CV885270

Overview
NameCV885270
Unique NameCV885270
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length395
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885270 vs. ExPASy Swiss-Prot
Match: METK1_YEAST (S-adenosylmethionine synthetase 1 OS=Saccharomyces cerevisiae GN=SAM1 PE=1 SV=2)

HSP 1 Score: 167.162 bits (422), Expect = 2.368e-41
Identity = 83/117 (70.94%), Postives = 92/117 (78.63%), Query Frame = 1
Query:   43 TFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRAEEIG 393
            TFLFTSESV EGHPDK+CDQVSDA+LDACLA+DP SKVACET  KT M+MVFGEITTKA +DY+KIVRDT + IG+     G D   C VLV IEQQSPDIAQGVH    K  E+IG
Sbjct:    4 TFLFTSESVGEGHPDKICDQVSDAILDACLAEDPHSKVACETAAKTGMIMVFGEITTKAQLDYQKIVRDTIKKIGYDDSAKGFDYKTCNVLVAIEQQSPDIAQGVHEE--KDLEDIG 118          
BLAST of CV885270 vs. ExPASy Swiss-Prot
Match: METK_DICDI (S-adenosylmethionine synthetase OS=Dictyostelium discoideum GN=metK PE=1 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 8.998e-41
Identity = 79/108 (73.15%), Postives = 88/108 (81.48%), Query Frame = 1
Query:   37 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSDDVGLDADHCKVLVNIEQQSPDIAQGVH 360
            M ++LFTSESV EGHPDK+CDQVSDAVLDACLAQDP SKVACET TKT MVM+ GEITTKANVDY+K+VR+  + IG+     G D   C VLV IEQQSPDIAQGVH
Sbjct:    1 MSSYLFTSESVTEGHPDKICDQVSDAVLDACLAQDPLSKVACETATKTGMVMILGEITTKANVDYQKVVREAVKKIGYDDSSKGFDYKTCNVLVAIEQQSPDIAQGVH 108          
BLAST of CV885270 vs. ExPASy Swiss-Prot
Match: METK2_YEAST (S-adenosylmethionine synthetase 2 OS=Saccharomyces cerevisiae GN=SAM2 PE=1 SV=3)

HSP 1 Score: 165.236 bits (417), Expect = 8.998e-41
Identity = 81/122 (66.39%), Postives = 94/122 (77.05%), Query Frame = 1
Query:   28 LKKMETFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRAEEIG 393
            + K +TFLFTSESV EGHPDK+CDQVSDA+LDACL QDP SKVACET  KT M+MVFGEITTKA +DY++IVRDT + IG+     G D   C VLV IEQQSPDIAQG+  H  K  E++G
Sbjct:    1 MSKSKTFLFTSESVGEGHPDKICDQVSDAILDACLEQDPFSKVACETAAKTGMIMVFGEITTKARLDYQQIVRDTIKKIGYDDSAKGFDYKTCNVLVAIEQQSPDIAQGL--HYEKSLEDLG 120          
BLAST of CV885270 vs. ExPASy Swiss-Prot
Match: METK_SCHPO (S-adenosylmethionine synthetase OS=Schizosaccharomyces pombe GN=sam1 PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 3.419e-40
Identity = 77/118 (65.25%), Postives = 94/118 (79.66%), Query Frame = 1
Query:   40 ETFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRAEEIG 393
            +TFLFTSESV EGHPDK+CDQ+SDA+LDACL  DP SKVACET +KT MVMVFGEITT++ +DY+K++R+T +SIG+   + G D   C VLV IEQQSPDIAQG+  H  K  EE+G
Sbjct:    3 QTFLFTSESVGEGHPDKICDQISDAILDACLKDDPFSKVACETASKTGMVMVFGEITTRSQIDYQKVIRNTIKSIGYDDSEKGFDYKTCNVLVAIEQQSPDIAQGL--HYEKALEELG 118          
BLAST of CV885270 vs. ExPASy Swiss-Prot
Match: METK_ACACA (S-adenosylmethionine synthetase OS=Acanthamoeba castellanii GN=metK PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 1.299e-39
Identity = 75/107 (70.09%), Postives = 88/107 (82.24%), Query Frame = 1
Query:   40 ETFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSDDVGLDADHCKVLVNIEQQSPDIAQGVH 360
            +T LFTSE V+E HPDKLCDQVSDA+LDACLA DP SKVACET +KT MVMVFGEITTK++ DY+K++R+T + IGFT   +G D   C +LV IEQQSPDIAQGVH
Sbjct:    5 KTLLFTSECVSESHPDKLCDQVSDAILDACLANDPYSKVACETASKTGMVMVFGEITTKSSFDYQKVIRETVKRIGFTDSSIGFDYKTCNILVAIEQQSPDIAQGVH 111          
BLAST of CV885270 vs. ExPASy Swiss-Prot
Match: METK_LEIIN (S-adenosylmethionine synthetase OS=Leishmania infantum GN=METK PE=2 SV=2)

