CV885195
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV885195 vs. ExPASy Swiss-Prot
Match: TBB_STYLE (Tubulin beta chain OS=Stylonychia lemnae GN=TUBB1 PE=3 SV=1) HSP 1 Score: 512.686 bits (1319), Expect = 1.163e-144 Identity = 247/285 (86.67%), Postives = 258/285 (90.53%), Query Frame = 1 Query: 52 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALT 906 MREI+HIQGGQCGNQIGAKFWEVI DEHGID TG Y GDSDLQLERINVYYNEA+GGRYVPRAVLMDLEPGTMDSVR+GPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAE CDCLQGFQ+ H ISK+REEYPDR+M TFSV PSPKVSDTVVEPYNATLSVHQLVENADE M +DNEALYDICFRTLKL TPT+GDLNHL+SA +SGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFM GFAPLTSRGSQQYRALT Sbjct: 1 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGRYVPRAVLMDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAEGCDCLQGFQITHSLGGGTGSGMGTLLISKVREEYPDRIMATFSVVPSPKVSDTVVEPYNATLSVHQLVENADEVMCIDNEALYDICFRTLKLTTPTYGDLNHLVSAGISGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMTGFAPLTSRGSQQYRALT 285
BLAST of CV885195 vs. ExPASy Swiss-Prot
Match: TBB1_ANEPH (Tubulin beta-1 chain OS=Anemia phyllitidis GN=TUBB1 PE=2 SV=1) HSP 1 Score: 512.301 bits (1318), Expect = 1.519e-144 Identity = 250/285 (87.72%), Postives = 257/285 (90.18%), Query Frame = 1 Query: 52 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALT 906 MREILH+QGGQCGNQIGAKFWEV+C EHGID TG Y GDS+ QLER+NVYYNEAS GRYVPRAVLMDLEPGTMDSVRSG +GQIFRPDNFVFGQSGAGNNWAKG YTEGAELIDSVL VVRKEAENCDCLQGFQVCH ISKIREEYPDRMM+TFSVF SPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDI RTLKL TPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQY +LT Sbjct: 1 MREILHVQGGQCGNQIGAKFWEVVCTEHGIDPTGTYRGDSETQLERVNVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGHYGQIFRPDNFVFGQSGAGNNWAKGXYTEGAELIDSVLAVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFASPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDIXLRTLKLVTPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYXSLT 285
BLAST of CV885195 vs. ExPASy Swiss-Prot
Match: TBB_EUPOC (Tubulin beta chain OS=Euplotes octocarinatus PE=3 SV=1) HSP 1 Score: 511.531 bits (1316), Expect = 2.591e-144 Identity = 245/285 (85.96%), Postives = 260/285 (91.23%), Query Frame = 1 Query: 52 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALT 906 MREI+H+QGGQCGNQIGAKFWEVI DEHG++ TG Y GDSDLQLERINVYYNEA+GGRYVPRAVLMDLEPGTMDSVR+GPFGQ+FRPDNFVFGQ+GAGNNWAKGHYTEGAELIDSVLDVVRKEAE CDCLQGFQ+ H ISKIREEYPDR+M TFSVFPSPKVSDTVVEPYNATLSVHQLVENADE MV+DNEALYDICFRTLKL TPT+GDLNHL+SA +SGVT CLRFPGQLNSDLRKLAVNLIPFPRLHFFM+GFAPLTSRGSQQYRALT Sbjct: 1 MREIVHVQGGQCGNQIGAKFWEVISDEHGVEPTGAYHGDSDLQLERINVYYNEATGGRYVPRAVLMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAEGCDCLQGFQITHSLGGGTGSGMGTLLISKIREEYPDRIMETFSVFPSPKVSDTVVEPYNATLSVHQLVENADEVMVIDNEALYDICFRTLKLTTPTYGDLNHLVSACISGVTACLRFPGQLNSDLRKLAVNLIPFPRLHFFMIGFAPLTSRGSQQYRALT 285
BLAST of CV885195 vs. ExPASy Swiss-Prot
