CV885189

Overview
NameCV885189
Unique NameCV885189
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length752
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3395 contig Csv1_Contig3395:1..751. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV885189 vs. ExPASy Swiss-Prot
Match: RL7_CHICK (60S ribosomal protein L7 OS=Gallus gallus GN=RPL7 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.714e-39
Identity = 89/220 (40.45%), Postives = 142/220 (64.55%), Query Frame = 2
Query:   95 MAEEAAQQPLAFVAETVLKKRKSTEALALTRKAQLELGKYGHGQKNKKSKVEDI-KRPEQFIKQYRDQELDLIRMKQRGKRSKKVIGKPKSKLLFIIRIQGTSDMHPKTKKILYNLRLRRIFSGVFVRANDGMLEVLQKVEPYVTYGYPNLANVKELIYKKGYATVDRQRIPLTDNNIIEQTLGKYGIICIEDIVHEIANVCPHFKEVINFLGPLTLNKP 751
            MA++ A++ +  V E++LK+R++  A    R  +L   K     K +K++ + I +R + + K+YR      IRM +  +++       + KL F+IRI+G + + PK +K+L  LRLR+IF+G FV+ N   + +L+ VEPY+ +GYPNL +V +LIYK+GY  ++++RI LTDN++I + LGK GIIC+ED++HEI  V  +FK V NFL P  L+ P
Sbjct:    1 MADKEAKK-VPSVPESLLKRRQAYAAAKAKRLKRLLAQK-----KFRKAQRKIIYERAKAYHKEYRHMYRQEIRMARMARKAGNYYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAWGYPNLKSVHDLIYKRGYGKINKKRIALTDNSLIRKRLGKLGIICMEDVIHEIYTVGKNFKVVNNFLWPFKLSSP 214          
BLAST of CV885189 vs. ExPASy Swiss-Prot
Match: RL7_DEBHA (60S ribosomal protein L7 OS=Debaryomyces hansenii GN=RPL7 PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.081e-38
Identity = 83/205 (40.49%), Postives = 126/205 (61.46%), Query Frame = 2
Query:  137 ETVLKKRKSTEALALTRKAQLELGKYGHGQKNKKSKVEDIKRPEQFIKQYRDQELDLIRMKQRGKRSKKVIGKPKSKLLFIIRIQGTSDMHPKTKKILYNLRLRRIFSGVFVRANDGMLEVLQKVEPYVTYGYPNLANVKELIYKKGYATVDRQRIPLTDNNIIEQTLGKYGIICIEDIVHEIANVCPHFKEVINFLGPLTLNKP 751
            ET++KK K+ +  A  R A     K      N++ +     R   + K+Y D E  +I+ K+  K +       + KL+F++RI+G + + PK +K+L  LRL +I +GVFVR      E+L+  EPY+ YGYPNL+ ++ L+YK+G+  +++QRI L+DN IIE  LGKYGI+ IED++HEI  V P+FK+  NFL P  L+ P
Sbjct:    8 ETLVKKSKAQQKTAEERAA----AKVVRQASNQEKRKIIFDRAAAYQKEYTDAERAVIKAKRDAKAAGSYYVDAQPKLVFVVRIKGINKIAPKPRKVLQLLRLTQINAGVFVRLTKATSELLKLAEPYIAYGYPNLSTIRHLVYKRGHGKINKQRIALSDNAIIEANLGKYGILSIEDLIHEIYTVGPNFKQANNFLWPFKLSNP 208          
BLAST of CV885189 vs. ExPASy Swiss-Prot
Match: RL7L_PONAB (60S ribosomal protein L7-like 1 OS=Pongo abelii GN=RPL7L1 PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.407e-38
