CV885269

Overview
NameCV885269
Unique NameCV885269
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length824
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885269 vs. ExPASy Swiss-Prot
Match: METK3_ORYSJ (S-adenosylmethionine synthetase 3 OS=Oryza sativa subsp. japonica GN=METK3 PE=2 SV=1)

HSP 1 Score: 328.946 bits (842), Expect = 2.045e-89
Identity = 161/190 (84.74%), Postives = 173/190 (91.05%), Query Frame = -1
Query:  255 VTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEIVKPLK*EK 824
            VTNDEIAADLK+HVIKPVIP++YLD+KTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY            GKDPTKVDRSGAYI RQAAKSIVA+GLARRCIVQVSYAIGVPEPLSVFVD+YGTGKIPD+EIL+IV ENFDFRPGMI INLDL RGGNGR+LKTAAYGHFGR+DPDFTWE+VKPLK E+
Sbjct:  204 VTNDEIAADLKEHVIKPVIPEQYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIARQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDREILRIVTENFDFRPGMIIINLDLMRGGNGRYLKTAAYGHFGREDPDFTWEVVKPLKWEE 393          
BLAST of CV885269 vs. ExPASy Swiss-Prot
Match: METK_CAMSI (S-adenosylmethionine synthetase OS=Camellia sinensis GN=SAM PE=2 SV=1)

HSP 1 Score: 328.561 bits (841), Expect = 2.671e-89
Identity = 162/181 (89.50%), Postives = 168/181 (92.82%), Query Frame = -1
Query:  282 VTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 824
            VTNDEIAADLK+HVIKPVIPDKYLD+KTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY            GKDPTKVDRSGAYIVRQAAKSIVA+GLARRCIVQVSYAIGVPEPLSVFVD+YGTGKIPDKEILKIVKE+FDFRPGMI+INLDLKRGGN RFLKTAAYGHFGRDDPDFTWE
Sbjct:  201 VTNDEIAADLKEHVIKPVIPDKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKESFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGRDDPDFTWE 381          
BLAST of CV885269 vs. ExPASy Swiss-Prot
Match: METK2_ARATH (S-adenosylmethionine synthetase 2 OS=Arabidopsis thaliana GN=SAM2 PE=1 SV=1)

HSP 1 Score: 328.561 bits (841), Expect = 2.671e-89
Identity = 160/190 (84.21%), Postives = 172/190 (90.53%), Query Frame = -1
Query:  255 VTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEIVKPLK*EK 824
            VTNDEIA DLK+HVIKP+IP+KYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY            GKDPTKVDRSGAYIVRQAAKS+VA+G+ARR +VQVSYAIGVPEPLSVFVD+YGTG IPDKEILKIVKE FDFRPGM++INLDLKRGGNGRF KTAAYGHFGRDDPDFTWE+VKPLK +K
Sbjct:  201 VTNDEIARDLKEHVIKPIIPEKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVANGMARRALVQVSYAIGVPEPLSVFVDTYGTGLIPDKEILKIVKETFDFRPGMMTINLDLKRGGNGRFQKTAAYGHFGRDDPDFTWEVVKPLKWDK 390          
BLAST of CV885269 vs. ExPASy Swiss-Prot
Match: METK4_HORVU (S-adenosylmethionine synthetase 4 OS=Hordeum vulgare GN=SAM4 PE=2 SV=1)

HSP 1 Score: 328.176 bits (840), Expect = 3.488e-89
Identity = 162/190 (85.26%), Postives = 172/190 (90.53%), Query Frame = -1
Query:  255 VTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEIVKPLK*EK 824
            VTNDEIAADLK+HVIKPVIP++YLD+ TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY            GKDPTKVDRSGAYI RQAAKSIVASG+ARRCIVQVSYAIGVPEPLSVFVD+YGTGKIPDKEIL+IVKENFDFRPGMI INLDLKRGG+GR+LKTAAYGHFGRD  DFTWE+VKPLK EK
Sbjct:  204 VTNDEIAADLKEHVIKPVIPEQYLDENTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIARQAAKSIVASGIARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILEIVKENFDFRPGMIIINLDLKRGGSGRYLKTAAYGHFGRDGADFTWEVVKPLKWEK 393          
BLAST of CV885269 vs. ExPASy Swiss-Prot
Match: METK3_HORVU (S-adenosylmethionine synthetase 3 OS=Hordeum vulgare GN=SAM3 PE=2 SV=1)