Match: TBB_TOXGO (Tubulin beta chain OS=Toxoplasma gondii PE=3 SV=1) HSP 1 Score: 509.99 bits (1312), Expect = 7.540e-144 Identity = 241/285 (84.56%), Postives = 260/285 (91.23%), Query Frame = 1 Query: 52 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALT 906 MREI+H+QGGQCGNQIGAKFWEVI DEHGID TG Y GDSDLQLERINV+YNEA+GGR+VPRA+LMDLEPGTMDSVR+GPFGQ+FRPDNFVFGQ+GAGNNWAKGHYTEGAELIDSVLDVVRKEAE CDCLQGFQ+ H ISK+REEYPDR+M TFSVFPSPKVSDTVVEPYNATLSVHQLVENADE V+DNEALYDICFRTLKL TPT+GDLNHL+SA MSGVTCCLRFPGQLNSDLRKLAVNL+PFPRLHFF++GFAPLTSRGSQQYRAL+ Sbjct: 1 MREIVHVQGGQCGNQIGAKFWEVISDEHGIDPTGTYCGDSDLQLERINVFYNEATGGRFVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAEGCDCLQGFQITHSLGGGTGSGMGTLLISKVREEYPDRIMETFSVFPSPKVSDTVVEPYNATLSVHQLVENADEVQVIDNEALYDICFRTLKLTTPTYGDLNHLVSAAMSGVTCCLRFPGQLNSDLRKLAVNLVPFPRLHFFLIGFAPLTSRGSQQYRALS 285
BLAST of CV885195 vs. ExPASy Swiss-Prot
Match: TBB_EIMTE (Tubulin beta chain OS=Eimeria tenella PE=2 SV=1) HSP 1 Score: 506.523 bits (1303), Expect = 8.336e-143 Identity = 243/285 (85.26%), Postives = 258/285 (90.53%), Query Frame = 1 Query: 52 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALT 906 MREI+H+QGGQCGNQIGAKFWEVI DEHGI TG Y GDSDLQLERI+V+YNEA+GGRYVPRAVLMDLEPGTMDSVRSGPFGQ+FRPDNFVFGQ+GAGNNWAKGHYTEGAELIDSVLDVVRKEAE CDCLQGFQV H ISK+REEYPDR+M TFSVFPSPKVSDTVVEPYNATLSVHQLVENADE V+DNEALYDICFRTLKL TPT+GDLNHL+SA MSGVTC LRFPGQLNSDLRKLAVNL+PFPRLHFF++GFAPLTSRGSQQYRALT Sbjct: 1 MREIVHVQGGQCGNQIGAKFWEVISDEHGIAPTGTYKGDSDLQLERISVFYNEATGGRYVPRAVLMDLEPGTMDSVRSGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAEGCDCLQGFQVTHSLGGGTGSGMGTLLISKVREEYPDRIMETFSVFPSPKVSDTVVEPYNATLSVHQLVENADEVQVIDNEALYDICFRTLKLTTPTYGDLNHLVSAAMSGVTCSLRFPGQLNSDLRKLAVNLVPFPRLHFFLIGFAPLTSRGSQQYRALT 285
BLAST of CV885195 vs. ExPASy Swiss-Prot
Match: TBB_PLAFK (Tubulin beta chain OS=Plasmodium falciparum (isolate K1 / Thailand) PE=3 SV=2) HSP 1 Score: 504.212 bits (1297), Expect = 4.137e-142 Identity = 241/285 (84.56%), Postives = 258/285 (90.53%), Query Frame = 1 Query: 52 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALT 906 MREI+HIQ GQCGNQIGAKFWEVI DEHGID +G Y GDSDLQLER++V+YNEA+GGRYVPRA+LMDLEPGTMDSVR+GPFGQ+FRPDNFVFGQ+GAGNNWAKGHYTEGAELID+VLDVVRKEAE CDCLQGFQ+ H ISKIREEYPDR+M TFSVFPSPKVSDTVVEPYNATLSVHQLVENADE V+DNEALYDICFRTLKL TPT+GDLNHL+SA MSGVTC LRFPGQLNSDLRKLAVNLIPFPRLHFFM+GFAPLTSRGSQQYRALT Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPSGTYCGDSDLQLERVDVFYNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDAVLDVVRKEAEGCDCLQGFQITHSLGGGTGSGMGTLLISKIREEYPDRIMETFSVFPSPKVSDTVVEPYNATLSVHQLVENADEVQVIDNEALYDICFRTLKLTTPTYGDLNHLVSAAMSGVTCSLRFPGQLNSDLRKLAVNLIPFPRLHFFMIGFAPLTSRGSQQYRALT 285
BLAST of CV885195 vs. ExPASy Swiss-Prot
Match: TBB_PLAF7 (Tubulin beta chain OS=Plasmodium falciparum (isolate 3D7) GN=PF10_0084 PE=3 SV=1) HSP 1 Score: 504.212 bits (1297), Expect = 4.137e-142 Identity = 241/285 (84.56%), Postives = 258/285 (90.53%), Query Frame = 1 Query: 52 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALT 906 MREI+HIQ GQCGNQIGAKFWEVI DEHGID +G Y GDSDLQLER++V+YNEA+GGRYVPRA+LMDLEPGTMDSVR+GPFGQ+FRPDNFVFGQ+GAGNNWAKGHYTEGAELID+VLDVVRKEAE CDCLQGFQ+ H ISKIREEYPDR+M TFSVFPSPKVSDTVVEPYNATLSVHQLVENADE V+DNEALYDICFRTLKL TPT+GDLNHL+SA MSGVTC LRFPGQLNSDLRKLAVNLIPFPRLHFFM+GFAPLTSRGSQQYRALT Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPSGTYCGDSDLQLERVDVFYNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDAVLDVVRKEAEGCDCLQGFQITHSLGGGTGSGMGTLLISKIREEYPDRIMETFSVFPSPKVSDTVVEPYNATLSVHQLVENADEVQVIDNEALYDICFRTLKLTTPTYGDLNHLVSAAMSGVTCSLRFPGQLNSDLRKLAVNLIPFPRLHFFMIGFAPLTSRGSQQYRALT 285
