CV885269

Overview
NameCV885269
Unique NameCV885269
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length824
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CV885269 vs. ExPASy Swiss-Prot
Match: METK1_HORVU (S-adenosylmethionine synthetase 1 OS=Hordeum vulgare GN=SAM1 PE=2 SV=1)

HSP 1 Score: 324.709 bits (831), Expect = 3.857e-88
Identity = 161/193 (83.42%), Postives = 172/193 (89.12%), Query Frame = -1 
Query:  246 VTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEIVKPLK*EKLPA 824
            VTNDEIAADLK+HVIKPVIP KYLD+ TIFHLNPSGRFVIGGPHGDAGLT RKIIIDTY            GKDPTKVDRSGAYI RQAAKSI+ASGLARRCIVQ+SYAIGVPEPLSVFVDSYGTGKIPD+EILK+VKENFDFRPGMI+INLDLK+GGN RF+KTAAYGHFGRDD DFTWE+VKPLK +K  A
Sbjct:  203 VTNDEIAADLKEHVIKPVIPGKYLDENTIFHLNPSGRFVIGGPHGDAGLTARKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIARQAAKSIIASGLARRCIVQISYAIGVPEPLSVFVDSYGTGKIPDREILKLVKENFDFRPGMITINLDLKKGGN-RFIKTAAYGHFGRDDADFTWEVVKPLKFDKASA 394
[Close]
BLAST of CV885269 vs. ExPASy Swiss-Prot
Match: METK1_BRAJU (S-adenosylmethionine synthetase 1 OS=Brassica juncea GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 323.553 bits (828), Expect = 8.592e-88
Identity = 157/190 (82.63%), Postives = 172/190 (90.53%), Query Frame = -1 
Query:  255 VTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEIVKPLK*EK 824
            VTN+EIA DLK+HVIKP+IP+KYLDDKTIFHLNPSGRFVIGGP GDAGLTGRKIIIDTY            GKDPTKVDRSGAYIVRQ+AKS+VA+G+ARR +VQVSYAIGVPEP SVFVD+YGTG IPDKEILKIVKE+FDFRPGM++INLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE+VKPLK +K
Sbjct:  201 VTNEEIARDLKEHVIKPIIPEKYLDDKTIFHLNPSGRFVIGGPDGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQSAKSVVANGMARRALVQVSYAIGVPEPFSVFVDTYGTGLIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWDK 390
[Close]
BLAST of CV885269 vs. ExPASy Swiss-Prot
Match: METK2_PINCO (S-adenosylmethionine synthetase 2 OS=Pinus contorta GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 323.168 bits (827), Expect = 1.122e-87
Identity = 160/193 (82.90%), Postives = 171/193 (88.60%), Query Frame = -1 
Query:  246 VTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEIVKPLK*EKLPA 824
            VTND+IAADLK+HVIKPVIP+KYLD+ TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY            GKDPTKVDRSGAYIVRQAAKSIVA+GLARRC+VQVSYAIGV   LS+FVDSYGTG IPDKEIL+I+KE+FDFRPGMI+INLDLKRGGNGRF KTAAYGHFGRDDPDFTWE VKPLK EK  A
Sbjct:  201 VTNDQIAADLKEHVIKPVIPEKYLDENTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVAAGLARRCLVQVSYAIGVRGALSIFVDSYGTGSIPDKEILEIIKEHFDFRPGMITINLDLKRGGNGRFQKTAAYGHFGRDDPDFTWETVKPLKWEKAQA 393
[Close]
BLAST of CV885269 vs. ExPASy Swiss-Prot
Match: METK1_PEA (S-adenosylmethionine synthetase 1 (Fragment) OS=Pisum sativum GN=SAMS1 PE=2 SV=2)

HSP 1 Score: 322.783 bits (826), Expect = 1.466e-87
Identity = 162/190 (85.26%), Postives = 169/190 (88.95%), Query Frame = -1 
Query:  255 VTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEIVKPLK*EK 824
            VTNDEIAADLK+HVIKPVIP+KYLD KTI HLNPSGRFVIGGPHGDAGLTGRKIIIDTY            GKDPTKVDR GAYIVRQAAKSIVASGLARR IVQ+  AIGVPEPLSVFVD+YGTGKIPD+EILKIVKE FDFRPGMISINLDL RGGNGRFLKTAAYGHFGR+DPDFTWE+VKPLK EK
Sbjct:  176 VTNDEIAADLKEHVIKPVIPEKYLDSKTICHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRRGAYIVRQAAKSIVASGLARRAIVQLLRAIGVPEPLSVFVDTYGTGKIPDREILKIVKETFDFRPGMISINLDLLRGGNGRFLKTAAYGHFGREDPDFTWEVVKPLKWEK 365
[Close]
BLAST of CV885269 vs. ExPASy Swiss-Prot
Match: METK_MUSAC (S-adenosylmethionine synthetase OS=Musa acuminata GN=METK PE=2 SV=1)

