CV885190
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV885190 vs. ExPASy Swiss-Prot
Match: GLGA_RHOS5 (Glycogen synthase OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=glgA PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.754e-19 Identity = 53/156 (33.97%), Postives = 82/156 (52.56%), Query Frame = -3 Query: 387 PHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCE---AVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPA 842 P FI + VLGTG +E + +LE+ + + ++ L+H++ AG D +L+PSRFEPCGL Q++ +RYG +P+VA TGGL DT+ + + C P + A + +RR + Y AL E + KN M + W+ A Sbjct: 315 PDFIAAGGGLAVLGTGDAALEGAMRELEVRFSGRVGVRIGYDEGLSHLMFAGGDAVLVPSRFEPCGLTQMYGLRYGAIPVVALTGGLADTI----INANPAALTAGCATGLTFHPTEPPAFAEALRRLIHLYADHALWEKVQKNAMRHPVGWQTSA 466
BLAST of CV885190 vs. ExPASy Swiss-Prot
Match: GLGA_PROM9 (Glycogen synthase OS=Prochlorococcus marinus (strain MIT 9312) GN=glgA PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.754e-19 Identity = 68/186 (36.56%), Postives = 96/186 (51.61%), Query Frame = -3 Query: 282 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAG-SEPGIDGEEIAPLAKENVATP 818 QI VLGTG + +E L QL + YP + ++ L+ +I G+D L+PSRFEPCG+ QL AMRYG+VPIV GGLVDTV TGF F +P+D ++ VR A + + K M+Q+ SW+ A ++E ++ +V G EP D E+ + A P Sbjct: 304 QIAVLGTGDRYLESGLWQLALDYPGRFSVFLTYDDSLSRLIYGGSDAFLMPSRFEPCGISQLLAMRYGSVPIVRRVGGLVDTVLPHDPENNSGTGFCFDRF-------EPIDF--YTSLVRSWEAFRHKDSWELLQKRAMSQEFSWQRSALEYE--MMYKDVCGIKEPSPDVAEVEKFSYGQSADP 478
BLAST of CV885190 vs. ExPASy Swiss-Prot
Match: GLGA_LACS1 (Glycogen synthase OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=glgA PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.754e-19 Identity = 60/162 (37.04%), Postives = 87/162 (53.70%), Query Frame = -3 Query: 378 HFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE-------EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG-TQALAEMMKNGMAQDLSWKGPAKKW 839 + ++ +VQ+IVLGTG E YP+K F++ LA I AGAD L+PS FEPCGL Q+ +MRYGT+PIV GGL D+V+ EG TGF FS + ++ AL Y + A +++K M+QD SW+ ++++ Sbjct: 318 NLVQFDVQVIVLGTGDANFEHDFRYFADTYPDKVGAAITFDVGLAQRIYAGADMFLMPSAFEPCGLSQMISMRYGTLPIVHQIGGLQDSVQPFNPVTGEG-TGFGFHDFS----------GFYMMQEIQEALRLYAESVAWTKVVKQAMSQDFSWETASQEY 468
BLAST of CV885190 vs. ExPASy Swiss-Prot
Match: GLGA_DESHD (Glycogen synthase OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=glgA PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.754e-19 Identity = 56/160 (35.00%), Postives = 88/160 (55.00%), Query Frame = -3 Query: 357 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE--EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQ--ALAEMMKNGMAQDLSWKGPAKKWEETLLNL 824 +++++VLGTG E++L++ YP K R + + LAH I AGAD L+PSRFEPCG+ Q+ AM YGT+PIV TGGL DTV +G G D A + + +++A+ + Q ++ +N ++ D SW A ++ + +L Sbjct: 310 DIRLVVLGTGDAHYEERLQRFAEGYPGKLRVILGYQEELAHRIYAGADIFLMPSRFEPCGIAQMIAMSYGTIPIVRETGGLKDTVRPYSPISGEGNGFTFTDYNAHE------LLYAIQKAVEMFRNQKDTWQKLQENALSSDFSWNRSAARYRDVYESL 463
BLAST of CV885190 vs. ExPASy Swiss-Prot
Match: GLGA_CHLP8 (Glycogen synthase OS=Chlorobaculum parvum (strain NCIB 8327) GN=glgA PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.754e-19 Identity = 55/156 (35.26%), Postives = 87/156 (55.77%), Query Frame = -3 Query: 372 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE----GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY-GTQALAEMMKNGMAQDLSWKGPAKKWEE 824 ++Q+IV G+G K E++L L +PEK F H +IAG D +++PSR E CG+ Q+ AM YGTVPI + GG+V+T+EE TGF ++ + A++ + AL+ + + AE+M+ GM +D SW A+++ E Sbjct: 336 DLQLIVSGSGNKEFEQELRDLVEEHPEKLAVNTDFTDAFYHQMIAGLDMLIMPSRIESCGMKQMFAMNYGTVPIAYAGGGIVETIEEVSGDKGTGFVFTDYTAE----------ALTAKLGEALSMFDDKERWAELMREGMERDFSWSASAEQYAE 481
BLAST of CV885190 vs. ExPASy Swiss-Prot
