CV885257
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV885257 vs. ExPASy Swiss-Prot
Match: RAB3A_HUMAN (Ras-related protein Rab-3A OS=Homo sapiens GN=RAB3A PE=1 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 3.665e-40 Identity = 82/176 (46.59%), Postives = 117/176 (66.48%), Query Frame = 1 Query: 196 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLAESDSKSEP 723 + K+L+IG+S VGK+ L R K++TI + KRIKLQIWDTAGQER+RTITTAYYRGAMG +L+YD+T+E SFN +++W I+ ++ DN +LVGNK DM E +R V + +G+ LAD G +FFE SAK N+NV++ F + I ++++ES ++P Sbjct: 22 MFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDM-EDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESLDTADP 196
BLAST of CV885257 vs. ExPASy Swiss-Prot
Match: RAB3A_BOVIN (Ras-related protein Rab-3A OS=Bos taurus GN=RAB3A PE=1 SV=3) HSP 1 Score: 165.236 bits (417), Expect = 3.665e-40 Identity = 82/176 (46.59%), Postives = 117/176 (66.48%), Query Frame = 1 Query: 196 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLAESDSKSEP 723 + K+L+IG+S VGK+ L R K++TI + KRIKLQIWDTAGQER+RTITTAYYRGAMG +L+YD+T+E SFN +++W I+ ++ DN +LVGNK DM E +R V + +G+ LAD G +FFE SAK N+NV++ F + I ++++ES ++P Sbjct: 22 MFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDM-EDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESLDTADP 196
BLAST of CV885257 vs. ExPASy Swiss-Prot
Match: RAB35_RAT (Ras-related protein Rab-35 OS=Rattus norvegicus GN=Rab35 PE=2 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 3.665e-40 Identity = 88/187 (47.06%), Postives = 119/187 (63.64%), Query Frame = 1 Query: 196 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDI----KQRLAESDSKSEPQTIKINQ 744 L KLL+IGDSGVGKS LLLR KIRT+E++G+++KLQIWDTAGQERFRTIT+ YYRG G+++VYDVT SF N++ W+ I Q+ D+V +ILVGNK D D ++ V T A + GI+ FETSAK N+NVEE+F I + + K LA+ + + +K+ + Sbjct: 8 LFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNC-DDVCRILVGNKND-DPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQQQQQQNDVVKLTK 192
BLAST of CV885257 vs. ExPASy Swiss-Prot
Match: RAB35_MOUSE (Ras-related protein Rab-35 OS=Mus musculus GN=Rab35 PE=1 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 3.665e-40 Identity = 88/187 (47.06%), Postives = 119/187 (63.64%), Query Frame = 1 Query: 196 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDI----KQRLAESDSKSEPQTIKINQ 744 L KLL+IGDSGVGKS LLLR KIRT+E++G+++KLQIWDTAGQERFRTIT+ YYRG G+++VYDVT SF N++ W+ I Q+ D+V +ILVGNK D D ++ V T A + GI+ FETSAK N+NVEE+F I + + K LA+ + + +K+ + Sbjct: 8 LFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNC-DDVCRILVGNKND-DPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQQQQQQNDVVKLTK 192
BLAST of CV885257 vs. ExPASy Swiss-Prot
Match: RAB35_HUMAN (Ras-related protein Rab-35 OS=Homo sapiens GN=RAB35 PE=1 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 3.665e-40 Identity = 88/187 (47.06%), Postives = 119/187 (63.64%), Query Frame = 1 Query: 196 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDI----KQRLAESDSKSEPQTIKINQ 744 L KLL+IGDSGVGKS LLLR KIRT+E++G+++KLQIWDTAGQERFRTIT+ YYRG G+++VYDVT SF N++ W+ I Q+ D+V +ILVGNK D D ++ V T A + GI+ FETSAK N+NVEE+F I + + K LA+ + + +K+ + Sbjct: 8 LFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNC-DDVCRILVGNKND-DPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQQQQQQNDVVKLTK 192
