CV885204
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV885204 vs. ExPASy Swiss-Prot
Match: RTNLJ_ARATH (Reticulon-like protein B10 OS=Arabidopsis thaliana GN=RTNLB10 PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.531e-25 Identity = 57/161 (35.40%), Postives = 90/161 (55.90%), Query Frame = -3 Query: 319 VLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVLFLWSNASTFINKSPPRIPEVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDAKVLSKI 801 +LG T +W LF+ Y V + ++++ +LFLW+ ++ N+ P++P + I EE V +A A+R IN + REI GR+ K+ V LW VS VG++ NFLT+ Y+ VL +P +YE+Y+D +D I+ QY D ++L KI Sbjct: 29 LLGSTTLLWFLFEKCGYSFFPFVVNTQLLSVVILFLWAKSAILFNRPMPQLPNLEITEEFVFMVADAIRVWINTVLAVAREIYVGRNAKQLFRVSVVLWTVSFVGNFLNFLTILYLGVVLSLLIPFLYERYQDLIDEKLSLTHRVIQTQYRKIDERLLQKI 189
BLAST of CV885204 vs. ExPASy Swiss-Prot
Match: RTNLK_ARATH (Reticulon-like protein B11 OS=Arabidopsis thaliana GN=RTNLB11 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.277e-21 Identity = 58/170 (34.12%), Postives = 93/170 (54.71%), Query Frame = -3 Query: 292 VLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVLFLWSNASTFINKSPPRIPEVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDAKVLSKIPRSLKDKKK 801 +L +T W LF+ Y+LL+ V + L++ +A+ FLW+ ++T +N+ P +P + IPEE + A LR IN ++ +I R+ + L V LW +S VG+ N LTL YI +L + P++YEKY+D +D EK + K F + K P + +KK Sbjct: 37 LLISSTGFWFLFERAGYNLLSFVSNVLLLLVAIFFLWAKSATVLNRPLPPVPNMEIPEEFANKAADDLRVWINYVLSIASDITIARNPIRLLQVSLVLWAISYVGTLINSLTLVYIGVLLSLSFPIVYEKYQDHID---EKVNSTSK-----FVRNISRKFPLPINKEKK 198
BLAST of CV885204 vs. ExPASy Swiss-Prot
Match: RTNLP_ARATH (Reticulon-like protein B16 OS=Arabidopsis thaliana GN=RTNLB16 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 6.891e-21 Identity = 50/175 (28.57%), Postives = 93/175 (53.14%), Query Frame = -3 Query: 298 KKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVLFLWSNASTFINKSPPRIPEVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDAKVLSKIPRSL-KDK 819 + +S GV+ +T W++F+ L++ L++ + + F+ + S F N+ +PE+ + EE V A++ R ++N + ++ G D + F V+ LW++S +GS+ + TL YI +L T+P +Y KY+ +VD + Y + D V+S++ SL KDK Sbjct: 50 RHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFRNRQLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFFKVVICLWLLSAIGSYISLCTLLYIGTILSVTIPALYSKYQSKVDKCCGTIHRRLSHHYKIVDENVISRLSWSLSKDK 224
BLAST of CV885204 vs. ExPASy Swiss-Prot
Match: RTNLO_ARATH (Reticulon-like protein B15 OS=Arabidopsis thaliana GN=RTNLB15 PE=2 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 1.176e-20 Identity = 60/173 (34.68%), Postives = 97/173 (56.07%), Query Frame = -3 Query: 304 KISAGV-LGGATAIWVLFQLLEYHLLTLVCHCLIVALAVLFLWSN-ASTFINKSPPRIPEVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDAKVLSKIPRSLK 816 KI++G+ L AT W L + +E L+ L+C L++ + +LFLW+ F + PP E+ P+ P+ L S + + +L EIA G+D K FL I + ++ +GS+ + LT+ YI V T+PV+Y ++++ +DSF K E VF +V+SKIPR+ K Sbjct: 22 KINSGITLVMATLFWFLLEFMEARLVPLLCSILLLLMLILFLWAKFGEVFFTRRPPTPEELNQPDSPLKALFSMMEGHL----LMLYEIAYGKDNKTFLKTILYVAIIYNIGSYISLLTILYICLVCSMTIPVVYMQFQELIDSFMGKVSEEKNNLLEVF-KQVVSKIPRAPK 189
BLAST of CV885204 vs. ExPASy Swiss-Prot
Match: RTNLL_ARATH (Reticulon-like protein B12 OS=Arabidopsis thaliana GN=RTNLB12 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.420e-20 Identity = 45/141 (31.91%), Postives = 83/141 (58.87%), Query Frame = -3 Query: 397 KKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVLFLWSNASTFINKSPPRIPEVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRV 819 K +S G++ A W++F+ Y + TL+ L++ L++LFLWS +++ +N+ P +PE I E + + LR +N+ + +IA RD + + V L+++S++GS +F TL + +++ TVP YE+YED + Sbjct: 33 KNVSVGIVTVTIASWMVFEAFAYTIFTLISSVLLLLLSILFLWSKSASILNRPSPPLPEFQISEAMAEEASIWLRIHVNKLLQVSHDIAMARDSELYTKVAVSLFLLSLIGSLMDFQTLCHTSVLVVMTVPAFYERYEDYI 173
BLAST of CV885204 vs. ExPASy Swiss-Prot
Match: RTNLM_ARATH (Reticulon-like protein B13 OS=Arabidopsis thaliana GN=RTNLB13 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.790e-11 Identity = 40/179 (22.35%), Postives = 85/179 (47.49%), Query Frame = -3 Query: 292 KKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVLFLWSNASTFINKSPPRIPEVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDAKVL---SKIPRSLKDKKK 819 KK++ L +T+ W+L + +T+V I ++++FLW + ++K P + + + EE V++ + R + + + + + F + G W++S +G+ +F T +I V+ TVP ++E+Y D++ + K Y K+L +K+ ++K K Sbjct: 25 KKLAFSTLLVSTSTWILLSFYGFTTITIVSWIGIAVVSMIFLWGSLLRLLSKVEPELSGLEVSEEFVVETVRSCRMLMEEMVRWMFRVGAESEWFVFARTVLGFWILSRIGNLLDFHTCLFIGLVMGLTVPKLWEEYGDQIQKHLGSLKDKSKGAYNTTHEKILEMKNKLHHGTEEKVK 203 The following BLAST results are available for this feature:
BLAST of CV885204 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >CV885204 ID=CV885204; Name=CV885204; organism=Citrus sinensis; type=EST; length=821bpback to top |