HSP 1 Score: 327.791 bits (839), Expect = 4.556e-89
Identity = 163/193 (84.46%), Postives = 173/193 (89.64%), Query Frame = -1
Query:  246 VTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEIVKPLK*EKLPA 824
            VTNDEIAADLK+HVIKPVIP KYLD+ TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY            GKDPTKVDRSGAYI RQAAKSI+ASGLARRCIVQ+SYAIGVPEPLSVFVDSYGTGKIPD+EILK+VKENFDFRPGMISINLDLK+GGN RF+KTAAYGHFGRDD DFTWE+VKPLK +K  A
Sbjct:  203 VTNDEIAADLKEHVIKPVIPAKYLDENTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIARQAAKSIIASGLARRCIVQISYAIGVPEPLSVFVDSYGTGKIPDREILKLVKENFDFRPGMISINLDLKKGGN-RFIKTAAYGHFGRDDADFTWEVVKPLKFDKASA 394          
BLAST of CV885269 vs. ExPASy Swiss-Prot
Match: METK1_ARATH (S-adenosylmethionine synthetase 1 OS=Arabidopsis thaliana GN=SAM1 PE=1 SV=2)

HSP 1 Score: 327.02 bits (837), Expect = 7.771e-89
Identity = 160/190 (84.21%), Postives = 173/190 (91.05%), Query Frame = -1
Query:  255 VTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEIVKPLK*EK 824
            VTNDEIA DLK+HVIKPVIP+KYLD+KTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY            GKDPTKVDRSGAYIVRQAAKS+VA+G+ARR +VQVSYAIGVPEPLSVFVD+Y TG IPDKEILKIVKE+FDFRPGM++INLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE+VKPLK +K
Sbjct:  201 VTNDEIARDLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVANGMARRALVQVSYAIGVPEPLSVFVDTYETGLIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWDK 390          
BLAST of CV885269 vs. ExPASy Swiss-Prot
Match: METK_PINBN (S-adenosylmethionine synthetase OS=Pinus banksiana GN=METK PE=2 SV=1)

HSP 1 Score: 326.25 bits (835), Expect = 1.326e-88
Identity = 162/193 (83.94%), Postives = 171/193 (88.60%), Query Frame = -1
Query:  246 VTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEIVKPLK*EKLPA 824
            V NDEIA DLK+HVIKPVIP+KYLD+ TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY            GKDPTKVDRSGAYIVRQAAKSIVA+GLARRCIVQVSYAIGVPEPLS+FVD+YGTG IPDKEIL+I+KE+FDFRPGMISINLDLKRGGNGR  KTAAYGHFGRDDPDFTWE VKPLK EK  A
Sbjct:  201 VPNDEIAPDLKEHVIKPVIPEKYLDENTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSLFVDTYGTGSIPDKEILEIIKEHFDFRPGMISINLDLKRGGNGRSQKTAAYGHFGRDDPDFTWETVKPLKWEKAQA 393          
BLAST of CV885269 vs. ExPASy Swiss-Prot
Match: METK_WHEAT (S-adenosylmethionine synthetase OS=Triticum aestivum GN=SAMS PE=2 SV=1)

HSP 1 Score: 325.865 bits (834), Expect = 1.731e-88
Identity = 160/190 (84.21%), Postives = 171/190 (90.00%), Query Frame = -1
Query:  255 VTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEIVKPLK*EK 824
            VTNDEIAADLK+HVIKPVIP++YLD+ TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY            GKDPTKVDRSGAY+ RQAAKSIVASG+ARRCIVQVSYAIGVPEPLSVFVD+YGTGKIPDKEIL+IVKENFDFRPGMI INLDLKRGG GR+LKTAAYGHFGR+  DFTWE+VKPLK EK
Sbjct:  204 VTNDEIAADLKEHVIKPVIPEQYLDENTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYVARQAAKSIVASGIARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILEIVKENFDFRPGMIIINLDLKRGGKGRYLKTAAYGHFGREGADFTWEVVKPLKWEK 393          
BLAST of CV885269 vs. ExPASy Swiss-Prot
Match: METK2_HORVU (S-adenosylmethionine synthetase 2 OS=Hordeum vulgare GN=SAM2 PE=2 SV=1)