HSP 1 Score: 322.398 bits (825), Expect = 1.914e-87
Identity = 161/190 (84.74%), Postives = 172/190 (90.53%), Query Frame = -1 
Query:  255 VTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEIVKPLK*EK 824
            VTNDEIAADLK+HVIKPVIP++YLD+KTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY            GKDPTKVDRSGAY+ RQAAKSIVAS LARRCIVQVSYAIGVPEPLSVFVD+YGTGKIPDKEILKIVKENFDFRPG+I+INL LKRGG  R+LKTAAYGHFGRDDPDFTWE+VKPL+ EK
Sbjct:  202 VTNDEIAADLKEHVIKPVIPEQYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYVARQAAKSIVASELARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKENFDFRPGLITINLGLKRGGY-RYLKTAAYGHFGRDDPDFTWEVVKPLELEK 390
[Close]
BLAST of CV885269 vs. ExPASy Swiss-Prot
Match: METK3_ATRNU (S-adenosylmethionine synthetase 3 OS=Atriplex nummularia GN=SAMS3 PE=1 SV=1)

HSP 1 Score: 322.013 bits (824), Expect = 2.500e-87
Identity = 161/190 (84.74%), Postives = 172/190 (90.53%), Query Frame = -1 
Query:  255 VTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEIVKPLK*EK 824
            VTNDEIAADLK+HVIKPVIP+KYLD+KTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY            GKDPTKVDRSGAYI RQAAKSIVA+GLARRCIVQ+SYAIGVPEPLSVFVD+YGTGKIPDKEILKIVKE+FDFRPGMI+INLDL +GG+ R+LKTAAYGHFGRDD DFTWE VKPLK EK
Sbjct:  205 VTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIARQAAKSIVAAGLARRCIVQISYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKESFDFRPGMIAINLDLLKGGS-RYLKTAAYGHFGRDDADFTWETVKPLKWEK 393
[Close]
BLAST of CV885269 vs. ExPASy Swiss-Prot
Match: METK4_ATRNU (S-adenosylmethionine synthetase 4 OS=Atriplex nummularia GN=SAMS4 PE=1 SV=1)

HSP 1 Score: 321.627 bits (823), Expect = 3.265e-87
Identity = 161/190 (84.74%), Postives = 171/190 (90.00%), Query Frame = -1 
Query:  255 VTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEIVKPLK*EK 824
            VTNDEIAADLK+HVIKPVIP+KYLD+KTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY            GKDPTKVDRSGAYI RQAAKSIVA+GLARRCIVQ+SYAIGVPEPLSVFVD+YGTGKIPDKEILKIVKE FDFRPGMI+INLDL +GG+ R+LKTAAYGHFGRDD DFTWE VKPLK EK
Sbjct:  205 VTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIARQAAKSIVAAGLARRCIVQISYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKETFDFRPGMIAINLDLLKGGS-RYLKTAAYGHFGRDDADFTWETVKPLKWEK 393
[Close]
BLAST of CV885269 vs. ExPASy Swiss-Prot
Match: METK2_ATRNU (S-adenosylmethionine synthetase 2 OS=Atriplex nummularia GN=SAMS2 PE=1 SV=1)

HSP 1 Score: 321.627 bits (823), Expect = 3.265e-87
Identity = 161/190 (84.74%), Postives = 171/190 (90.00%), Query Frame = -1 
Query:  255 VTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEIVKPLK*EK 824
            VTNDEIAADLK+HVIKPVIP+KYLD+KTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY            GKDPTKVDRSGAYI RQAAKSIVA+GLARRCIVQ+SYAIGVPEPLSVFVD+YGTGKIPDKEILKIVKE FDFRPGMI+INLDL +GG+ R+LKTAAYGHFGRDD DFTWE VKPLK EK
Sbjct:  205 VTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIARQAAKSIVAAGLARRCIVQISYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKETFDFRPGMIAINLDLLKGGS-RYLKTAAYGHFGRDDADFTWETVKPLKWEK 393
[Close]
BLAST of CV885269 vs. ExPASy Swiss-Prot
Match: METK1_ATRNU (S-adenosylmethionine synthetase 1 OS=Atriplex nummularia GN=SAMS1 PE=1 SV=2)