BLAST of CV885195 vs. ExPASy Swiss-Prot
Match: TBB_PLAFA (Tubulin beta chain OS=Plasmodium falciparum PE=3 SV=1) HSP 1 Score: 503.442 bits (1295), Expect = 7.057e-142 Identity = 241/285 (84.56%), Postives = 258/285 (90.53%), Query Frame = 1 Query: 52 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALT 906 MREI+HIQ GQCGNQIGAKFWEVI DEHGID +G YSGDSDLQLER++V+YNEA+GGRYVPRA+LMDLEPGTMDSVR+GPFGQ+FRPDNFVFGQ+GAGNNWAKGHYTEGAELID+VLDV+RKEAE CDCLQGFQ+ H ISKIREEYPDR+M TFSVFPSPKVSDTVVEPYNATLSVHQLVENADE V+DNEALYDICFRTLKL TPT+GDLNHL+SA MSGVTC LRFPGQLNSDLRKLAVNLIPFPRLHFFM GFAPLTSRGSQQYRALT Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPSGTYSGDSDLQLERVDVFYNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDAVLDVLRKEAEGCDCLQGFQITHSLGGGTGSGMGTLLISKIREEYPDRIMETFSVFPSPKVSDTVVEPYNATLSVHQLVENADEVQVIDNEALYDICFRTLKLTTPTYGDLNHLVSAAMSGVTCSLRFPGQLNSDLRKLAVNLIPFPRLHFFMYGFAPLTSRGSQQYRALT 285
BLAST of CV885195 vs. ExPASy Swiss-Prot
Match: TBB_BABBO (Tubulin beta chain OS=Babesia bovis PE=3 SV=1) HSP 1 Score: 503.442 bits (1295), Expect = 7.057e-142 Identity = 242/285 (84.91%), Postives = 258/285 (90.53%), Query Frame = 1 Query: 52 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALT 906 MREI+HIQ GQCGNQIGAKFWEVI DEHGID +G Y GDSDLQLERI+V+YNEA+GGRYVPRAVLMDLEPGTMDSVR+GPFGQ+FRPDNFVFGQ+GAGNNWAKGHYTEGAELIDSVLDVVRKEAE CDCLQGFQ+ H ISKIREEYPDR+M TFSVFPSPKVSDTVVEPYNATLSVHQLVENADE V+DNEALYDICFRTLKL TPT+GDLNHL+SA MSGVTC LRFPGQLNSDLRKLAVNLIPFPRLHFFM+GFAPLTSRGSQQ+RAL+ Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDQSGTYHGDSDLQLERIDVFYNEATGGRYVPRAVLMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAEGCDCLQGFQITHSLGGGTGSGMGTLLISKIREEYPDRIMETFSVFPSPKVSDTVVEPYNATLSVHQLVENADEVQVIDNEALYDICFRTLKLTTPTYGDLNHLVSAAMSGVTCSLRFPGQLNSDLRKLAVNLIPFPRLHFFMIGFAPLTSRGSQQHRALS 285
BLAST of CV885195 vs. ExPASy Swiss-Prot
Match: TBB4_OOMCK (Tubulin beta-4 chain OS=Oomycete-like sp. (strain MacKay2000) GN=TUBB4 PE=3 SV=1) HSP 1 Score: 503.056 bits (1294), Expect = 9.217e-142 Identity = 243/285 (85.26%), Postives = 258/285 (90.53%), Query Frame = 1 Query: 52 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALT 906 MREI+HIQGGQCG+QIGAKFWEVI DEHGID TG Y+GDSDLQLER+NVYYNEA+GGRYVPRAVLMDLEPGTMDSVR+GP+GQ+FRPDNFVFGQ+GAGNNWAKGHYTEGAELIDSVLDVVRKEAE CDCLQGFQV H ISKIREEYPDR+M+TFSV PSPKVSDTVVEPYNATLSVHQLVENADE MVLDNEALYDICFRTLKL TPT+GDLNHL+ MSGVT LRFPGQLN+DLRKLAVNLIPFPRLHFFM+GFAPLTSRGSQQYRALT Sbjct: 1 MREIVHIQGGQCGDQIGAKFWEVISDEHGIDPTGTYNGDSDLQLERVNVYYNEATGGRYVPRAVLMDLEPGTMDSVRAGPYGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAEQCDCLQGFQVTHSLGGGTGSGMGTLLISKIREEYPDRVMMTFSVCPSPKVSDTVVEPYNATLSVHQLVENADEVMVLDNEALYDICFRTLKLTTPTYGDLNHLVCVCMSGVTSSLRFPGQLNADLRKLAVNLIPFPRLHFFMLGFAPLTSRGSQQYRALT 285 The following BLAST results are available for this feature:
BLAST of CV885195 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 425
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV885195 ID=CV885195; Name=CV885195; organism=Citrus sinensis; type=EST; length=907bpback to top |