CV885190

Overview
NameCV885190
Unique NameCV885190
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length844
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885190 vs. ExPASy Swiss-Prot
Match: GLGA1_ANASP (Glycogen synthase 1 OS=Anabaena sp. (strain PCC 7120) GN=glgA1 PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 7.875e-20
Identity = 60/158 (37.97%), Postives = 88/158 (55.70%), Query Frame = -3
Query:  372 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQ-ALAEMMKNGMAQDLSWKGPAKKWEE 824
            + Q ++LGTG +  E Q+ QL   YP +      +N  L+  I AG D  L+PSRFEPCG+ Q+ A+RYG++PIV  TGGLVDTV       E  TG+    +       +P+D   + T + RA   +  +    E+ K GM+QD SW   AK++++
Sbjct:  302 DAQFVLLGTGDRYYETQMWQLASRYPGRMATYLLYNDALSRRIYAGTDAFLMPSRFEPCGISQMMALRYGSIPIVRRTGGLVDTVSHHDPINEAGTGYCFDRY-------EPLD---LFTCMIRAWEGFRYKPQWQELQKRGMSQDFSWYKSAKEYDK 449          
BLAST of CV885190 vs. ExPASy Swiss-Prot
Match: GLGA_STRSV (Glycogen synthase OS=Streptococcus sanguinis (strain SK36) GN=glgA PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.029e-19
Identity = 61/169 (36.09%), Postives = 87/169 (51.48%), Query Frame = -3
Query:  357 HFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE------GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG--TQALAEMMKNGMAQDLSWKGPAKKWEETLLNL 839
            + ++E+VQII+LGTG    E+        YP+K      F++ LA  I A +D  L+PSRFEPCGL Q+ AMRYGT+P+V   GGL DTVE         TGF   +FS             ++ T + AL  Y    +A   + +  M +D SW   +K + +   +L
Sbjct:  317 NLLQEDVQIILLGTGDPAFEQAFAWFGHAYPDKLSANILFDVTLAQEIYAASDIFLMPSRFEPCGLSQMMAMRYGTLPLVHEVGGLRDTVEPYNVYTGKGTGFSFNNFS----------GYWLTWTFKEALKLYADDKEAWKSLQEQAMERDFSWDTASKAYSDLYQSL 475          
BLAST of CV885190 vs. ExPASy Swiss-Prot
Match: GLGA_PROMM (Glycogen synthase OS=Prochlorococcus marinus (strain MIT 9313) GN=glgA PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.343e-19
Identity = 62/150 (41.33%), Postives = 83/150 (55.33%), Query Frame = -3
Query:  372 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGS-FSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEE 818
            QI+VLGTG++ +E  L QL I  P +      ++  LA +I  G+D  L+PSRFEPCG+ QL AMRYG+VP+V   GGLVDTV       Q G+ F  D    +PVD    +  VR   A        E+ + GM Q+ SW   A  +E+
Sbjct:  304 QIVVLGTGERGLESGLWQLAIQNPGRFSVFLTYDDDLARLIYGGSDAFLMPSRFEPCGISQLLAMRYGSVPVVRKVGGLVDTVPSYDPIHQTGTGFCFD--RFEPVDF--YTALVRSWEAFRHRDCWRELQQRGMTQNYSWDRSALDYEQ 449          
BLAST of CV885190 vs. ExPASy Swiss-Prot
Match: GLGA_HAEIE (Glycogen synthase OS=Haemophilus influenzae (strain PittEE) GN=glgA PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.343e-19
Identity = 51/153 (33.33%), Postives = 89/153 (58.17%), Query Frame = -3
Query:  378 IKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMK-NGMAQDLSWKGPAKKW 833
            +K+  Q+++LG+G   +E+ + +L   YPE       ++  L+H+++AG D IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV +      + + +      +     A+   ++RA A +       M++ + M QD SW+  A+++
Sbjct:  318 VKQGGQLMILGSGAPHLEQGIRELAAQYPENIAVKIGYDEALSHLMVAGGDVILVPSRFEPCGLTQLYGLQYGTLPLVRKTGGLADTVVDS-ASESIKARTATGFVFENATPEALRHCLQRAFALWQKPRAWTMVRTDAMEQDFSWRKAAEQY 469          
BLAST of CV885190 vs. ExPASy Swiss-Prot
Match: GLGA_FRATN (Glycogen synthase OS=Francisella tularensis subsp. novicida (strain U112) GN=glgA PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.343e-19
