CV885269

Overview
NameCV885269
Unique NameCV885269
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length824
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CV885269 vs. ExPASy Swiss-Prot
Match: METK_POPDE (S-adenosylmethionine synthetase OS=Populus deltoides GN=METK PE=2 SV=1)

HSP 1 Score: 335.495 bits (859), Expect = 2.185e-91
Identity = 165/187 (88.24%), Postives = 173/187 (92.51%), Query Frame = -1 
Query:  264 VTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEIVKPLK 824
            VTNDEIAADLK+HVIKPVIP+KYLD+KTIFHLNPSGRFVIGGPHG++GLTGRKIIIDTY            GKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVD+YGTGKIPDKEIL+IVKE FDFRPGMISINLDLKRGGN RFLKTAAYGHFGRDDPDFTWE+VKPLK
Sbjct:  202 VTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGESGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILQIVKERFDFRPGMISINLDLKRGGNSRFLKTAAYGHFGRDDPDFTWEVVKPLK 388
[Close]
BLAST of CV885269 vs. ExPASy Swiss-Prot
Match: METK_CARPA (S-adenosylmethionine synthetase OS=Carica papaya GN=SAMS PE=2 SV=1)

HSP 1 Score: 335.109 bits (858), Expect = 2.854e-91
Identity = 164/185 (88.65%), Postives = 172/185 (92.97%), Query Frame = -1 
Query:  270 VTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEIVKP 824
            VTNDEIAADLK+HVIKPVIP+KYLD+KTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY            GKDPTKVDRSGAYIVRQAAKSIVA+GLARRCIVQVSYAIGVPEPLSV+VD+YGTGKIPDKEILKIVKENFDFRPGMI+INLDLKRGGN RFLKTAAYGHFGRDDPDFTWE+VKP
Sbjct:  201 VTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVYVDTYGTGKIPDKEILKIVKENFDFRPGMITINLDLKRGGNSRFLKTAAYGHFGRDDPDFTWEVVKP 385
[Close]
BLAST of CV885269 vs. ExPASy Swiss-Prot
Match: METK_DENCR (S-adenosylmethionine synthetase OS=Dendrobium crumenatum GN=SAMS PE=2 SV=1)

HSP 1 Score: 333.183 bits (853), Expect = 1.084e-90
Identity = 164/190 (86.32%), Postives = 176/190 (92.63%), Query Frame = -1 
Query:  255 VTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEIVKPLK*EK 824
            VTNDEIAADLK+HVIKPV+P++YLD+KTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY            GKDPTKVDRSGAYIVRQAAKS+VA+GLARRCIVQVSYAIGVPEPLSVFVD+YGTGKIPDKEILKIVKENFDFRPGMI+INLDLKRGGN RF+KTAAYGHFGRDDPDFTWE+VKPLK +K
Sbjct:  204 VTNDEIAADLKEHVIKPVVPEQYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVANGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKENFDFRPGMITINLDLKRGGN-RFIKTAAYGHFGRDDPDFTWEVVKPLKWDK 392
[Close]
BLAST of CV885269 vs. ExPASy Swiss-Prot
Match: METK3_PICSI (S-adenosylmethionine synthetase 3 OS=Picea sitchensis GN=METK3 PE=2 SV=1)

HSP 1 Score: 332.798 bits (852), Expect = 1.416e-90
Identity = 166/194 (85.57%), Postives = 176/194 (90.72%), Query Frame = -1 
Query:  246 VTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEIVKPLK*EK-LPA 824
            VTND+IAADLKQHVIKPVIP+KYLD+ TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY            GKDPTKVDRSGAYIVRQAAKSIVA+GLARRC+VQVSYAIGVPEPLSVFVDSYGTG IPDK IL+++K+NFDFRPGMI+INLDLKRGGNGRF KTAAYGHFGRDDPDFTWEIVKPLK EK LPA
Sbjct:  201 VTNDQIAADLKQHVIKPVIPEKYLDENTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVAAGLARRCLVQVSYAIGVPEPLSVFVDSYGTGTIPDKVILELIKKNFDFRPGMITINLDLKRGGNGRFQKTAAYGHFGRDDPDFTWEIVKPLKQEKALPA 394
[Close]
BLAST of CV885269 vs. ExPASy Swiss-Prot
Match: METK2_PICSI (S-adenosylmethionine synthetase 2 OS=Picea sitchensis GN=METK2 PE=2 SV=1)

