 (94.96%), Query Frame = 1
Query:   37 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRAEEIG 393
            ME+FLFTSESVNEGHPDKLCDQ+SDA+LDACL QDP+SKVACETCTKTNMVMVFGEITTKANVDYE+IVR TCR IGF S DVGLDAD+CKVLVNIEQQSPDIAQGVHGHLTK+ EE+G
Sbjct:    1 MESFLFTSESVNEGHPDKLCDQISDAILDACLEQDPESKVACETCTKTNMVMVFGEITTKANVDYEQIVRKTCREIGFVSADVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKKPEEVG 119          
BLAST of CV885270 vs. ExPASy Swiss-Prot
Match: METK3_VITVI (S-adenosylmethionine synthetase 3 OS=Vitis vinifera GN=METK3 PE=3 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 2.784e-58
Identity = 106/119 (89.08%), Postives = 113/119 (94.96%), Query Frame = 1
Query:   37 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRAEEIG 393
            M+TFLFTSESVNEGHPDKLCDQVSDA+LDACL QDP+SKVACETC+KTNMVMVFGEITTKA VDYEKIVRDTCR IGF S DVGLDAD+CKVLVNIEQQSPDIAQGVHGHL+K+ EEIG
Sbjct:    1 MDTFLFTSESVNEGHPDKLCDQVSDAILDACLEQDPESKVACETCSKTNMVMVFGEITTKAKVDYEKIVRDTCRGIGFVSADVGLDADNCKVLVNIEQQSPDIAQGVHGHLSKKPEEIG 119          
BLAST of CV885270 vs. ExPASy Swiss-Prot
Match: METK2_DAUCA (S-adenosylmethionine synthetase 2 OS=Daucus carota GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 2.784e-58
Identity = 107/119 (89.92%), Postives = 112/119 (94.12%), Query Frame = 1
Query:   37 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRAEEIG 393
            M+TFL TSESVNEGHPDKLCDQ+SDAVLDACL QDPDSKVACETC+KTNMVMVFGEITTKANVDYEKIVR TCR IGF SDDVGLDAD+CKVLV IEQQSPDIAQGVHGHLTKR E+IG
Sbjct:    1 MDTFLNTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCSKTNMVMVFGEITTKANVDYEKIVRKTCRDIGFVSDDVGLDADNCKVLVQIEQQSPDIAQGVHGHLTKRPEDIG 119          
BLAST of CV885270 vs. ExPASy Swiss-Prot
Match: METK4_ATRNU (S-adenosylmethionine synthetase 4 OS=Atriplex nummularia GN=SAMS4 PE=1 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 4.749e-58
Identity = 106/119 (89.08%), Postives = 113/119 (94.96%), Query Frame = 1
Query:   37 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRAEEIG 393
            ++TFLFTSESVNEGHPDKLCDQ+SDAVLDACLAQDP+SKVACETCTKTN+VMVFGEITTKANVDYEKIVR TCR IGF S DVGLDAD+CKVLV IEQQSPDIAQGVHGHLT+R EEIG
Sbjct:    5 VDTFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPESKVACETCTKTNLVMVFGEITTKANVDYEKIVRQTCRDIGFVSADVGLDADNCKVLVYIEQQSPDIAQGVHGHLTRRPEEIG 123          
BLAST of CV885270 vs. ExPASy Swiss-Prot
Match: METK3_HORVU (S-adenosylmethionine synthetase 3 OS=Hordeum vulgare GN=SAM3 PE=2 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 6.202e-58
Identity = 108/118 (91.53%), Postives = 110/118 (93.22%), Query Frame = 1
Query:   40 ETFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRAEEIG 393
            ETFLFTSESVNEGHPDKLCDQVSDAVLDACLAQD DSKVACET TKTNMVMV GEITTKA VDYEKIVRDTCR+IGF SDDVGLDAD CKVLVNIEQQSPDIAQGVHGH TKR EE+G
Sbjct:    4 ETFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDADSKVACETVTKTNMVMVLGEITTKATVDYEKIVRDTCRNIGFISDDVGLDADRCKVLVNIEQQSPDIAQGVHGHFTKRPEEVG 121          
BLAST of CV885270 vs. ExPASy Swiss-Prot
Match: METK1_BETVU (S-adenosylmethionine synthetase 1 OS=Beta vulgaris GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 1.058e-57
Identity = 105/119 (88.24%), Postives = 112/119 (94.12%), Query Frame = 1
Query:   37 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRAEEIG 393
            ++TFLFTSESVNEGHPDK+CDQ+SDAVLDACLAQDP+SKVACETCTKTN+VMVFGEITTK NVDYEKIVR TCR IGF S DVGLDAD+CKVLV IEQQSPDIAQGVHGHLTKR EEIG
Sbjct:    5 IDTFLFTSESVNEGHPDKMCDQISDAVLDACLAQDPESKVACETCTKTNLVMVFGEITTKGNVDYEKIVRQTCRDIGFVSADVGLDADNCKVLVYIEQQSPDIAQGVHGHLTKRPEEIG 123          
The following BLAST results are available for this feature:
BLAST of CV885270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_MESCR3.289e-5990.76S-adenosylmethionine synthetase OS=Mesembryanthemu... [more]
METK3_ATRNU5.610e-5989.92S-adenosylmethionine synthetase 3 OS=Atriplex numm... [more]
METK1_VITVI1.250e-5889.92S-adenosylmethionine synthetase 1 OS=Vitis vinifer... [more]
METK1_DAUCA2.132e-5889.08S-adenosylmethionine synthetase 1 OS=Daucus carota... [more]
METK4_ARATH2.784e-5888.24S-adenosylmethionine synthetase 4 OS=Arabidopsis t... [more]
METK3_VITVI2.784e-5889.08S-adenosylmethionine synthetase 3 OS=Vitis vinifer... [more]
METK2_DAUCA2.784e-5889.92S-adenosylmethionine synthetase 2 OS=Daucus carota... [more]
METK4_ATRNU4.749e-5889.08S-adenosylmethionine synthetase 4 OS=Atriplex numm... [more]
METK3_HORVU6.202e-5891.53S-adenosylmethionine synthetase 3 OS=Hordeum vulga... [more]
METK1_BETVU1.058e-5788.24S-adenosylmethionine synthetase 1 OS=Beta vulgaris... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_013F10_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_013_T7_F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885270 ID=CV885270; Name=CV885270; organism=Citrus sinensis; type=EST; length=395bp
AGTAAACTGCAGCTTCGGTTAATCAAATTAAAGAAAATGGAAACATTTCT
TTTCACATCAGAATCAGTGAACGAGGGTCACCCGGACAAGCTGTGTGACC
AAGTTTCGGACGCAGTACTGGACGCGTGTTTGGCTCAGGATCCTGACAGC
AAAGTTGCATGTGAAACATGCACAAAGACCAACATGGTCATGGTTTTTGG
AGAAATTACAACCAAGGCCAATGTGGATTACGAGAAAATCGTGCGTGATA
CATGCAGATCGATTGGGTTCACATCGGACGATGTGGGGCTTGATGCTGAT
CACTGCAAAGTTCTTGTTAATATTGAGCAGCAGAGCCCTGACATTGCTCA
GGGTGTTCATGGGCATCTCACAAAGCGGGCTGAGGAGATTGGTGC
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