CV885269

Overview
NameCV885269
Unique NameCV885269
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length824
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885269 vs. ExPASy Swiss-Prot
Match: METK_OSTTA (S-adenosylmethionine synthetase OS=Ostreococcus tauri GN=METK PE=3 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 1.167e-68
Identity = 133/187 (71.12%), Postives = 148/187 (79.14%), Query Frame = -1
Query:  267 VTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD-FTWEIVKPL 824
            V+N++IA DL   VIK V+P+KYLD  TIFHLNPSGRFVIGGP GDAGLTGRKIIIDTY            GKDPTKVDRSGAYI RQ AKSIVA+GLARR + Q+SYAIGV +PLS+ VD+YG+GKIPD EIL+ VKE FDFR GMI  +LDLKRGGN R+  TAAYGHFGRDD D FTWE V PL
Sbjct:  200 VSNEKIAEDLMNEVIKKVVPEKYLDADTIFHLNPSGRFVIGGPDGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIARQVAKSIVAAGLARRALFQISYAIGVAQPLSIHVDTYGSGKIPDSEILEKVKEKFDFRAGMIGKSLDLKRGGNKRYQTTAAYGHFGRDDTDVFTWEKVVPL 386          
BLAST of CV885269 vs. ExPASy Swiss-Prot
Match: METK2_PETCR (S-adenosylmethionine synthetase 2 (Fragment) OS=Petroselinum crispum GN=SMS-2 PE=2 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 1.207e-65
Identity = 126/144 (87.50%), Postives = 130/144 (90.28%), Query Frame = -1
Query:  255 AGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEIVKPLK*EK 686
            AGLTGRKIIIDTY            GKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPD+EIL+IVKE FDFRPGMISINLDLKRGGNGRFLKTAAYGHFGR+DPDFTWE+VKPLK EK
Sbjct:    1 AGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDREILQIVKETFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGREDPDFTWEVVKPLKWEK 144          
BLAST of CV885269 vs. ExPASy Swiss-Prot
Match: METK_DICDI (S-adenosylmethionine synthetase OS=Dictyostelium discoideum GN=metK PE=1 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 5.249e-61
Identity = 122/187 (65.24%), Postives = 141/187 (75.40%), Query Frame = -1
Query:  264 VTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEIVKPLK 824
            VTN++I ADLK+ VIK V+P +YLDD TI+HLNPSGRFVIGGP GD+GLTGRKIIID+Y            GKD TKVDRSGAY  R  AKS+VA+GLA RC+VQVSY+IGV +PLSVFVD+YGTGK  D EIL I+  NFD RPG +  +L L R     F KTA+ GHFGR+DPDFTWE VK LK
Sbjct:  200 VTNEQIRADLKELVIKAVVPAQYLDDNTIYHLNPSGRFVIGGPMGDSGLTGRKIIIDSYGGWGAHGGGAFSGKDATKVDRSGAYAARWIAKSLVAAGLADRCLVQVSYSIGVAKPLSVFVDTYGTGKKTDAEILAIIDNNFDLRPGCLMRDLQLTR---PIFQKTASGGHFGRNDPDFTWETVKELK 383          
BLAST of CV885269 vs. ExPASy Swiss-Prot
Match: METK_SYNWW (S-adenosylmethionine synthetase OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=metK PE=3 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 3.084e-53
Identity = 103/181 (56.91%), Postives = 136/181 (75.14%), Query Frame = -1
Query:  282 VTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 824
            V++  I  D+ +HVIK VIP + +D  TIF++NP+GRFVIGGP GD+GLTGRKII+DTY            GKDPTKVDRS +Y++R  AK+IVA+GLA RC +QV+YAIGV  PLS+ V+++GTGKI D +I++++K+NFD RP  I  +LDL+R     + KTAAYGHFGR+D +FTWE
Sbjct:  205 VSSATIEKDIIEHVIKAVIPPEMIDAHTIFYVNPTGRFVIGGPQGDSGLTGRKIIVDTYGGMARHGGGAFSGKDPTKVDRSASYMLRYVAKNIVAAGLAERCEIQVAYAIGVANPLSINVNTFGTGKISDDKIIELIKKNFDLRPAAIIRDLDLRR---PIYRKTAAYGHFGREDAEFTWE 382          
BLAST of CV885269 vs. ExPASy Swiss-Prot
Match: METK_ACACA (S-adenosylmethionine synthetase OS=Acanthamoeba castellanii GN=metK PE=2 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 4.028e-53
