CV885269

Overview
NameCV885269
Unique NameCV885269
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length824
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885269 vs. ExPASy Swiss-Prot
Match: METK_CHLAA (S-adenosylmethionine synthetase OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=metK PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.584e-49
Identity = 104/181 (57.46%), Postives = 127/181 (70.17%), Query Frame = -1
Query:  282 VTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 824
            +T D+I ADL +HVIK  IP+ +LD +T   +NP+GRFVIGGP GD+GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA+GLARR  +QVSYAIGV  PLS+ V+++GT  +PD+ ILK V E FD RPG I  +LDL+R     + KTAA GHFGR D D  WE
Sbjct:  212 ITQDQIRADLIEHVIKTEIPEAWLDSQTKIFINPTGRFVIGGPMGDSGLTGRKIIVDTYGGVARHGGGAFSGKDPSKVDRSAAYACRWVAKNIVAAGLARRVELQVSYAIGVARPLSLSVETFGTAAVPDEVILKAVNEVFDLRPGAIIRDLDLRR---PIYRKTAAGGHFGRTDIDLPWE 389          
BLAST of CV885269 vs. ExPASy Swiss-Prot
Match: METK1_BOVIN (S-adenosylmethionine synthetase isoform type-1 OS=Bos taurus GN=MAT1A PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.584e-49
Identity = 101/186 (54.30%), Postives = 131/186 (70.43%), Query Frame = -1
Query:  267 VTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEIVKPL 824
            +T +++   LK+ VI+ V+P +YLD+ TI+HL PSGRFVIGGP GDAG+TGRKII+DTY            GKD TKVDRS AY  R  AKS+V +GL RR +VQVSYAIGV EPLS+ + +YGT +  ++E+L +V +NFD RPG+I  +LDLK+     + KTA YGHFGR   +F WE+ K L
Sbjct:  214 ITLEDMRRALKEQVIRAVVPARYLDEDTIYHLQPSGRFVIGGPQGDAGVTGRKIIVDTYGGWGAHGGGAFSGKDYTKVDRSAAYAARWVAKSLVKAGLCRRVLVQVSYAIGVAEPLSISIFTYGTSQKTERELLDVVNKNFDLRPGVIVRDLDLKK---PIYQKTACYGHFGRS--EFPWEVPKKL 394          
BLAST of CV885269 vs. ExPASy Swiss-Prot
Match: METK_NEIMB (S-adenosylmethionine synthetase OS=Neisseria meningitidis serogroup B GN=metK PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 2.069e-49
Identity = 96/181 (53.04%), Postives = 131/181 (72.38%), Query Frame = -1
Query:  282 VTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 824
            +  +E+   + +H+IKPV+P + L D+T + +NP+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA+GLA +C +QVSYAIGV EP S+ +D++GTGKI +++++ +V+E+FD RP  I   LDL R     + K+AAYGHFGR++P+FTWE
Sbjct:  198 IAYEELKNAVIEHIIKPVLPSELLTDETKYLINPTGRFVIGGPQGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYACRYVAKNIVAAGLATQCQIQVSYAIGVAEPTSISIDTFGTGKISEEKLIALVREHFDLRPKGIVQMLDLLR---PIYSKSAAYGHFGREEPEFTWE 375          
BLAST of CV885269 vs. ExPASy Swiss-Prot
Match: METK_CLOTH (S-adenosylmethionine synthetase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=metK PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 2.069e-49
Identity = 103/181 (56.91%), Postives = 127/181 (70.17%), Query Frame = -1
Query:  282 VTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 824
            V  D I  D+ +HVIKPVIP + LD KT + +NP+GRFVIGGP GD+GLTGRKII+DTY            GKDPTKVDRS AY  R  AK+IVA+GLAR+C VQ++YAIGV  P+SV VD++GTG IP+++I  +V + FD RP  I   LDL+R     + +TAAYGHFGR D D  WE
Sbjct:  205 VDYDTIKRDVIEHVIKPVIPAELLDSKTKYLVNPTGRFVIGGPQGDSGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARYVAKNIVAAGLARKCEVQLAYAIGVARPVSVRVDTFGTGIIPEEKIESLVNKYFDLRPAGIIKTLDLRR---PIYKQTAAYGHFGRTDIDLPWE 382          
BLAST of CV885269 vs. ExPASy Swiss-Prot