HSP 1 Score: 332.798 bits (852), Expect = 1.416e-90
Identity = 163/193 (84.46%), Postives = 174/193 (90.16%), Query Frame = -1 
Query:  246 VTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEIVKPLK*EKLPA 824
            VTND+IAADLK+HVIKPVIP+KYLD+ TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY            GKDPTKVDRSGAYIVRQAAKSIVA+GLARRC+VQVSYAIGVPEPLSVFVDSYGTG IPDKEIL+++KENFDFRPGMI+INLDLKRGGNGRF KTAAYGHFGRDDPDFTWE VKPLK +K  A
Sbjct:  201 VTNDQIAADLKEHVIKPVIPEKYLDENTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVAAGLARRCLVQVSYAIGVPEPLSVFVDSYGTGSIPDKEILELIKENFDFRPGMITINLDLKRGGNGRFQKTAAYGHFGRDDPDFTWETVKPLKWDKAQA 393
[Close]
BLAST of CV885269 vs. ExPASy Swiss-Prot
Match: METK1_TRIMO (S-adenosylmethionine synthetase 1 OS=Triticum monococcum GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 331.643 bits (849), Expect = 3.155e-90
Identity = 165/193 (85.49%), Postives = 175/193 (90.67%), Query Frame = -1 
Query:  246 VTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEIVKPLK*EKLPA 824
            VTNDEIAADLK+HVIKPVIP+KYLD+KTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY            GKDPTKVDRSGAYI RQAAKSI+ASGLARRCIVQ+SYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLK+GGN RF+KTAAYGHFGR+D DFTWE+VKPLK +K  A
Sbjct:  203 VTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIARQAAKSIIASGLARRCIVQISYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKKGGN-RFIKTAAYGHFGREDADFTWEVVKPLKFDKASA 394
[Close]
BLAST of CV885269 vs. ExPASy Swiss-Prot
Match: METK_BRARP (S-adenosylmethionine synthetase OS=Brassica rapa subsp. pekinensis GN=SAMS PE=2 SV=1)

HSP 1 Score: 331.257 bits (848), Expect = 4.120e-90
Identity = 161/190 (84.74%), Postives = 174/190 (91.58%), Query Frame = -1 
Query:  255 VTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEIVKPLK*EK 824
            VTNDEIA DLK+HVIKP+IP+KYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY            GKDPTKVDRSGAYIVRQAAKS+VA+G+ARR +VQVSYAIGVPEPLSVFVD+YGTG IPDKEILKIVKE+FDFRPGM++INLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE+VKPLK +K
Sbjct:  201 VTNDEIARDLKEHVIKPIIPEKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVANGMARRALVQVSYAIGVPEPLSVFVDTYGTGLIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWDK 390
[Close]
BLAST of CV885269 vs. ExPASy Swiss-Prot
Match: METK5_BRAJU (S-adenosylmethionine synthetase 5 OS=Brassica juncea GN=MSAMS5 PE=2 SV=1)

HSP 1 Score: 331.257 bits (848), Expect = 4.120e-90
Identity = 161/190 (84.74%), Postives = 174/190 (91.58%), Query Frame = -1 
Query:  255 VTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEIVKPLK*EK 824
            VTNDEIA DLK+HVIKP+IP+KYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY            GKDPTKVDRSGAYIVRQAAKS+VA+G+ARR +VQVSYAIGVPEPLSVFVD+YGTG IPDKEILKIVKE+FDFRPGM++INLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE+VKPLK +K
Sbjct:  201 VTNDEIARDLKEHVIKPIIPEKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVANGMARRALVQVSYAIGVPEPLSVFVDTYGTGLIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWDK 390
[Close]
BLAST of CV885269 vs. ExPASy Swiss-Prot
Match: METK3_BRAJU (S-adenosylmethionine synthetase 3 OS=Brassica juncea GN=MSAMS3 PE=2 SV=1)

