CV885190
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV885190 vs. ExPASy Swiss-Prot
Match: SSY21_ORYSJ (Soluble starch synthase 2-1, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=SSII-1 PE=2 SV=2) HSP 1 Score: 118.627 bits (296), Expect = 4.311e-26 Identity = 70/162 (43.21%), Postives = 94/162 (58.02%), Query Frame = -3 Query: 363 PHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE--EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLL 842 P ++VQ+I+LGTG++ +E L +LE + ++ RG F+I LAH + AGAD +L+PSRFEPCGL QL+AM YGTVP+V + GGL DTVE + +G EA +D R T + + K GM QDLSW AK +EE LL Sbjct: 586 PWIAGQDVQLIMLGTGRQDLEDTLRRLESQHYDRVRGWVGFSIRLAHRMTAGADILLMPSRFEPCGLNQLYAMMYGTVPVVHAVGGLRDTVEHYNPYEESGLGWTFEKAEANRLIDALGHCLNTYRNYRT----SWEGLQKRGMMQDLSWDNAAKLYEEVLL 743
BLAST of CV885190 vs. ExPASy Swiss-Prot
Match: SSY1_WHEAT (Starch synthase 1, chloroplastic/amyloplastic OS=Triticum aestivum GN=WSSI-2 PE=2 SV=2) HSP 1 Score: 117.472 bits (293), Expect = 9.605e-26 Identity = 64/159 (40.25%), Postives = 95/159 (59.75%), Query Frame = -3 Query: 372 PHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQ--ALAEMMKNGMAQDLSWKGPAKKWEE 842 P ++E+VQ ++LG+G E + E Y +K RG F++P++H I AG D +L+PSRFEPCGL QL+AM+YGTVP+V TGGL DTVE F F A P+ V + +R A++T+ + +MK GM +D +W A+++E+ Sbjct: 477 PELMREDVQFVMLGSGDPIFEGWMRSTESSYKDKFRGWVGFSVPVSHRITAGCDILLMPSRFEPCGLNQLYAMQYGTVPVVHGTGGLRDTVET-FNPFGAKGEEGTGWAFSPLTVDKMLWALRTAMSTFREHKPSWEGLMKRGMTKDHTWDHAAEQYEQ 634
BLAST of CV885190 vs. ExPASy Swiss-Prot
Match: GLGA_MYXXD (Glycogen synthase OS=Myxococcus xanthus (strain DK 1622) GN=glgA PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.795e-25 Identity = 61/157 (38.85%), Postives = 97/157 (61.78%), Query Frame = -3 Query: 375 PHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQA-LAEMMKNGMAQDLSWKGPAKKWE 842 P + +++++ +G+G+ P+E+ L L+ YP++ F+ L+H++ AGADF L+PSR+EPCGL Q++++RYGTVPIV +TGGLVDTVE G G + + +A+ +RRALA Y + L E + GM +D SW +++E Sbjct: 320 PAALHADIRVVGVGSGEGPLEEGLLALQSRYPKQVGVHIGFDPGLSHLVEAGADFFLMPSRYEPCGLNQMYSLRYGTVPIVRATGGLVDTVEGGLDGNGI--------LFEAFHKSALLAAIRRALALYADPSRLDEFRRRGMEKDFSWGASGRRYE 468
BLAST of CV885190 vs. ExPASy Swiss-Prot
Match: SSY2_SOLTU (Granule-bound starch synthase 2, chloroplastic/amyloplastic OS=Solanum tuberosum GN=SS2 PE=1 SV=3) HSP 1 Score: 114.39 bits (285), Expect = 8.131e-25 Identity = 64/174 (36.78%), Postives = 95/174 (54.60%), Query Frame = -3 Query: 363 PHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE--------------MMKNGMAQDLSWKGPAKKWEETLL 842 P + ++VQ+++LGTG++ +E+ L Q E + +K RG F++ +H I AGAD +L+PSRFEPCGL QL+AM+YGT+P+V + GGL DTV + DP + + + T RA A+ AL + M QDLSW A+ +EE L+ Sbjct: 604 PWMMGQDVQLVMLGTGRRDLEQMLRQFECQHNDKIRGWVGFSVKTSHRITAGADILLMPSRFEPCGLNQLYAMKYGTIPVVHAVGGLRDTV----------------QPFDPFNESGLGWTFSRAEASQLIHALGNCLLTYREYKKSWEGIQTRCMTQDLSWDNAAQNYEEVLI 761
BLAST of CV885190 vs. ExPASy Swiss-Prot
Match: SSY22_ORYSJ (Soluble starch synthase 2-2, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=SSII-2 PE=2 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 8.131e-25 Identity = 67/164 (40.85%), Postives = 96/164 (58.54%), Query Frame = -3 Query: 363 PHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE--EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGT--QALAEMMKNGMAQDLSWKGPAKKWEETLL 842 P ++VQ+++LGTG+ +E+ L + E + +K RG F++ LAH I AGAD +L+PSRFEPCGL QL+AM YGTVP+V + GGL DTV + F +G EA +D + L TY ++ + GMAQDLSW A+ +E+ L+ Sbjct: 531 PWIAGQDVQVVMLGTGRPDLEEMLRRFESEHNDKVRGWVGFSVQLAHRITAGADVLLMPSRFEPCGLNQLYAMAYGTVPVVHAVGGLRDTVAPFDPFADTGLGWTFDRAEANRMID------ALGHCLNTYRNYKESWRGLQARGMAQDLSWDHAAELYEDVLV 688
BLAST of CV885190 vs. ExPASy Swiss-Prot