Match: METK_BACHK (S-adenosylmethionine synthetase OS=Bacillus thuringiensis subsp. konkukian GN=metK PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 2.069e-49
Identity = 100/181 (55.25%), Postives = 129/181 (71.27%), Query Frame = -1
Query:  282 VTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 824
            VT +EI  DLK+HVIK V+P + +D +T F +NP+GRFVIGGP GDAGLTGRKII+DTY            GKD TKVDRS AY  R  AK+IVA+GLA +  VQ++YAIGV +P+S+ VD++GTGK+ +  ++++V+ NFD RP  I   LDL+R     + +TAAYGHFGR D D TWE
Sbjct:  208 VTWEEIDRDLKEHVIKAVVPAELIDGETKFFINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDATKVDRSAAYAARYVAKNIVAAGLAEKAEVQLAYAIGVAQPVSISVDTFGTGKVSEDVLVELVRNNFDLRPAGIIKMLDLRR---PIYKQTAAYGHFGRTDVDLTWE 385          
BLAST of CV885269 vs. ExPASy Swiss-Prot
Match: METK_BACC7 (S-adenosylmethionine synthetase OS=Bacillus cereus (strain AH187) GN=metK PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 2.069e-49
Identity = 100/181 (55.25%), Postives = 129/181 (71.27%), Query Frame = -1
Query:  282 VTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 824
            VT +EI  DLK+HVIK V+P + +D +T F +NP+GRFVIGGP GDAGLTGRKII+DTY            GKD TKVDRS AY  R  AK+IVA+GLA +  VQ++YAIGV +P+S+ VD++GTGK+ +  ++++V+ NFD RP  I   LDL+R     + +TAAYGHFGR D D TWE
Sbjct:  208 VTWEEIDRDLKEHVIKAVVPAELIDGETKFFINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDATKVDRSAAYAARYVAKNIVAAGLAEKAEVQLAYAIGVAQPVSISVDTFGTGKVSEDVLVELVRNNFDLRPAGIIKMLDLRR---PIYKQTAAYGHFGRTDVDLTWE 385          
BLAST of CV885269 vs. ExPASy Swiss-Prot
Match: METK_DESHD (S-adenosylmethionine synthetase OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=metK PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 3.529e-49
Identity = 97/180 (53.89%), Postives = 127/180 (70.56%), Query Frame = -1
Query:  282 TNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 821
            T + I  DL +HV+ PV+P + LD+ T + +NP+GRFVIGGP GDAGLTGRKII+DTY            GKDPTKVDRS AY  R  AK++VA+GLA RC +Q++YAIGV +P+SV V+++GT KI +++I ++VK NFD RP  I   L+L+R     + +TAAYGHFGR D D  WE
Sbjct:  206 TQERIRRDLLEHVVFPVVPSELLDESTRYFINPTGRFVIGGPQGDAGLTGRKIIVDTYGGMARHGGGAFSGKDPTKVDRSAAYAARYVAKNVVAAGLAERCEIQLAYAIGVAQPVSVLVETFGTAKIDEEKIGELVKNNFDLRPAGIIKTLNLRR---PIYRQTAAYGHFGRTDLDLPWE 382          
BLAST of CV885269 vs. ExPASy Swiss-Prot
Match: METK1_RAT (S-adenosylmethionine synthetase isoform type-1 OS=Rattus norvegicus GN=Mat1a PE=1 SV=2)

HSP 1 Score: 195.282 bits (495), Expect = 3.529e-49
Identity = 104/187 (55.61%), Postives = 131/187 (70.05%), Query Frame = -1
Query:  267 VTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDK-EILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEIVKPL 824
            +T + +   LK+ VIK V+P KYLD+ TI+HL PSGRFVIGGP GDAG+TGRKII+DTY            GKD TKVDRS AY  R  AKS+V +GL RR +VQVSYAIGV EPLS+ + +YGT K  ++ E+L++V +NFD RPG+I  +LDLK+     + KTA YGHFGR   +F WE+ K L
Sbjct:  214 ITLEAMREALKEQVIKAVVPAKYLDEDTIYHLQPSGRFVIGGPQGDAGVTGRKIIVDTYGGWGAHGGGAFSGKDYTKVDRSAAYAARWVAKSLVKAGLCRRVLVQVSYAIGVAEPLSISIFTYGTSKKTERDELLEVVNKNFDLRPGVIVRDLDLKK---PIYQKTACYGHFGRS--EFPWEVPKKL 395          
BLAST of CV885269 vs. ExPASy Swiss-Prot
Match: METK_SYMTH (S-adenosylmethionine synthetase OS=Symbiobacterium thermophilum GN=metK PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 4.609e-49
Identity = 96/180 (53.33%), Postives = 126/180 (70.00%), Query Frame = -1
Query:  282 TNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 821