HSP 1 Score: 321.627 bits (823), Expect = 3.265e-87
Identity = 161/190 (84.74%), Postives = 171/190 (90.00%), Query Frame = -1 
Query:  255 VTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEIVKPLK*EK 824
            VTNDEIAADLK+HVIKPVIP+KYLD+KTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY            GKDPTKVDRSGAYI RQAAKSIVA+GLARRCIVQ+SYAIGVPEPLSVFVD+YGTGKIPDKEILKIVKE FDFRPGMI+INLDL +GG+ R+LKTAAYGHFGRDD DFTWE VKPLK EK
Sbjct:  205 VTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIARQAAKSIVAAGLARRCIVQISYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKETFDFRPGMIAINLDLLKGGS-RYLKTAAYGHFGRDDADFTWETVKPLKWEK 393
[Close]
BLAST of CV885269 vs. ExPASy Swiss-Prot
Match: METK1_DAUCA (S-adenosylmethionine synthetase 1 OS=Daucus carota GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 319.701 bits (818), Expect = 1.241e-86
Identity = 170/238 (71.43%), Postives = 175/238 (73.53%), Query Frame = -1 
Query:  255 VTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSY------------------------------------------------GTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEIVKPLK*EK 824
            VTNDEIAADLK+HVIKP+IP KYLD+KTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY            GKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSY                                                GTGKIPD+EILKIVKE FDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE+VKPLK EK
Sbjct:  201 VTNDEIAADLKEHVIKPIIPAKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDREILQIVKETFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGTGKIPDREILKIVKETFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEK 438
The following BLAST results are available for this feature:
BLAST of CV885269 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK1_HORVU3.857e-8883.42S-adenosylmethionine synthetase 1 OS=Hordeum vulga... [more]
METK1_BRAJU8.592e-8882.63S-adenosylmethionine synthetase 1 OS=Brassica junc... [more]
METK2_PINCO1.122e-8782.90S-adenosylmethionine synthetase 2 OS=Pinus contort... [more]
METK1_PEA1.466e-8785.26S-adenosylmethionine synthetase 1 (Fragment) OS=Pi... [more]
METK_MUSAC1.914e-8784.74S-adenosylmethionine synthetase OS=Musa acuminata ... [more]
METK3_ATRNU2.500e-8784.74S-adenosylmethionine synthetase 3 OS=Atriplex numm... [more]
METK4_ATRNU3.265e-8784.74S-adenosylmethionine synthetase 4 OS=Atriplex numm... [more]
METK2_ATRNU3.265e-8784.74S-adenosylmethionine synthetase 2 OS=Atriplex numm... [more]
METK1_ATRNU3.265e-8784.74S-adenosylmethionine synthetase 1 OS=Atriplex numm... [more]
METK1_DAUCA1.241e-8671.43S-adenosylmethionine synthetase 1 OS=Daucus carota... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_013F10_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_013_T3_F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885269 ID=CV885269; Name=CV885269; organism=Citrus sinensis; type=EST; length=824bp
AACTCAAAGATCTGCTCATTCTTGTTTTATTCATCAATAAAATTTCAGAA
CAATTCATATCCACCTCTCAATTCATTATGCCTTGCATTGAGAATCCATT
AAACATATTTATAAAAAAAAAAAAAAAAGGAAAAGAAAAAGAAAGAAAGA
AAGAAAACATTCATGTAACTGAAACAAAAGTAAAAAAAAAAGTAGACATA
TATAAGAACCAATGAGAGGCCAGCAGCTCATCCTTGATTAGTTTAAGCTG
GAAGTTTCTCCTACTTGAGTGGCTTAACAATCTCCCAAGTGAAATCAGGA
TCATCTCTGCCAAAGTGCCCATAAGCGGCAGTCTTCAAGAACCTGCCGTT
GCCACCCCTCTTGAGATCAAGATTAATAGAAATCATCCCAGGCCTAAAAT
CAAAATTCTCCTTCACAATCTTCAAAATTTCCTTGTCAGGGATCTTCCCA
GTCCCATAACTATCAACAAAAACTGACAAAGGCTCGGGCACACCAATAGC
GTAAGAAACCTGAACAATGCATCTCCTGGCAAGCCCACTTGCCACAATAC
TCTTAGCAGCTTGCCTTACAATGTAAGCACCGCTTCTATCAACCTTGGTA
GGATCTTTCCCTGAGAAAGCCCCACCGCCGTGTGCCCCCCAGCCACCATA
AGTATCAATAATAATCTTCCGGCCAGTGAGCCCAGCATCACCGTGAGGGC
CACCAATAACAAAACGGCCAGATGGGTTAAGATGGAAAATAGTTTTGTCA
TCCAAGTACTTGTCAGGAATCACAGGCTTGATCACATGTTGCTTGAGATC
TGCCGCAATCTCATCATTAGTTAC
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