Match: SSG2_PEA (Granule-bound starch synthase 2, chloroplastic/amyloplastic OS=Pisum sativum PE=1 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 8.131e-25 Identity = 62/162 (38.27%), Postives = 95/162 (58.64%), Query Frame = -3 Query: 363 PHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG--TQALAEMMKNGMAQDLSWKGPAKKWEETLL 842 P + +VQ+++LGTG+ +E+ L++ E + +K R F++ +AH I AG+D +L+PSRFEPCGL QL+AM YGTVP+V GGL DTV+ F F D + + + L TY ++ + + GM+QDLSW A+++EE L+ Sbjct: 589 PWMMSHDVQLVMLGTGRADLEQMLKEFEAQHCDKIRSWVGFSVKMAHRITAGSDILLMPSRFEPCGLNQLYAMSYGTVPVVHGVGGLRDTVQP-FNPFDESGVG---WTFDRAEANKLMAALWNCLLTYKDYKKSWEGIQERGMSQDLSWDNAAQQYEEVLV 746
BLAST of CV885190 vs. ExPASy Swiss-Prot
Match: GLGA1_METCA (Glycogen synthase 1 OS=Methylococcus capsulatus GN=glgA1 PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.387e-24 Identity = 64/149 (42.95%), Postives = 88/149 (59.06%), Query Frame = -3 Query: 378 VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY-GTQALAEMMKNGMAQDLSWKGPAKKW 821 VQ++VLG+G K E+ E+ PE+ ++ PLAH+I AGAD L+PSRFEPCGL QL++ RYGTVPIV GGL DTVE+ T ++ + +P A + V RALA Y + + K GMA+D SW+ A ++ Sbjct: 322 VQLVVLGSGDKEFERCFERAAAARPERIAVTIGYDEPLAHLIEAGADIFLMPSRFEPCGLNQLYSQRYGTVPIVRKVGGLADTVEDA-TPERLAAGQASGIVFEPAKPAFLLEAVYRALALYREPEVWRAVCKCGMAKDFSWRKSASRY 469
BLAST of CV885190 vs. ExPASy Swiss-Prot
Match: SSY23_ORYSI (Soluble starch synthase 2-3, chloroplastic/amyloplastic OS=Oryza sativa subsp. indica GN=SSII-3 PE=1 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 5.270e-24 Identity = 62/162 (38.27%), Postives = 95/162 (58.64%), Query Frame = -3 Query: 363 PHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG--TQALAEMMKNGMAQDLSWKGPAKKWEETLL 842 P ++VQ+++LG+G++ +E L++ E + K RG F++ +AH I AGAD +++PSRFEPCGL QL+AM YGTVP+V + GGL DTV F F+ + +P + + L TY ++ + GM+QDLSW A+ +EE L+ Sbjct: 647 PWIAGQDVQLVLLGSGRRDLEVMLQRFEAQHNSKVRGWVGFSVKMAHRITAGADVLVMPSRFEPCGLNQLYAMAYGTVPVVHAVGGLRDTV-SAFDPFEDTGLGWTFDRAEP---HKLIEALGHCLETYRKYKESWRGLQVRGMSQDLSWDHAAELYEEVLV 804
BLAST of CV885190 vs. ExPASy Swiss-Prot
Match: SSY23_ORYSJ (Soluble starch synthase 2-3, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=SSII-3 PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.174e-23 Identity = 61/162 (37.65%), Postives = 95/162 (58.64%), Query Frame = -3 Query: 363 PHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG--TQALAEMMKNGMAQDLSWKGPAKKWEETLL 842 P ++VQ+++LG+G++ +E L++ E + K RG F++ +AH I AGAD +++PSRFEPCGL QL+AM YGTVP+V + GGL DT+ F F+ + +P + + L TY ++ + GM+QDLSW A+ +EE L+ Sbjct: 647 PWIAGQDVQLVLLGSGRRDLEVMLQRFEAQHNSKVRGWVGFSVKMAHRITAGADVLVMPSRFEPCGLNQLYAMAYGTVPVVHAVGGLRDTM-SAFDPFEDTGLGWTFDRAEP---HKLIEALGHCLETYRKYKESWRGLQVRGMSQDLSWDHAAELYEEVLV 804
BLAST of CV885190 vs. ExPASy Swiss-Prot
Match: GLGA_ANOFW (Glycogen synthase OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=glgA PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.174e-23 Identity = 71/172 (41.28%), Postives = 101/172 (58.72%), Query Frame = -3 Query: 342 IKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE-------EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEETLLNLEVAGS 833 I E+VQ+I+LGTG+ E+ + + + YP++ R F+ LAH I AGAD L+PS+FEPCGL Q+ AMRYG VPIV TGGL DTV+ EG TGF +F+ + T++RA + Y + + E +MK M++D SW A K+ + L + +AGS Sbjct: 319 IAEHVQMIILGTGEWEFEQFFQDMTMTYPDRVRVYIGFSEQLAHQIYAGADMFLMPSKFEPCGLGQMIAMRYGAVPIVRETGGLNDTVQSFNELTKEG-TGFTFKNFNAH----------DMLYTIQRARSFYEQKEIWETIMKQAMSRDYSWAKSAFKYNQ-LYDELMAGS 478 The following BLAST results are available for this feature:
BLAST of CV885190 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 360
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Sequences
The
following sequences are available for this feature:
EST sequence >CV885190 ID=CV885190; Name=CV885190; organism=Citrus sinensis; type=EST; length=844bpback to top |