            T ++I  D+  +VI  V+    +DD+T + +NP+GRFV+GGP GD GLTGRKII+DTY            GKDPTKVDRSGAY  R  AK+IVA+GLAR+C VQV+YAIGV  P+S+ V ++GTGK+PD+ + ++V+E FD RPG I  +LDL+R     + + AAYGHFGR D D  WE
Sbjct:  208 TQEQIRKDVIDYVILDVVDRNLIDDRTRYFINPTGRFVVGGPQGDTGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSGAYAARWVAKNIVAAGLARKCEVQVAYAIGVAHPVSILVTTFGTGKLPDERLAQLVRETFDLRPGAIIRDLDLRR---PIYRQVAAYGHFGRPDLDLPWE 384          
BLAST of CV885269 vs. ExPASy Swiss-Prot
Match: METK_STAAW (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain MW2) GN=metK PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 6.019e-49
Identity = 96/181 (53.04%), Postives = 131/181 (72.38%), Query Frame = -1
Query:  282 VTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 824
            VT ++I  D+K HVI P +P+  ++++T F++NP+GRFVIGGP GDAGLTGRKII+DTY            GKDPTKVDRS AY  R  AK+IVA+GLA +C VQ++YAIGV EP+S+ +D++GTGK+ + ++++ V+++FD RP  I   LDLK+     + +TAAYGHFGR D  F WE
Sbjct:  207 VTLEQIQEDIKAHVIYPTVPENLINEQTKFYINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGCFSGKDPTKVDRSAAYAARYVAKNIVAAGLADQCEVQLAYAIGVAEPVSIAIDTFGTGKVSEGQLVEAVRKHFDLRPAGIIKMLDLKQ---PIYKQTAAYGHFGRTDVLFPWE 384          
The following BLAST results are available for this feature:
BLAST of CV885269 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_CHLAA1.584e-4957.46S-adenosylmethionine synthetase OS=Chloroflexus au... [more]
METK1_BOVIN1.584e-4954.30S-adenosylmethionine synthetase isoform type-1 OS=... [more]
METK_NEIMB2.069e-4953.04S-adenosylmethionine synthetase OS=Neisseria menin... [more]
METK_CLOTH2.069e-4956.91S-adenosylmethionine synthetase OS=Clostridium the... [more]
METK_BACHK2.069e-4955.25S-adenosylmethionine synthetase OS=Bacillus thurin... [more]
METK_BACC72.069e-4955.25S-adenosylmethionine synthetase OS=Bacillus cereus... [more]
METK_DESHD3.529e-4953.89S-adenosylmethionine synthetase OS=Desulfitobacter... [more]
METK1_RAT3.529e-4955.61S-adenosylmethionine synthetase isoform type-1 OS=... [more]
METK_SYMTH4.609e-4953.33S-adenosylmethionine synthetase OS=Symbiobacterium... [more]
METK_STAAW6.019e-4953.04S-adenosylmethionine synthetase OS=Staphylococcus ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_013F10_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_013_T3_F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885269 ID=CV885269; Name=CV885269; organism=Citrus sinensis; type=EST; length=824bp
AACTCAAAGATCTGCTCATTCTTGTTTTATTCATCAATAAAATTTCAGAA
CAATTCATATCCACCTCTCAATTCATTATGCCTTGCATTGAGAATCCATT
AAACATATTTATAAAAAAAAAAAAAAAAGGAAAAGAAAAAGAAAGAAAGA
AAGAAAACATTCATGTAACTGAAACAAAAGTAAAAAAAAAAGTAGACATA
TATAAGAACCAATGAGAGGCCAGCAGCTCATCCTTGATTAGTTTAAGCTG
GAAGTTTCTCCTACTTGAGTGGCTTAACAATCTCCCAAGTGAAATCAGGA
TCATCTCTGCCAAAGTGCCCATAAGCGGCAGTCTTCAAGAACCTGCCGTT
GCCACCCCTCTTGAGATCAAGATTAATAGAAATCATCCCAGGCCTAAAAT
CAAAATTCTCCTTCACAATCTTCAAAATTTCCTTGTCAGGGATCTTCCCA
GTCCCATAACTATCAACAAAAACTGACAAAGGCTCGGGCACACCAATAGC
GTAAGAAACCTGAACAATGCATCTCCTGGCAAGCCCACTTGCCACAATAC
TCTTAGCAGCTTGCCTTACAATGTAAGCACCGCTTCTATCAACCTTGGTA
GGATCTTTCCCTGAGAAAGCCCCACCGCCGTGTGCCCCCCAGCCACCATA
AGTATCAATAATAATCTTCCGGCCAGTGAGCCCAGCATCACCGTGAGGGC
CACCAATAACAAAACGGCCAGATGGGTTAAGATGGAAAATAGTTTTGTCA
TCCAAGTACTTGTCAGGAATCACAGGCTTGATCACATGTTGCTTGAGATC
TGCCGCAATCTCATCATTAGTTAC
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