Identity = 86/214 (40.19%), Postives = 133/214 (62.15%), Query Frame = 2
Query:  104 EAAQQPLAFVAETVLKKRKSTEALALTRKAQLELGKYGHGQKNKKSKVEDIKRPEQFIKQYRDQELDLIRMKQRGKRSKKVIGKPKSKLLFIIRIQGTSDMHPKTKKILYNLRLRRIFSGVFVRANDGMLEVLQKVEPYVTYGYPNLANVKELIYKKGYATVDRQRIPLTDNNIIEQTLGKYGIICIEDIVHEIANVCPHFKEVINFLGPLTLN 745
            E  Q+ +  V E +LKKRK+ +AL  T+  Q  L K    ++ +K K    KR E F+     Q+ D++R+++   +   +    K  L F++RI+    +    ++ +  LRL++IFSGVFV+     L++L+ VEPYVT+G+PNL +V+ELI K+G A V  + IPLTDN +IE+ LGK+G+IC+ED++HEIA    HF+E+  FL P  L+
Sbjct:    3 EQEQRKIPLVPENLLKKRKAYQALKATQAEQALLAK----KEQRKGKGLRFKRLESFLHDSWRQKRDMVRLRRLEMKPHALELPDKHSLAFVVRIERIDGVSLLVQRTIARLRLKKIFSGVFVKVTPQNLKMLRIVEPYVTWGFPNLKSVRELILKRGQAKVKNKTIPLTDNTVIEEHLGKFGVICLEDLIHEIAFPGKHFQEISWFLRPFHLS 212          
BLAST of CV885189 vs. ExPASy Swiss-Prot
Match: RL7L_MOUSE (60S ribosomal protein L7-like 1 OS=Mus musculus GN=Rpl7l1 PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.407e-38
Identity = 83/217 (38.25%), Postives = 134/217 (61.75%), Query Frame = 2
Query:   95 MAEEAAQQPLAFVAETVLKKRKSTEALALTRKAQLELGKYGHGQKNKKSKVEDIKRPEQFIKQYRDQELDLIRMKQRGKRSKKVIGKPKSKLLFIIRIQGTSDMHPKTKKILYNLRLRRIFSGVFVRANDGMLEVLQKVEPYVTYGYPNLANVKELIYKKGYATVDRQRIPLTDNNIIEQTLGKYGIICIEDIVHEIANVCPHFKEVINFLGPLTLN 745
            MAEE  ++ +  V E +LKKRK+ +AL  T+  Q  L K     + +K K    +R E F+     Q+ D +R+++   + + +    K  L F+IR++    +    K  +  L L+++FSGVFV+     + +L+ VEPYVT+G+PNL +V+ELI K+G A ++ + +PLTDN +IE+ LG++G+IC+ED++HEIA    HF+EV +FL P  L+
Sbjct:    1 MAEEGERKKIPLVPENLLKKRKAYQALKATQAKQALLAK-----RERKGKQFRFRRLESFVHDSWRQQRDKVRVQRLEVKPRALEVPDKHPLAFVIRMERIEGVSLLVKSTIMKLGLKKLFSGVFVKVTPQSVRMLRTVEPYVTWGFPNLKSVRELILKRGQAKINNKTVPLTDNTVIEEHLGRFGVICLEDLIHEIAFPGKHFQEVSSFLCPFLLS 212          
BLAST of CV885189 vs. ExPASy Swiss-Prot
Match: RL7L_HUMAN (60S ribosomal protein L7-like 1 OS=Homo sapiens GN=RPL7L1 PE=1 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 5.363e-38
Identity = 87/214 (40.65%), Postives = 132/214 (61.68%), Query Frame = 2
Query:  104 EAAQQPLAFVAETVLKKRKSTEALALTRKAQLELGKYGHGQKNKKSKVEDIKRPEQFIKQYRDQELDLIRMKQRGKRSKKVIGKPKSKLLFIIRIQGTSDMHPKTKKILYNLRLRRIFSGVFVRANDGMLEVLQKVEPYVTYGYPNLANVKELIYKKGYATVDRQRIPLTDNNIIEQTLGKYGIICIEDIVHEIANVCPHFKEVINFLGPLTLN 745
            E  Q+ +  V E +LKKRK+ +AL  T+  Q  L K    ++ KK K    KR E F+     Q+ D +R+++   +   +    K  L F++RI+    +    ++ +  LRL++IFSGVFV+     L++L+ VEPYVT+G+PNL +V+ELI K+G A V  + IPLTDN +IE+ LGK+G+IC+ED++HEIA    HF+E+  FL P  L+
