CV885262
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV885262 vs. ExPASy Swiss-Prot
Match: VATL2_CAEEL (V-type proton ATPase 16 kDa proteolipid subunit 2/3 OS=Caenorhabditis elegans GN=vha-2 PE=2 SV=2) HSP 1 Score: 111.309 bits (277), Expect = 4.524e-24 Identity = 57/121 (47.11%), Postives = 76/121 (62.81%), Query Frame = -3 Query: 294 SGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXGMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXLYGLIVGIILSS 656 S VG+ SMGVMRPEL+MKS++PV+MAG++GIYGL++A+++ + + Y L G+ G AIGIVGDAGVR AQQP+LFVGM LYG+IV +IL + Sbjct: 40 SAVGICSMGVMRPELIMKSVIPVIMAGIIGIYGLVVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRLFVGMILILIFSEVLGLYGMIVALILGT 160
BLAST of CV885262 vs. ExPASy Swiss-Prot
Match: VATL2_CAEBR (V-type proton ATPase 16 kDa proteolipid subunit 2/3 OS=Caenorhabditis briggsae GN=vha-2 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 4.524e-24 Identity = 57/121 (47.11%), Postives = 76/121 (62.81%), Query Frame = -3 Query: 294 SGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXGMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXLYGLIVGIILSS 656 S VG+ SMGVMRPEL+MKS++PV+MAG++GIYGL++A+++ + + Y L G+ G AIGIVGDAGVR AQQP+LFVGM LYG+IV +IL + Sbjct: 40 SAVGICSMGVMRPELIMKSVIPVIMAGIIGIYGLVVAMVLKGKVQAASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRLFVGMILILIFSEVLGLYGMIVALILGT 160
BLAST of CV885262 vs. ExPASy Swiss-Prot
Match: VATL_DROME (V-type proton ATPase 16 kDa proteolipid subunit OS=Drosophila melanogaster GN=Vha16 PE=1 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 5.909e-24 Identity = 61/122 (50.00%), Postives = 78/122 (63.93%), Query Frame = -3 Query: 291 SGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXGMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXLYGLIVGIILSSR 656 SG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL++AV+I+ + +K Y L+ G+ G AIGIVGDAGVR AQQP+LFVGM LYGLIV I L ++ Sbjct: 39 SGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIAGALEEPSK-YSLYRGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYLYTK 159
BLAST of CV885262 vs. ExPASy Swiss-Prot
Match: VATL_TORMA (V-type proton ATPase 16 kDa proteolipid subunit OS=Torpedo marmorata PE=1 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.316e-23 Identity = 61/122 (50.00%), Postives = 77/122 (63.11%), Query Frame = -3 Query: 291 SGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXGMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXLYGLIVGIILSSR 656 SG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL++AV+I+ N + LF + G AIGIVGDAGVR AQQP+LFVGM LYGLIV +ILS++ Sbjct: 36 SGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIA---NSLTEDISLFKSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVALILSTK 154
BLAST of CV885262 vs. ExPASy Swiss-Prot
Match: VATL_NEPNO (V-type proton ATPase 16 kDa proteolipid subunit OS=Nephrops norvegicus PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.719e-23 Identity = 60/122 (49.18%), Postives = 79/122 (64.75%), Query Frame = -3 Query: 291 SGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXGMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXLYGLIVGIILSSR 656 SGVG+++M VMRPEL+MK I+PVVMAG++ IYGL++AV+I+ G +A +Y L+ G+ G AIGIVGDAGVR AQQP+L+VGM LYGLIV I L ++ Sbjct: 36 SGVGISAMSVMRPELIMKCIIPVVMAGIIAIYGLVVAVLIA-GKLDEAPTYTLYQGFVHMGAGLSVGLSGLAAGFAIGIVGDAGVRGTAQQPRLYVGMILILIFAEVLGLYGLIVAIFLYTK 156
BLAST of CV885262 vs. ExPASy Swiss-Prot
Match: VATL_SHEEP (V-type proton ATPase 16 kDa proteolipid subunit OS=Ovis aries GN=ATP6V0C PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.933e-23 Identity = 59/122 (48.36%), Postives = 77/122 (63.11%), Query Frame = -3 Query: 291 SGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXGMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXLYGLIVGIILSSR 656 SG G+A+M VMRPE++MKSI+PVVMAG++ IYGL++AV+I+ +N L+ + G AIGIVGDAGVR AQQP+LFVGM LYGLIV +ILS++ Sbjct: 37 SGTGIAAMSVMRPEMIMKSIIPVVMAGIIAIYGLVVAVLIANSLN---DGISLYRSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVALILSTK 155
BLAST of CV885262 vs. ExPASy Swiss-Prot
Match: VATL_BOVIN (V-type proton ATPase 16 kDa proteolipid subunit OS=Bos taurus GN=ATP6V0C PE=1 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.933e-23 Identity = 59/122 (48.36%), Postives = 77/122 (63.11%), Query Frame = -3 Query: 291 SGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXGMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXLYGLIVGIILSSR 656 SG G+A+M VMRPE++MKSI+PVVMAG++ IYGL++AV+I+ +N L+ + G AIGIVGDAGVR AQQP+LFVGM LYGLIV +ILS++ Sbjct: 37 SGTGIAAMSVMRPEMIMKSIIPVVMAGIIAIYGLVVAVLIANSLN---DGISLYRSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVALILSTK 155
BLAST of CV885262 vs. ExPASy Swiss-Prot
Match: VATL_HUMAN (V-type proton ATPase 16 kDa proteolipid subunit OS=Homo sapiens GN=ATP6V0C PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.002e-23 Identity = 59/122 (48.36%), Postives = 76/122 (62.30%), Query Frame = -3 Query: 291 SGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXGMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXLYGLIVGIILSSR 656 SG G+A+M VMRPE +MKSI+PVVMAG++ IYGL++AV+I+ +N L+ + G AIGIVGDAGVR AQQP+LFVGM LYGLIV +ILS++ Sbjct: 37 SGTGIAAMSVMRPEQIMKSIIPVVMAGIIAIYGLVVAVLIANSLNDDIS---LYKSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVALILSTK 155
BLAST of CV885262 vs. ExPASy Swiss-Prot
Match: VATL_RAT (V-type proton ATPase 16 kDa proteolipid subunit OS=Rattus norvegicus GN=Atp6v0c PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 6.533e-23 Identity = 60/122 (49.18%), Postives = 76/122 (62.30%), Query Frame = -3 Query: 291 SGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXGMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXLYGLIVGIILSSR 656 SG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL++AV+I+ N L+ + G AIGIVGDAGVR AQQP+LFVGM LYGLIV +ILS++ Sbjct: 37 SGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIA---NSLTDGITLYRSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVALILSTK 155
BLAST of CV885262 vs. ExPASy Swiss-Prot
Match: VATL_MOUSE (V-type proton ATPase 16 kDa proteolipid subunit OS=Mus musculus GN=Atp6v0c PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 6.533e-23 Identity = 60/122 (49.18%), Postives = 76/122 (62.30%), Query Frame = -3 Query: 291 SGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXGMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXLYGLIVGIILSSR 656 SG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL++AV+I+ N L+ + G AIGIVGDAGVR AQQP+LFVGM LYGLIV +ILS++ Sbjct: 37 SGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIA---NSLTDGITLYRSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVALILSTK 155 The following BLAST results are available for this feature:
BLAST of CV885262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
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Sequences
The
following sequences are available for this feature:
EST sequence >CV885262 ID=CV885262; Name=CV885262; organism=Citrus sinensis; type=EST; length=658bpback to top |