HSP 1 Score: 325.865 bits (834), Expect = 1.731e-88
Identity = 162/193 (83.94%), Postives = 172/193 (89.12%), Query Frame = -1
Query:  246 VTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEIVKPLK*EKLPA 824
            VTNDEIAADLK+HVIKPVIP KYLD+ TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY            GKDPTKVDRSGAYI RQAAKSI+ASGLARRCIVQ+SYAIGVPEPLSVFVDSYGTGKIPD+EILK+VKENFDFRPGMISINLDLK+GG  RF+KTAAYGHFGRDD DFTWE+VKPLK +K  A
Sbjct:  203 VTNDEIAADLKEHVIKPVIPGKYLDENTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIARQAAKSIIASGLARRCIVQISYAIGVPEPLSVFVDSYGTGKIPDREILKLVKENFDFRPGMISINLDLKKGGK-RFIKTAAYGHFGRDDADFTWEVVKPLKFDKASA 394          
BLAST of CV885269 vs. ExPASy Swiss-Prot
Match: METK1_BETVU (S-adenosylmethionine synthetase 1 OS=Beta vulgaris GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 325.094 bits (832), Expect = 2.953e-88
Identity = 161/190 (84.74%), Postives = 173/190 (91.05%), Query Frame = -1
Query:  255 VTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEIVKPLK*EK 824
            VTNDEIAADLK+HVIKPVIP+KYLD+KTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY            GKDPTKVDRSGAYI RQAAKSIVASGLARRCIVQ+SYAIGVPEPLSVFVD+YGTGKIPDK+ILKIVKE FDFRPGMI+INLDL +GG+ R+LKTAAYGHFGRDDPDFTWE+VKPLK +K
Sbjct:  205 VTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIARQAAKSIVASGLARRCIVQISYAIGVPEPLSVFVDTYGTGKIPDKDILKIVKETFDFRPGMIAINLDLLKGGS-RYLKTAAYGHFGRDDPDFTWEVVKPLKWDK 393          
The following BLAST results are available for this feature:
BLAST of CV885269 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK3_ORYSJ2.045e-8984.74S-adenosylmethionine synthetase 3 OS=Oryza sativa ... [more]
METK_CAMSI2.671e-8989.50S-adenosylmethionine synthetase OS=Camellia sinens... [more]
METK2_ARATH2.671e-8984.21S-adenosylmethionine synthetase 2 OS=Arabidopsis t... [more]
METK4_HORVU3.488e-8985.26S-adenosylmethionine synthetase 4 OS=Hordeum vulga... [more]
METK3_HORVU4.556e-8984.46S-adenosylmethionine synthetase 3 OS=Hordeum vulga... [more]
METK1_ARATH7.771e-8984.21S-adenosylmethionine synthetase 1 OS=Arabidopsis t... [more]
METK_PINBN1.326e-8883.94S-adenosylmethionine synthetase OS=Pinus banksiana... [more]
METK_WHEAT1.731e-8884.21S-adenosylmethionine synthetase OS=Triticum aestiv... [more]
METK2_HORVU1.731e-8883.94S-adenosylmethionine synthetase 2 OS=Hordeum vulga... [more]
METK1_BETVU2.953e-8884.74S-adenosylmethionine synthetase 1 OS=Beta vulgaris... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_2_013F10_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_013_T3_F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885269 ID=CV885269; Name=CV885269; organism=Citrus sinensis; type=EST; length=824bp
AACTCAAAGATCTGCTCATTCTTGTTTTATTCATCAATAAAATTTCAGAA
CAATTCATATCCACCTCTCAATTCATTATGCCTTGCATTGAGAATCCATT
AAACATATTTATAAAAAAAAAAAAAAAAGGAAAAGAAAAAGAAAGAAAGA
AAGAAAACATTCATGTAACTGAAACAAAAGTAAAAAAAAAAGTAGACATA
TATAAGAACCAATGAGAGGCCAGCAGCTCATCCTTGATTAGTTTAAGCTG
GAAGTTTCTCCTACTTGAGTGGCTTAACAATCTCCCAAGTGAAATCAGGA
TCATCTCTGCCAAAGTGCCCATAAGCGGCAGTCTTCAAGAACCTGCCGTT
GCCACCCCTCTTGAGATCAAGATTAATAGAAATCATCCCAGGCCTAAAAT
CAAAATTCTCCTTCACAATCTTCAAAATTTCCTTGTCAGGGATCTTCCCA
GTCCCATAACTATCAACAAAAACTGACAAAGGCTCGGGCACACCAATAGC
GTAAGAAACCTGAACAATGCATCTCCTGGCAAGCCCACTTGCCACAATAC
TCTTAGCAGCTTGCCTTACAATGTAAGCACCGCTTCTATCAACCTTGGTA
GGATCTTTCCCTGAGAAAGCCCCACCGCCGTGTGCCCCCCAGCCACCATA
AGTATCAATAATAATCTTCCGGCCAGTGAGCCCAGCATCACCGTGAGGGC
CACCAATAACAAAACGGCCAGATGGGTTAAGATGGAAAATAGTTTTGTCA
TCCAAGTACTTGTCAGGAATCACAGGCTTGATCACATGTTGCTTGAGATC
TGCCGCAATCTCATCATTAGTTAC
back to top