Identity = 57/164 (34.76%), Postives = 86/164 (52.44%), Query Frame = -3
Query:  357 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG---------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQA-LAEMMKNGMAQDLSWKGPAKKWEETLLNL 818
            Q+++LG+G K +E+        YP+       ++   AH IIAG+D I++PSRFEPCGL QL+ + YGT+P+V   GGL DTV +           TGF    FSV+          +++  +RRA A Y  +    ++ K  M Q ++W   A+K  +   NL
Sbjct:  331 QVVLLGSGDKALEEVFLAAAKKYPKSIAVQIGYDEEQAHRIIAGSDVIMVPSRFEPCGLTQLYGLTYGTLPLVHKVGGLADTVTDSSLENLADGTATGFVFDEFSVE----------SLTLAIRRAFALYNRKTDWKKVRKTAMQQQVTWDSSAEKIYQIYKNL 484          
BLAST of CV885190 vs. ExPASy Swiss-Prot
Match: GLGA_BACHD (Glycogen synthase OS=Bacillus halodurans GN=glgA PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.343e-19
Identity = 64/169 (37.87%), Postives = 90/169 (53.25%), Query Frame = -3
Query:  345 ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE-------EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEETLLNLEVAG 827
            ENVQ+ +LGTG   +E QL  L  L+P +      F  PLA  + AGAD  ++PSRFEPCGL Q+ ++RY TVPIV  TGGL DT++       EG  GF    ++                T++RAL  Y T+   E ++ N  + ++ W   AK++  T L  E+ G
Sbjct:  315 ENVQLAILGTGDPSLEDQLHHLASLHPHQISFKCVFAEPLARKLYAGADLFIMPSRFEPCGLSQMISLRYETVPIVRETGGLYDTIQSYNEEIGEG-NGFSFTHYNAH----------DFLYTIKRALRFYRTEKEWENLLLNIYSSEVGWDVSAKQY--TALYEEILG 470          
BLAST of CV885190 vs. ExPASy Swiss-Prot
Match: GLGA_ACTP7 (Glycogen synthase OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=glgA PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.343e-19
Identity = 59/163 (36.20%), Postives = 85/163 (52.15%), Query Frame = -3
Query:  375 IKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV---------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKWE 833
            ++E VQ++VLG+G   +E  L +    +PE+      +N  L+H IIAG D IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV         +   TGF     S D                RRA+  +    L + + +N +AQD  W   A  ++
Sbjct:  319 MEERVQLVVLGSGSPHLEYLLNEARSRHPEQIGIYIGYNEALSHQIIAGGDVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVVDSNKESIEQRTATGFVFNYPSSD----------DFLEAFRRAVNLWKKNKLWSSVRQNALAQDFGWARAAASYQ 471          
BLAST of CV885190 vs. ExPASy Swiss-Prot
Match: GLGA_ACTP2 (Glycogen synthase OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=glgA PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.343e-19
Identity = 59/163 (36.20%), Postives = 85/163 (52.15%), Query Frame = -3
Query:  375 IKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV---------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKWE 833
            ++E VQ++VLG+G   +E  L +    +PE+      +N  L+H IIAG D IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV         +   TGF     S D                RRA+  +    L + + +N +AQD  W   A  ++
Sbjct:  319 MEERVQLVVLGSGSPHLEYLLNEARSRHPEQIGIYIGYNEALSHQIIAGGDVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVVDSNKESIEQRTATGFVFNYPSSD----------DFLEAFRRAVNLWKKNKLWSSVRQNALAQDFGWARAAASYQ 471          
BLAST of CV885190 vs. ExPASy Swiss-Prot
Match: GLGA1_GEOSL (Glycogen synthase 1 OS=Geobacter sulfurreducens GN=glgA1 PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.343e-19
Identity = 58/155 (37.42%), Postives = 88/155 (56.77%), Query Frame = -3