Match: GLGA1_RHIRD (Glycogen synthase 1 OS=Rhizobium radiobacter GN=glgA1 PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.754e-19 Identity = 55/145 (37.93%), Postives = 80/145 (55.17%), Query Frame = -3 Query: 387 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPA 818 +++VLG G +E L + + +N PL+H++ AG D I+IPSRFEPCGL QL+A+RYG +P+VA TGGL DTV + + S + PV + + +RR + Y L +M K GM D+SW+ A Sbjct: 322 RLVVLGAGDVALEGALLAAASRHHGRVGVAIGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDA-NHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKLGMKSDVSWEKSA 465
BLAST of CV885190 vs. ExPASy Swiss-Prot
Match: GLGA1_AGRT5 (Glycogen synthase 1 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=glgA1 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.754e-19 Identity = 55/145 (37.93%), Postives = 80/145 (55.17%), Query Frame = -3 Query: 387 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPA 818 +++VLG G +E L + + +N PL+H++ AG D I+IPSRFEPCGL QL+A+RYG +P+VA TGGL DTV + + S + PV + + +RR + Y L +M K GM D+SW+ A Sbjct: 322 RLVVLGAGDVALEGALLAAASRHHGRVGVAIGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDA-NHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKLGMKSDVSWEKSA 465
BLAST of CV885190 vs. ExPASy Swiss-Prot
Match: GLGA_PROM0 (Glycogen synthase OS=Prochlorococcus marinus (strain MIT 9301) GN=glgA PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.291e-19 Identity = 67/186 (36.02%), Postives = 96/186 (51.61%), Query Frame = -3 Query: 282 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAG-SEPGIDGEEIAPLAKENVATP 818 QI VLGTG + +E L QL + YP + ++ L+ +I G+D L+PSRFEPCG+ QL AMRYG++PIV GGLVDTV TGF F +P+D ++ VR A + + K M+Q+ SW+ A ++E ++ +V G EP D E+ + A P Sbjct: 304 QIAVLGTGDRYLESGLWQLALDYPGRFSVFLTYDDSLSRLIYGGSDAFLMPSRFEPCGISQLLAMRYGSIPIVRRVGGLVDTVLPHDPENNSGTGFCFDRF-------EPIDF--YTSLVRSWEAFRHKDSWKLLQKRAMSQEFSWQRSALEYE--IMYKDVCGIKEPSPDVAEVEKFSYGQSADP 478
BLAST of CV885190 vs. ExPASy Swiss-Prot
Match: GLGA_OCEIH (Glycogen synthase OS=Oceanobacillus iheyensis GN=glgA PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.291e-19 Identity = 58/165 (35.15%), Postives = 88/165 (53.33%), Query Frame = -3 Query: 348 FIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV--EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVA 836 F++E++Q+IVLG G++ E + +E YP+K FN LA + A ADF+L+PS+FEPCGL QL A++Y TVPIV TGGL DT+ TG G + A + + V S + + + + ++KN SWK A + + L+ + Sbjct: 313 FLQEDIQLIVLGNGEQEFEYYFKDIEYRYPDKMITHLHFNESLARRLYASADFLLMPSKFEPCGLSQLIALQYKTVPIVRETGGLKDTIIAFNEITGEGNGFRFANYNAHELLHVLKYSLEIYQQPSLWSV-----LIKNVNKSKFSWKDSASAYADVYQQLDAS 472
BLAST of CV885190 vs. ExPASy Swiss-Prot
Match: GLGA_LEPCP (Glycogen synthase OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=glgA PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.291e-19 Identity = 57/164 (34.76%), Postives = 84/164 (51.22%), Query Frame = -3 Query: 378 PHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV--------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQA-LAEMMKNGMAQDLSWKGPAKKW 842 P I+ Q +LG+G ME + +L +P A ++ AH +IAG+D IL+PSRFEPCGL QL+ ++YGT+P+V GGLVDTV + TGF FS D + RA A + +A ++ + GM Q W+ A+++ Sbjct: 325 PALIERGFQFALLGSGDAGMENEFRRLAEQHPTAAAVRLGYDEAFAHRLIAGSDLILVPSRFEPCGLTQLYGLKYGTLPVVRRVGGLVDTVADARLETLDHDATGFVFDDFSAD----------GLIGACLRAKALFRRRADWLQVQRRGMQQPFGWEDSARQY 478 The following BLAST results are available for this feature:
BLAST of CV885190 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 360
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Sequences
The
following sequences are available for this feature:
EST sequence >CV885190 ID=CV885190; Name=CV885190; organism=Citrus sinensis; type=EST; length=844bpback to top |