Sbjct:    3 EQEQRKIPLVPENLLKKRKAYQALKATQAKQALLAK----KEQKKGKGLRFKRLESFLHDSWRQKRDKVRLRRLEVKPHALELPDKHSLAFVVRIERIDGVSLLVQRTIARLRLKKIFSGVFVKVTPQNLKMLRIVEPYVTWGFPNLKSVRELILKRGQAKVKNKTIPLTDNTVIEEHLGKFGVICLEDLIHEIAFPGKHFQEISWFLCPFHLS 212          
BLAST of CV885189 vs. ExPASy Swiss-Prot
Match: RL7_CANGA (60S ribosomal protein L7 OS=Candida glabrata GN=RPL7 PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.540e-37
Identity = 79/208 (37.98%), Postives = 124/208 (59.62%), Query Frame = 2
Query:  134 AETVLKKRKSTEALALTRKAQLELGKYGHGQK--NKKSKVEDIKRPEQFIKQYRDQELDLIRMKQRGKRSKKVIGKPKSKLLFIIRIQGTSDMHPKTKKILYNLRLRRIFSGVFVRANDGMLEVLQKVEPYVTYGYPNLANVKELIYKKGYATVDRQRIPLTDNNIIEQTLGKYGIICIEDIVHEIANVCPHFKEVINFLGPLTLNKP 751
            AE +LK     +      K   E  K    ++  NK+ +   ++R     K+Y   E  +I  K+  K S     + + KL+F++RI+G + + PK +K+L  LRL +I SG FV+      E+L+ +EPYV YGYP+ + V++L+YK+G+  +++QRI L+DN I+E  LGK+GI+ I+D++HEI  V PHFK+  NFL P  L+ P
Sbjct:    3 AEKILKPESQLKKAKYDEKKSEEFLKARAARRVANKQKRAAILERNAAHQKEYEAAERAVIDAKREAKASGSYYVEAQPKLVFVVRIKGINKIPPKPRKVLQLLRLTQINSGTFVKVTKATSELLKLIEPYVAYGYPSYSTVRQLVYKRGHGKINKQRIALSDNAIVEANLGKFGILSIDDLIHEIVTVGPHFKQANNFLWPFKLSNP 210          
BLAST of CV885189 vs. ExPASy Swiss-Prot
Match: RL7L_PIG (60S ribosomal protein L7-like 1 OS=Sus scrofa GN=RPL7L1 PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.540e-37
Identity = 85/217 (39.17%), Postives = 133/217 (61.29%), Query Frame = 2
Query:   95 MAEEAAQQPLAFVAETVLKKRKSTEALALTRKAQLELGKYGHGQKNKKSKVEDIKRPEQFIKQYRDQELDLIRMKQRGKRSKKVIGKPKSKLLFIIRIQGTSDMHPKTKKILYNLRLRRIFSGVFVRANDGMLEVLQKVEPYVTYGYPNLANVKELIYKKGYATVDRQRIPLTDNNIIEQTLGKYGIICIEDIVHEIANVCPHFKEVINFLGPLTLN 745
            MAEE  ++ +  V E +LKKRK+ +AL  T+  Q  L K    ++ +K K    KR E F+     Q  D +R+++   +   +    K  L F++RI+  S +    ++ +  LRL++IFSGVF++     ++ L+ VEPYVT+G+PNL +V+ELI K+G A V  + IPLTDN +IE+ LGK+G+IC+ED++HEIA    +F+ +  FL P  L+
Sbjct:    1 MAEEEQRKKIPLVPENLLKKRKAYQALKATQAKQALLQK----KEQRKGKELKFKRLEWFLHDSWRQLRDRVRLRRLEVKPHGLEVPDKHSLAFVVRIERISGVSSVVQRTIARLRLKKIFSGVFMQVTPQTIKTLRIVEPYVTWGFPNLKSVRELILKRGQAKVKNKIIPLTDNTVIEEHLGKFGVICLEDLIHEIAFPGKNFQAISGFLRPFQLS 213          
BLAST of CV885189 vs. ExPASy Swiss-Prot