Identity = 115/188 (61.17%), Postives = 130/188 (69.15%), Query Frame = -1
Query:  267 VTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGT--GKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEIVKPL 824
            VTN+EI   L + VIKP IP   LD +TIFHLNPSGRFVIGGP G+AGLTG KIIIDTY            GKDP+KVDRS AY  R  AKS+VA GLA R +VQVSYAIGV  PLSVFVDSYGT  G   D+++L I K NFD RPG I  +L L+R     + KTA +GHFGR+DPDF WE  K L
Sbjct:  202 VTNEEIRKRLMEEVIKPSIPAHLLDGETIFHLNPSGRFVIGGPQGEAGLTGGKIIIDTYGGWGAHGGGAFSGKDPSKVDRSAAYAARWIAKSLVARGLANRALVQVSYAIGVSHPLSVFVDSYGTAQGGRTDEDLLAISKSNFDLRPGKIINDLQLRR---PIYEKTAYHGHFGRNDPDFLWEAPKKL 386          
BLAST of CV885269 vs. ExPASy Swiss-Prot
Match: METK_STACT (S-adenosylmethionine synthetase OS=Staphylococcus carnosus (strain TM300) GN=metK PE=3 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 3.410e-52
Identity = 102/183 (55.74%), Postives = 132/183 (72.13%), Query Frame = -1
Query:  276 VTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEIV 824
            VT D+I  D+++HVI P++P   LDD+T F +NP+GRFVIGGP GDAGLTGRKII+DTY            GKDPTKVDRS AY  R  AK+IVA+GLA +C VQ++YAIGV EP+S+ +D++GTGK+P+ ++++ V++NFD RP  I   LDLKR     + +TAAYGHFGR D    WE V
Sbjct:  207 VTLDQIQEDIRKHVIDPIVPASLLDDETKFFINPTGRFVIGGPQGDAGLTGRKIIVDTYGGFARHGGGCFSGKDPTKVDRSAAYAARYVAKNIVAAGLADKCEVQLAYAIGVAEPVSISIDTFGTGKVPESKLVEAVRDNFDLRPAGIIKMLDLKR---PIYKQTAAYGHFGRTDVALPWERV 386          
BLAST of CV885269 vs. ExPASy Swiss-Prot
Match: METK_CALS8 (S-adenosylmethionine synthetase OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=metK PE=3 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 7.597e-52
Identity = 104/181 (57.46%), Postives = 130/181 (71.82%), Query Frame = -1
Query:  282 VTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 824
            VT+ +I AD+ +HVIKP+IP+  LD  T  ++NP+GRFVIGGP GD+GLTGRKII+DTY            GKDPTKVDRS  Y  R  AK+IVA+GLA++C VQ+SYAIGV  PLS+ VD++GTGKI D++I +IVK  FD RP  I  +LDL+R     + K AAYGHFGR+D D  WE
Sbjct:  204 VTHAQIEADVIEHVIKPIIPEGMLDKNTKIYINPTGRFVIGGPQGDSGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSATYAARYVAKNIVAAGLAKKCEVQLSYAIGVARPLSIRVDTFGTGKIDDEKIAEIVKRVFDLRPAAIIRDLDLRR---PIYKKVAAYGHFGREDLDLPWE 381          
BLAST of CV885269 vs. ExPASy Swiss-Prot
Match: METK2_PONAB (S-adenosylmethionine synthetase isoform type-2 OS=Pongo abelii GN=MAT2A PE=2 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 9.922e-52
Identity = 108/184 (58.70%), Postives = 130/184 (70.65%), Query Frame = -1
Query:  264 DEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEIVKPLK 815
            DE+   LK+ VIK V+P KYLD+ TI+HL PSGRFVIGGP GDAGLTGRKII+DTY            GKD TKVDRS AY  R  AKS+V  GL RR +VQVSYAIGV  PLS+ +  YGT +  ++E+L+IVK+NFD RPG+I  +LDLK+     + +TAAYGHFGRD   F WE+ K LK
Sbjct:  216 DEMRDALKEKVIKAVVPAKYLDEDTIYHLQPSGRFVIGGPQGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDYTKVDRSAAYAARWVAKSLVKGGLCRRVLVQVSYAIGVSHPLSISIFHYGTSQKSERELLEIVKKNFDLRPGVIVRDLDLKK---PIYQRTAAYGHFGRD--SFPWEVPKKLK 394          
BLAST of CV885269 vs. ExPASy Swiss-Prot
Match: METK2_MOUSE (S-adenosylmethionine synthetase isoform type-2 OS=Mus musculus GN=Mat2a PE=2 SV=2)

HSP 1 Score: 203.756 bits (517), Expect = 9.922e-52
Identity = 108/184 (58.70%), Postives = 130/184 (70.65%), Query Frame = -1
Query:  264 DEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEIVKPLK 815