BLAST of CV885257 vs. ExPASy Swiss-Prot
Match: RAB3C_HUMAN (Ras-related protein Rab-3C OS=Homo sapiens GN=RAB3C PE=2 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 4.786e-40 Identity = 82/170 (48.24%), Postives = 114/170 (67.06%), Query Frame = 1 Query: 196 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLAES 705 + KLL+IG+S VGK+ L R K++T+ + KRIKLQIWDTAGQER+RTITTAYYRGAMG +L+YD+T+E SFN +++W I+ ++ DN ILVGNK DM E +R + T +GQ L ++ G +FFETSAK N+NV++ F + I +++ES Sbjct: 30 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILVGNKCDM-EDERVISTERGQHLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSES 198
BLAST of CV885257 vs. ExPASy Swiss-Prot
Match: RAB3C_BOVIN (Ras-related protein Rab-3C OS=Bos taurus GN=RAB3C PE=2 SV=3) HSP 1 Score: 164.851 bits (416), Expect = 4.786e-40 Identity = 82/170 (48.24%), Postives = 114/170 (67.06%), Query Frame = 1 Query: 196 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLAES 705 + KLL+IG+S VGK+ L R K++T+ + KRIKLQIWDTAGQER+RTITTAYYRGAMG +L+YD+T+E SFN +++W I+ ++ DN ILVGNK DM E +R + T +GQ L ++ G +FFETSAK N+NV++ F + I +++ES Sbjct: 30 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILVGNKCDM-EDERVISTERGQHLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSES 198
BLAST of CV885257 vs. ExPASy Swiss-Prot
Match: RAB3B_MOUSE (Ras-related protein Rab-3B OS=Mus musculus GN=Rab3b PE=1 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 6.251e-40 Identity = 81/170 (47.65%), Postives = 113/170 (66.47%), Query Frame = 1 Query: 196 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLAES 705 + KLL+IG+S VGK+ L R K++T+ KR+KLQIWDTAGQER+RTITTAYYRGAMG +L+YD+T+E SFN +++W I+ ++ DN ILVGNK DM+E +R VPT KG+ LA++ G FFE SAK N++V + F + I ++++S Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVGNKCDMEE-ERVVPTEKGRLLAEQLGFDFFEASAKENISVRQAFERLVDAICDKMSDS 190
BLAST of CV885257 vs. ExPASy Swiss-Prot
Match: RAB3B_MESAU (Ras-related protein Rab-3B OS=Mesocricetus auratus GN=RAB3B PE=2 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 6.251e-40 Identity = 81/170 (47.65%), Postives = 113/170 (66.47%), Query Frame = 1 Query: 196 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLAES 705 + KLL+IG+S VGK+ L R K++T+ KR+KLQIWDTAGQER+RTITTAYYRGAMG +L+YD+T+E SFN +++W I+ ++ DN ILVGNK DM+E +R VPT KG+ LA++ G FFE SAK N++V + F + I ++++S Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVGNKCDMEE-ERVVPTEKGRLLAEQLGFDFFEASAKENISVRQAFERLVDAICDKMSDS 190
BLAST of CV885257 vs. ExPASy Swiss-Prot
Match: RAB3C_RAT (Ras-related protein Rab-3C OS=Rattus norvegicus GN=Rab3c PE=1 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 8.164e-40 Identity = 82/170 (48.24%), Postives = 113/170 (66.47%), Query Frame = 1 Query: 196 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLAES 705 + KLL+IG+S VGK+ L R K++T+ + KRIKLQIWDTAGQER+RTITTAYYRGAMG +L+YD+T+E SFN +++W I+ ++ DN IL GNK DM E +R V T +GQ L ++ G +FFETSAK N+NV++ F + I +++ES Sbjct: 30 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILAGNKCDM-EDERVVSTERGQRLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSES 198 The following BLAST results are available for this feature:
BLAST of CV885257 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV885257 ID=CV885257; Name=CV885257; organism=Citrus sinensis; type=EST; length=792bpback to top |