Match: RL72_PARTE (60S ribosomal protein L7 2 OS=Paramecium tetraurelia GN=Rpl7-2 PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.556e-36
Identity = 78/207 (37.68%), Postives = 124/207 (59.90%), Query Frame = 2
Query:  131 VAETVLKKRKSTEALALTRKAQLELGKYGHGQKNKKSKVEDIKRPEQFIKQYRDQELDLIRMKQRGKRSKKVIGKPKSKLLFIIRIQGTSDMHPKTKKILYNLRLRRIFSGVFVRANDGMLEVLQKVEPYVTYGYPNLANVKELIYKKGYATVDRQRIPLTDNNIIEQTLGKYGIICIEDIVHEIANVCPHFKEVINFLGPLTLNKP 751
            VA+   +  K  +A+A  R  +L          NK  + +  K  + +  +Y+  +  L+   ++ K         ++KL+ ++RI+G + ++P+ ++ L  L+LR++ +  FVR N   +E+++KVEPYVTYGYP+ A +K LIYK+GYA ++ QRIP+T+NN+IEQ LGK GI  +ED++HEI  V PHFKE   FL    L  P
Sbjct:   18 VAKKTQRDSKLRDAVAKRRTERLAA--------NKTRRAQWEKTAQAYEAEYKAADKSLVDNLRKAKTEGGFYVPAEAKLILVVRIRGINTLNPQVRQTLRLLKLRQLHNAAFVRVNKATIEMIRKVEPYVTYGYPSRAVIKNLIYKRGYAKINGQRIPITNNNVIEQQLGKVGIHSVEDLIHEITTVGPHFKEANRFLWAFKLRGP 216          
BLAST of CV885189 vs. ExPASy Swiss-Prot
Match: RL71_PARTE (60S ribosomal protein L7 1 OS=Paramecium tetraurelia GN=Rpl7-1 PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.556e-36
Identity = 78/207 (37.68%), Postives = 124/207 (59.90%), Query Frame = 2
Query:  131 VAETVLKKRKSTEALALTRKAQLELGKYGHGQKNKKSKVEDIKRPEQFIKQYRDQELDLIRMKQRGKRSKKVIGKPKSKLLFIIRIQGTSDMHPKTKKILYNLRLRRIFSGVFVRANDGMLEVLQKVEPYVTYGYPNLANVKELIYKKGYATVDRQRIPLTDNNIIEQTLGKYGIICIEDIVHEIANVCPHFKEVINFLGPLTLNKP 751
            VA+   +  K  +A+A  R  +L          NK  + +  K  + +  +Y+  +  L+   ++ K         ++KL+ ++RI+G + ++P+ ++ L  L+LR++ +  FVR N   +E+++KVEPYVTYGYP+ A +K LIYK+GYA ++ QRIP+T+NN+IEQ LGK GI  +ED++HEI  V PHFKE   FL    L  P
Sbjct:   18 VAKKTQRDSKLRDAVAKRRTERLAA--------NKTRRAQWEKTAQAYEAEYKAADKSLVDNLRKAKTEGGFYVPAEAKLILVVRIRGINTLNPQVRQTLRLLKLRQLHNAAFVRVNKATIEMIRKVEPYVTYGYPSRAVIKNLIYKRGYAKINGQRIPITNNNVIEQQLGKVGIHSVEDLIHEITTVGPHFKEANRFLWAFKLRGP 216          
BLAST of CV885189 vs. ExPASy Swiss-Prot
Match: RL7_DROME (60S ribosomal protein L7 OS=Drosophila melanogaster GN=RpL7 PE=2 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 4.249e-35
Identity = 72/171 (42.11%), Postives = 115/171 (67.25%), Query Frame = 2
Query:  242 KVEDIKRPEQFIKQYRDQELDLIRMKQRGKRSKKVIGKPKSKLLFIIRIQGTSDMHPKTKKILYNLRLRRIFSGVFVRANDGMLEVLQKVEPYVTYGYPNLANVKELIYKKGYATVDRQRIPLTDNNIIEQTLGK-YGIICIEDIVHEIANVCPHFKEVINFLGPLTLNKP 751
            K E++ R E++  +Y   E   I++++  K+  +     ++KL F++RI+G + + PK +K+L   RLR+I +GVF++ N   + +L+  EPY+T+GYPNL +V+ELIYK+G+   +RQR+P+TDN +IE+ L + + I C+ED+VHEI  V P+FK   NFL P  LN P