HSP 1 Score: 159.073 bits (401), Expect = 6.448e-39
Identity = 78/107 (72.90%), Postives = 88/107 (82.24%), Query Frame = 1
Query:   37 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSDDVGLDADHCKVLVNIEQQSPDIAQGV 357
            + + LF+SE V EGHPDKLCDQVSDAVLDACLA DP SKVACE+C KT MVMVFGEITTKA +DY+KIVR+T + IGF S D GLD + C VLV IEQQSPDI QG+
Sbjct:    3 VHSILFSSEHVTEGHPDKLCDQVSDAVLDACLAGDPFSKVACESCAKTGMVMVFGEITTKAVLDYQKIVRNTIKDIGFDSADKGLDYESCNVLVAIEQQSPDICQGL 109          
BLAST of CV885270 vs. ExPASy Swiss-Prot
Match: METK_ASCIM (S-adenosylmethionine synthetase OS=Ascobolus immersus PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 6.448e-39
Identity = 79/117 (67.52%), Postives = 92/117 (78.63%), Query Frame = 1
Query:   43 TFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRAEEIG 393
            +FLFTSESV EGHPDK+ DQVSDAVLDACLA+DP SKVACET TKT M+MVFGEITTKA++DY+KI+R+  + IG+     G D   C VLV IEQQSPDIAQG+  H  K  EE+G
Sbjct:   13 SFLFTSESVGEGHPDKIADQVSDAVLDACLAEDPLSKVACETATKTGMIMVFGEITTKAHLDYQKIIRNAVKDIGYDDSAKGFDYKTCNVLVAIEQQSPDIAQGL--HYEKALEELG 127          
BLAST of CV885270 vs. ExPASy Swiss-Prot
Match: METK_NEUCR (S-adenosylmethionine synthetase OS=Neurospora crassa GN=eth-1 PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 1.100e-38
Identity = 77/117 (65.81%), Postives = 91/117 (77.78%), Query Frame = 1
Query:   43 TFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRAEEIG 393
            TFLFTSESV EGHPDK+ DQVSDA+LDACLA+DP SKVACET TKT M+MVFGEITTKA +DY+K+VR+  + IG+     G D   C +LV IE+QSPDIAQG+  HL  R E +G
Sbjct:   16 TFLFTSESVGEGHPDKIADQVSDAILDACLAEDPLSKVACETATKTGMIMVFGEITTKAKLDYQKVVRNAIKDIGYDDSSKGFDYKTCNLLVAIEEQSPDIAQGL--HLDDRLENLG 130          
BLAST of CV885270 vs. ExPASy Swiss-Prot
Match: METK2_PONAB (S-adenosylmethionine synthetase isoform type-2 OS=Pongo abelii GN=MAT2A PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 6.035e-37
Identity = 74/117 (63.25%), Postives = 90/117 (76.92%), Query Frame = 1
Query:   43 TFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRAEEIG 393
            TFLFTSESV EGHPDK+CDQ+SDAVLDA L QDPD+KVACET  KT M+++ GEIT++A VDY+K+VR+  + IG+     G D   C VLV +EQQSPDIAQGV  HL +  E+IG
Sbjct:   17 TFLFTSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACETVAKTGMILLAGEITSRAAVDYQKVVREAVKHIGYDDSSKGFDYKTCNVLVALEQQSPDIAQGV--HLDRNEEDIG 131          
BLAST of CV885270 vs. ExPASy Swiss-Prot
Match: METK2_MACFA (S-adenosylmethionine synthetase isoform type-2 OS=Macaca fascicularis GN=MAT2A PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 6.035e-37
Identity = 74/117 (63.25%), Postives = 90/117 (76.92%), Query Frame = 1
Query:   43 TFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRAEEIG 393
            TFLFTSESV EGHPDK+CDQ+SDAVLDA L QDPD+KVACET  KT M+++ GEIT++A VDY+K+VR+  + IG+     G D   C VLV +EQQSPDIAQGV  HL +  E+IG
Sbjct:   17 TFLFTSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACETVAKTGMILLAGEITSRAAVDYQKVVREAVKHIGYDDSSKGFDYKTCNVLVALEQQSPDIAQGV--HLDRNEEDIG 131          
The following BLAST results are available for this feature:
BLAST of CV885270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK1_YEAST2.368e-4170.94S-adenosylmethionine synthetase 1 OS=Saccharomyces... [more]
METK_DICDI8.998e-4173.15S-adenosylmethionine synthetase OS=Dictyostelium d... [more]
METK2_YEAST8.998e-4166.39S-adenosylmethionine synthetase 2 OS=Saccharomyces... [more]
METK_SCHPO3.419e-4065.25S-adenosylmethionine synthetase OS=Schizosaccharom... [more]
METK_ACACA1.299e-3970.09S-adenosylmethionine synthetase OS=Acanthamoeba ca... [more]
METK_LEIIN6.448e-3972.90S-adenosylmethionine synthetase OS=Leishmania infa... [more]
METK_ASCIM6.448e-3967.52S-adenosylmethionine synthetase OS=Ascobolus immer... [more]
METK_NEUCR1.100e-3865.81S-adenosylmethionine synthetase OS=Neurospora cras... [more]
METK2_PONAB6.035e-3763.25S-adenosylmethionine synthetase isoform type-2 OS=... [more]
METK2_MACFA6.035e-3763.25S-adenosylmethionine synthetase isoform type-2 OS=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_013F10_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_013_T7_F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885270 ID=CV885270; Name=CV885270; organism=Citrus sinensis; type=EST; length=395bp
AGTAAACTGCAGCTTCGGTTAATCAAATTAAAGAAAATGGAAACATTTCT
TTTCACATCAGAATCAGTGAACGAGGGTCACCCGGACAAGCTGTGTGACC
AAGTTTCGGACGCAGTACTGGACGCGTGTTTGGCTCAGGATCCTGACAGC
AAAGTTGCATGTGAAACATGCACAAAGACCAACATGGTCATGGTTTTTGG
AGAAATTACAACCAAGGCCAATGTGGATTACGAGAAAATCGTGCGTGATA
CATGCAGATCGATTGGGTTCACATCGGACGATGTGGGGCTTGATGCTGAT
CACTGCAAAGTTCTTGTTAATATTGAGCAGCAGAGCCCTGACATTGCTCA
GGGTGTTCATGGGCATCTCACAAAGCGGGCTGAGGAGATTGGTGC
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