HSP 1 Score: 331.257 bits (848), Expect = 4.120e-90
Identity = 161/190 (84.74%), Postives = 174/190 (91.58%), Query Frame = -1 
Query:  255 VTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEIVKPLK*EK 824
            VTNDEIA DLK+HVIKP+IP+KYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY            GKDPTKVDRSGAYIVRQAAKS+VA+G+ARR +VQVSYAIGVPEPLSVFVD+YGTG IPDKEILKIVKE+FDFRPGM++INLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE+VKPLK +K
Sbjct:  201 VTNDEIARDLKEHVIKPIIPEKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVANGMARRALVQVSYAIGVPEPLSVFVDTYGTGLIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWDK 390
[Close]
BLAST of CV885269 vs. ExPASy Swiss-Prot
Match: METK2_DAUCA (S-adenosylmethionine synthetase 2 OS=Daucus carota GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 330.487 bits (846), Expect = 7.028e-90
Identity = 164/190 (86.32%), Postives = 171/190 (90.00%), Query Frame = -1 
Query:  255 VTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEIVKPLK*EK 824
            VTNDEIAADLK+HVIKP+IP KYLD+KTIFHLNPSGRFVIGGPHGDAGLTGR IIIDTY            GKDPTKVDRSGAYIVRQAAKSIVA+GLARRCIVQVSYAIGVP+PLSVFVDSYGTG IPDKEILKIVKE FDFRPGMI+INLDLKRGGN RFLKTAAYGHFGRDD DFTWE+VKPLK EK
Sbjct:  201 VTNDEIAADLKEHVIKPIIPAKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRMIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPDPLSVFVDSYGTGNIPDKEILKIVKETFDFRPGMIAINLDLKRGGNNRFLKTAAYGHFGRDDADFTWEVVKPLKWEK 390
The following BLAST results are available for this feature:
BLAST of CV885269 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_POPDE2.185e-9188.24S-adenosylmethionine synthetase OS=Populus deltoid... [more]
METK_CARPA2.854e-9188.65S-adenosylmethionine synthetase OS=Carica papaya G... [more]
METK_DENCR1.084e-9086.32S-adenosylmethionine synthetase OS=Dendrobium crum... [more]
METK3_PICSI1.416e-9085.57S-adenosylmethionine synthetase 3 OS=Picea sitchen... [more]
METK2_PICSI1.416e-9084.46S-adenosylmethionine synthetase 2 OS=Picea sitchen... [more]
METK1_TRIMO3.155e-9085.49S-adenosylmethionine synthetase 1 OS=Triticum mono... [more]
METK_BRARP4.120e-9084.74S-adenosylmethionine synthetase OS=Brassica rapa s... [more]
METK5_BRAJU4.120e-9084.74S-adenosylmethionine synthetase 5 OS=Brassica junc... [more]
METK3_BRAJU4.120e-9084.74S-adenosylmethionine synthetase 3 OS=Brassica junc... [more]
METK2_DAUCA7.028e-9086.32S-adenosylmethionine synthetase 2 OS=Daucus carota... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_013F10_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_013_T3_F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885269 ID=CV885269; Name=CV885269; organism=Citrus sinensis; type=EST; length=824bp
AACTCAAAGATCTGCTCATTCTTGTTTTATTCATCAATAAAATTTCAGAA
CAATTCATATCCACCTCTCAATTCATTATGCCTTGCATTGAGAATCCATT
AAACATATTTATAAAAAAAAAAAAAAAAGGAAAAGAAAAAGAAAGAAAGA
AAGAAAACATTCATGTAACTGAAACAAAAGTAAAAAAAAAAGTAGACATA
TATAAGAACCAATGAGAGGCCAGCAGCTCATCCTTGATTAGTTTAAGCTG
GAAGTTTCTCCTACTTGAGTGGCTTAACAATCTCCCAAGTGAAATCAGGA
TCATCTCTGCCAAAGTGCCCATAAGCGGCAGTCTTCAAGAACCTGCCGTT
GCCACCCCTCTTGAGATCAAGATTAATAGAAATCATCCCAGGCCTAAAAT
CAAAATTCTCCTTCACAATCTTCAAAATTTCCTTGTCAGGGATCTTCCCA
GTCCCATAACTATCAACAAAAACTGACAAAGGCTCGGGCACACCAATAGC
GTAAGAAACCTGAACAATGCATCTCCTGGCAAGCCCACTTGCCACAATAC
TCTTAGCAGCTTGCCTTACAATGTAAGCACCGCTTCTATCAACCTTGGTA
GGATCTTTCCCTGAGAAAGCCCCACCGCCGTGTGCCCCCCAGCCACCATA
AGTATCAATAATAATCTTCCGGCCAGTGAGCCCAGCATCACCGTGAGGGC
CACCAATAACAAAACGGCCAGATGGGTTAAGATGGAAAATAGTTTTGTCA
TCCAAGTACTTGTCAGGAATCACAGGCTTGATCACATGTTGCTTGAGATC
TGCCGCAATCTCATCATTAGTTAC
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