Query:  372 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV----EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEE 824
            +VQ+++LG G+         +   YPEK      +N  L+H I AG+DF ++PS FEPCGL Q++++RYGT+PIV +TGGL D+V    E+  TG     +S D +A+       V T  RR        A+A ++ N MA+  +W+  A ++EE
Sbjct:  332 DVQVVMLGAGEPWSHFYFGDVRNEYPEKFGLYIGYNNGLSHRIEAGSDFFVMPSAFEPCGLNQMYSLRYGTLPIVRATGGLDDSVENFDEQNLTGNGFKFWSHDADALFDTVGWTVHTWYRR------KDAMAALIGNAMAKRFTWEDSAARYEE 480          
BLAST of CV885190 vs. ExPASy Swiss-Prot
Match: GLGA_THIDA (Glycogen synthase OS=Thiobacillus denitrificans (strain ATCC 25259) GN=glgA PE=3 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.754e-19
Identity = 56/147 (38.10%), Postives = 83/147 (56.46%), Query Frame = -3
Query:  387 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPA 824
            + + ++LG+G+   E++L +L   +P +      ++  LAH I AGAD  L+PSRFEPCGL Q++++RYGT+PIV  TGGL DT+ +      +   S +    D  DVA     VRRALA Y   +L   + + GM     W+  A
Sbjct:  331 DARFVLLGSGQAAYEQRLTRLARQHPTRVFVEIGYDEALAHQIEAGADMFLMPSRFEPCGLNQMYSLRYGTLPIVFKTGGLADTIVD-TNEASLADGSANGFVFDTPDVAHFVDAVRRALALYRQPSLWRRVQQTGMRLSFDWRESA 476          
The following BLAST results are available for this feature:
BLAST of CV885190 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 360
Match NameE-valueIdentityDescription
GLGA1_ANASP7.875e-2037.97Glycogen synthase 1 OS=Anabaena sp. (strain PCC 71... [more]
GLGA_STRSV1.029e-1936.09Glycogen synthase OS=Streptococcus sanguinis (stra... [more]
GLGA_PROMM1.343e-1941.33Glycogen synthase OS=Prochlorococcus marinus (stra... [more]
GLGA_HAEIE1.343e-1933.33Glycogen synthase OS=Haemophilus influenzae (strai... [more]
GLGA_FRATN1.343e-1934.76Glycogen synthase OS=Francisella tularensis subsp.... [more]
GLGA_BACHD1.343e-1937.87Glycogen synthase OS=Bacillus halodurans GN=glgA P... [more]
GLGA_ACTP71.343e-1936.20Glycogen synthase OS=Actinobacillus pleuropneumoni... [more]
GLGA_ACTP21.343e-1936.20Glycogen synthase OS=Actinobacillus pleuropneumoni... [more]
GLGA1_GEOSL1.343e-1937.42Glycogen synthase 1 OS=Geobacter sulfurreducens GN... [more]
GLGA_THIDA1.754e-1938.10Glycogen synthase OS=Thiobacillus denitrificans (s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_013B10_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_013_T7_B10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885190 ID=CV885190; Name=CV885190; organism=Citrus sinensis; type=EST; length=844bp
TTTTTTTTTTTTGATCTATAAACTTGTTCAGTTGAACTTTTTCATTTCAG
GAGAGTGGCGACAGCCCTCAGAGCCCTTTTACAAAACTGTAAAACAGAAC
TTAATATTTCATTATACAAGGTAAACACTAATGTCTCAACTCCAAACCAT
TATTGAAAATAGCGCATGCTGCATATACTGCCAACCTATGTTATTTCCTA
AGTAATATCTTGGGTTGTGGAGAATTACAGGAACATGTTTGCGGTCCAAA
ATAAAAGTGGAGATTTTTGTAGCCTCGATCAAGGAGTGGCCACATTTTCC
TTGGCAAGAGGAGCAATTTCTTCGCCGTCAATTCCAGGTTCACTACCAGC
AACTTCCAGGTTAAGTAGGGTCTCCTCCCATTTCTTAGCTGGTCCTTTCC
ATGAAAGATCTTGAGCCATGCCATTTTTCATCATTTCAGCCAAAGCTTGA
GTACCATAGGTTGCAAGAGCTCTTCTGACGGTTGTGGACACTGCAGCCAC
ATCTACTGGATCCACAGCCTCACAGTCAACACTGAAGCTTCCCATCTGGA
ATCCTGTAAAGCCTTCTTCCACAGTGTCAACCAAACCACCAGTGGAAGCC
ACGATAGGTACGGTTCCATAACGCATGGCATGTAATTGAATGAGACCACA
AGGTTCAAATCTGCTTGGAATCAAAATAAAATCAGCTCCTGCTATTATCA
TATGCGCCAGAGGAATATTGAATTTCGCTACTCCTCTGGCTTTCTCAGGG
TACAGTATCTCCAACTGTTCAAGCTGCTTCTCCATTGGTTTTTTGCCCGT
ACCAAGGACTATTATCTGAACATTCTCTTTGATGAAATGGGGAA
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