Sbjct:   50 KKENLVRAEKYQNEYIKAEQREIKLRRLAKKRNQFYVPAEAKLAFVVRIRGINKVAPKVRKVLQLFRLRQINNGVFIKLNKATINMLRIAEPYITWGYPNLKSVRELIYKRGFVKHNRQRVPITDNFVIERKLRQAHQIQCVEDLVHEIFTVGPNFKYASNFLWPFKLNTP 220          
The following BLAST results are available for this feature:
BLAST of CV885189 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
RL7_CHICK3.714e-3940.4560S ribosomal protein L7 OS=Gallus gallus GN=RPL7 ... [more]
RL7_DEBHA1.081e-3840.4960S ribosomal protein L7 OS=Debaryomyces hansenii ... [more]
RL7L_PONAB2.407e-3840.1960S ribosomal protein L7-like 1 OS=Pongo abelii GN... [more]
RL7L_MOUSE2.407e-3838.2560S ribosomal protein L7-like 1 OS=Mus musculus GN... [more]
RL7L_HUMAN5.363e-3840.6560S ribosomal protein L7-like 1 OS=Homo sapiens GN... [more]
RL7_CANGA4.540e-3737.9860S ribosomal protein L7 OS=Candida glabrata GN=RP... [more]
RL7L_PIG4.540e-3739.1760S ribosomal protein L7-like 1 OS=Sus scrofa GN=R... [more]
RL72_PARTE6.556e-3637.6860S ribosomal protein L7 2 OS=Paramecium tetraurel... [more]
RL71_PARTE6.556e-3637.6860S ribosomal protein L7 1 OS=Paramecium tetraurel... [more]
RL7_DROME4.249e-3542.1160S ribosomal protein L7 OS=Drosophila melanogaste... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_013B10_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_013_T3_B10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885189 ID=CV885189; Name=CV885189; organism=Citrus sinensis; type=EST; length=752bp
CCGCCGCTGTCTTTTCCCTTCACTTGAGTTGCATTTTCTCATACAAATCC
TTCTCTCTTCTCTTCTTCTATTCTTTCTTTTCTCTGCAAGCGATATGGCG
GAAGAAGCGGCACAGCAACCGTTAGCTTTTGTGGCGGAAACGGTGCTGAA
GAAAAGAAAAAGCACCGAGGCTTTGGCGCTGACGAGGAAAGCCCAGTTGG
AATTGGGAAAGTATGGCCATGGACAGAAGAACAAGAAGAGCAAAGTTGAG
GATATCAAAAGACCCGAGCAATTTATCAAACAGTATAGGGACCAGGAATT
GGACCTTATCCGAATGAAACAAAGAGGGAAAAGGTCGAAAAAAGTGATCG
GGAAGCCAAAATCTAAGTTGCTTTTTATTATACGCATACAAGGCACAAGT
GATATGCACCCTAAGACTAAGAAGATTCTCTACAACCTTAGATTGAGGAG
AATTTTCAGTGGTGTCTTTGTCAGGGCTAATGATGGTATGTTAGAAGTGC
TGCAAAAGGTGGAGCCATATGTCACATATGGATATCCTAATCTTGCAAAT
GTGAAGGAGCTAATTTACAAGAAGGGTTATGCAACTGTAGATAGGCAAAG
AATTCCTCTCACAGACAATAACATTATTGAACAGACGTTGGGGAAATATG
GCATTATATGCATTGAGGATATAGTACATGAAATAGCCAATGTTTGTCCT
CATTTTAAAGAGGTCATCAACTTTCTGGGTCCTTTAACACTAAACAAGCC
TG
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