            DE+   LK+ VIK V+P KYLD+ TI+HL PSGRFVIGGP GDAGLTGRKII+DTY            GKD TKVDRS AY  R  AKS+V  GL RR +VQVSYAIGV  PLS+ +  YGT +  ++E+L+IVK+NFD RPG+I  +LDLK+     + +TAAYGHFGRD   F WE+ K LK
Sbjct:  216 DEMRDALKEKVIKAVVPAKYLDEDTIYHLQPSGRFVIGGPQGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDYTKVDRSAAYAARWVAKSLVKGGLCRRVLVQVSYAIGVSHPLSISIFHYGTSQKSERELLEIVKKNFDLRPGVIVRDLDLKK---PIYQRTAAYGHFGRD--SFPWEVPKKLK 394          
BLAST of CV885269 vs. ExPASy Swiss-Prot
Match: METK2_MACFA (S-adenosylmethionine synthetase isoform type-2 OS=Macaca fascicularis GN=MAT2A PE=2 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 9.922e-52
Identity = 108/184 (58.70%), Postives = 130/184 (70.65%), Query Frame = -1
Query:  264 DEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEIVKPLK 815
            DE+   LK+ VIK V+P KYLD+ TI+HL PSGRFVIGGP GDAGLTGRKII+DTY            GKD TKVDRS AY  R  AKS+V  GL RR +VQVSYAIGV  PLS+ +  YGT +  ++E+L+IVK+NFD RPG+I  +LDLK+     + +TAAYGHFGRD   F WE+ K LK
Sbjct:  216 DEMRDALKEKVIKAVVPAKYLDEDTIYHLQPSGRFVIGGPQGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDYTKVDRSAAYAARWVAKSLVKGGLCRRVLVQVSYAIGVSHPLSISIFHYGTSQKSERELLEIVKKNFDLRPGVIVRDLDLKK---PIYQRTAAYGHFGRD--SFPWEVPKKLK 394          
The following BLAST results are available for this feature:
BLAST of CV885269 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_OSTTA1.167e-6871.12S-adenosylmethionine synthetase OS=Ostreococcus ta... [more]
METK2_PETCR1.207e-6587.50S-adenosylmethionine synthetase 2 (Fragment) OS=Pe... [more]
METK_DICDI5.249e-6165.24S-adenosylmethionine synthetase OS=Dictyostelium d... [more]
METK_SYNWW3.084e-5356.91S-adenosylmethionine synthetase OS=Syntrophomonas ... [more]
METK_ACACA4.028e-5361.17S-adenosylmethionine synthetase OS=Acanthamoeba ca... [more]
METK_STACT3.410e-5255.74S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_CALS87.597e-5257.46S-adenosylmethionine synthetase OS=Caldicellulosir... [more]
METK2_PONAB9.922e-5258.70S-adenosylmethionine synthetase isoform type-2 OS=... [more]
METK2_MOUSE9.922e-5258.70S-adenosylmethionine synthetase isoform type-2 OS=... [more]
METK2_MACFA9.922e-5258.70S-adenosylmethionine synthetase isoform type-2 OS=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_013F10_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_013_T3_F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885269 ID=CV885269; Name=CV885269; organism=Citrus sinensis; type=EST; length=824bp
AACTCAAAGATCTGCTCATTCTTGTTTTATTCATCAATAAAATTTCAGAA
CAATTCATATCCACCTCTCAATTCATTATGCCTTGCATTGAGAATCCATT
AAACATATTTATAAAAAAAAAAAAAAAAGGAAAAGAAAAAGAAAGAAAGA
AAGAAAACATTCATGTAACTGAAACAAAAGTAAAAAAAAAAGTAGACATA
TATAAGAACCAATGAGAGGCCAGCAGCTCATCCTTGATTAGTTTAAGCTG
GAAGTTTCTCCTACTTGAGTGGCTTAACAATCTCCCAAGTGAAATCAGGA
TCATCTCTGCCAAAGTGCCCATAAGCGGCAGTCTTCAAGAACCTGCCGTT
GCCACCCCTCTTGAGATCAAGATTAATAGAAATCATCCCAGGCCTAAAAT
CAAAATTCTCCTTCACAATCTTCAAAATTTCCTTGTCAGGGATCTTCCCA
GTCCCATAACTATCAACAAAAACTGACAAAGGCTCGGGCACACCAATAGC
GTAAGAAACCTGAACAATGCATCTCCTGGCAAGCCCACTTGCCACAATAC
TCTTAGCAGCTTGCCTTACAATGTAAGCACCGCTTCTATCAACCTTGGTA
GGATCTTTCCCTGAGAAAGCCCCACCGCCGTGTGCCCCCCAGCCACCATA
AGTATCAATAATAATCTTCCGGCCAGTGAGCCCAGCATCACCGTGAGGGC
CACCAATAACAAAACGGCCAGATGGGTTAAGATGGAAAATAGTTTTGTCA
TCCAAGTACTTGTCAGGAATCACAGGCTTGATCACATGTTGCTTGAGATC
TGCCGCAATCTCATCATTAGTTAC
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